pcdl
====

Galaxy wrapper for the pcdl PhysiCell Data Loader command line commands.
Pcdl is paramount for downstream analysis from PhysiCell output.
As such, the pcdl Galaxy tools are useful if you work with the interactive
PhysiCell Studio Galaxy tool.
+ https://usegalaxy.eu/?tool_id=interactive_tool_pcstudio&version=latest

You will have to unzip the PhysiCell output folder before you can run
pcdl Galaxy tools on it.
+ https://usegalaxy.eu/?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Fimgteam%2Funzip%2Funzip%2F6.0%2Bgalaxy0&version=latest
+ https://usegalaxy.org/?tool_id=toolshed.g2.bx.psu.edu%2Frepos%2Frheiland%2Fphysicell_studio%2Finteractive_tool_pcstudio%2F0.3&version=latest

More information about PhysiCell, PhysiCell Studio, and PhysiCell Data Loader
can be found here:
+ https://physicell.org/index.html
+ https://physicell-studio.readthedocs.io/en/latest/index.html
+ https://github.com/elmbeech/physicelldataloader

Date: 2025-06-06
License: BSD-3-Clause
Author: Elmar Bucher
