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view test-data/pairs_output_merged.stats @ 0:3c87fa1a3b50 draft

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planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
author iuc
date Fri, 05 Apr 2024 10:33:05 +0000
parents
children 6cbca5661205
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total	1184
total_unmapped	8
total_single_sided_mapped	294
total_mapped	882
total_dups	0
total_nodups	882
cis	882
trans	0
pair_types/NU	2
pair_types/UR	38
pair_types/MR	12
pair_types/MU	42
pair_types/UU	810
pair_types/RU	34
pair_types/NR	238
pair_types/MM	8
cis_1kb+	150
cis_2kb+	144
cis_4kb+	140
cis_10kb+	134
cis_20kb+	122
cis_40kb+	122
summary/frac_cis_1kb+	0.17006802721088435
summary/frac_dups	0.0
summary/frac_cis_10kb+	0.15192743764172337
summary/complexity_naive	nan
summary/frac_cis	1.0
summary/frac_cis_2kb+	0.16326530612244897
summary/frac_cis_4kb+	0.15873015873015872
summary/frac_cis_20kb+	0.1383219954648526
summary/frac_cis_40kb+	0.1383219954648526
chrom_freq/Test_seq/Test_seq	882
dist_freq/0-1/+-	0
dist_freq/0-1/-+	0
dist_freq/0-1/--	0
dist_freq/0-1/++	0
dist_freq/1-2/+-	0
dist_freq/1-2/-+	0
dist_freq/1-2/--	0
dist_freq/1-2/++	0
dist_freq/2-3/+-	0
dist_freq/2-3/-+	0
dist_freq/2-3/--	0
dist_freq/2-3/++	0
dist_freq/3-6/+-	0
dist_freq/3-6/-+	0
dist_freq/3-6/--	0
dist_freq/3-6/++	0
dist_freq/6-10/+-	0
dist_freq/6-10/-+	0
dist_freq/6-10/--	0
dist_freq/6-10/++	0
dist_freq/10-18/+-	120
dist_freq/10-18/-+	0
dist_freq/10-18/--	0
dist_freq/10-18/++	0
dist_freq/18-32/+-	2
dist_freq/18-32/-+	0
dist_freq/18-32/--	0
dist_freq/18-32/++	0
dist_freq/32-56/+-	0
dist_freq/32-56/-+	0
dist_freq/32-56/--	0
dist_freq/32-56/++	0
dist_freq/56-100/+-	0
dist_freq/56-100/-+	0
dist_freq/56-100/--	0
dist_freq/56-100/++	0
dist_freq/100-178/+-	0
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dist_freq/562341325+/++	0
chromsizes/Test_seq	450060