Mercurial > repos > iuc > pdfimages

annotate pdfimages.xml @ 1:1ba934f8c35b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit bbf307ebb324e2b3278338b2b15672f071c98edc
author iuc
date Mon, 11 Aug 2025 12:29:13 +0000
parents fe8e52e52961
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
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fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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1 <tool name="pdfimages" id="pdfimages" version="@TOOL_VERSION@+@VERSION_SUFFIX@" profile="24.2" license="GPL-2.0-only">
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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2 <description>Extract images from a PDF file</description>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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3 <macros>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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4 <import>macros.xml</import>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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5 </macros>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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6 <expand macro="requirements"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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7 <expand macro="creators"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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8 <command detect_errors="exit_code"><![CDATA[
1
1ba934f8c35b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit bbf307ebb324e2b3278338b2b15672f071c98edc
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9 mkdir ./outputs/ &&
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fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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10 pdfimages
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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11 #if str($f) != ""
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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12 -f $f
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13 #end if
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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14 #if str($l) != ""
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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15 -l $l
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16 #end if
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17 $p
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18 #if $output_format != 'ppm'
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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19 $output_format
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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20 #end if
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1ba934f8c35b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit bbf307ebb324e2b3278338b2b15672f071c98edc
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21 '$input_file' './outputs/$output_prefix'
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22 ]]></command>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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23 <inputs>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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24 <param name="input_file" type="data" format="pdf" label="Input PDF file"/>
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25 <param name="output_format" type="select" label="Select desired image format">
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26 <option value="ppm" selected="true">ppm</option>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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27 <option value="-png">png</option>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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28 <option value="-tiff">tiff</option>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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29 </param>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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30 <param argument="-f" type="integer" min="1" label="First page" optional="true"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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31 <param argument="-l" type="integer" min="1" label="Last page" optional="true"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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32 <param argument="-p" type="boolean" truevalue="-p" falsevalue="" label="Include page numbers in output file names"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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33 <param name="output_prefix" type="text" value="image" label="Output name prefix">
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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34 <validator type="regex" message="Use only letters (A–Z, a–z), numbers, underscores (_), or dashes (-).">^[A-Za-z0-9_-]+$</validator>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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35 </param>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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36 </inputs>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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37 <outputs>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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38 <collection name="ppm_output_collection" type="list" format="ppm" label="${tool.name} on ${on_string}: Extracted images in ppm format">
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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39 <filter>output_format == "ppm"</filter>
1
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iuc
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40 <discover_datasets pattern="(?P&lt;designation&gt;.*).ppm" recurse="true" format="ppm" directory="outputs" />
0
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41 </collection>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
iuc
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42 <collection name="png_output_collection" type="list" format="png" label="${tool.name} on ${on_string}: Extracted images in png">
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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43 <filter>output_format == "-png"</filter>
1
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44 <discover_datasets pattern="(?P&lt;designation&gt;.*).png" recurse="true" format="png" directory="outputs" />
0
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45 </collection>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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46 <collection name="tiff_output_collection" type="list" format="tiff" label="${tool.name} on ${on_string}: Extracted images in tiff format">
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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47 <filter>output_format == "-tiff"</filter>
1
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48 <discover_datasets pattern="(?P&lt;designation&gt;.*).tif" recurse="true" format="tiff" directory="outputs" />
0
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49 </collection>
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50 </outputs>
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51 <tests>
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52 <test expect_num_outputs="1">
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53 <param name="input_file" value="test.pdf"/>
fe8e52e52961 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pdfimages/ commit 6f5af0db756df0cf9cc62dc1d5866a9f10c4346c
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54 <param name="output_format" value="ppm"/>
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55 <param name="p" value="false"/>
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56 <param name="output_prefix" value="image"/>
1
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57 <output_collection name="ppm_output_collection" type="list" count="3">
0
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58 <element name="image-000" ftype="ppm">
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59 <assert_contents>
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60 <has_size value="3145745"/>
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61 </assert_contents>
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62 </element>
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63 <element name="image-001" ftype="ppm">
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64 <assert_contents>
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65 <has_size value="3145745"/>
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66 </assert_contents>
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67 </element>
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68 <element name="image-002" ftype="ppm">
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69 <assert_contents>
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70 <has_size value="3145745"/>
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71 </assert_contents>
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72 </element>
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73 </output_collection>
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74 </test>
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75 <test expect_num_outputs="1">
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76 <param name="input_file" value="test.pdf"/>
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77 <param name="output_format" value="-tiff"/>
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78 <param name="p" value="true"/>
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79 <param name="output_prefix" value="image"/>
1
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80 <output_collection name="tiff_output_collection" type="list" count="3">
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81 <element name="image-001-000" ftype="tiff">
0
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82 <assert_contents>
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83 <has_size value="3149004"/>
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84 </assert_contents>
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85 </element>
1
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86 <element name="image-002-001" ftype="tiff">
0
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87 <assert_contents>
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88 <has_size value="3149004"/>
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89 </assert_contents>
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90 </element>
1
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91 <element name="image-003-002" ftype="tiff">
0
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92 <assert_contents>
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93 <has_size value="1049542"/>
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94 </assert_contents>
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95 </element>
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96 </output_collection>
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97 </test>
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98 <test expect_num_outputs="1">
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99 <param name="input_file" value="test.pdf"/>
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100 <param name="output_format" value="-png"/>
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101 <param name="f" value="1"/>
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102 <param name="l" value="2"/>
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103 <param name="p" value="true"/>
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104 <param name="output_prefix" value="output_prefix-0"/>
1
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105 <output_collection name="png_output_collection" type="list" count="2">
0
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106 <element name="output_prefix-0-001-000" ftype="png" file="output_prefix-0-001-000.png"/>
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107 <element name="output_prefix-0-002-001" ftype="png" file="output_prefix-0-002-001.png"/>
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108 </output_collection>
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109 </test>
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110 </tests>
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111 <help><![CDATA[
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112 **What it does**
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113
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114 `pdfimages` extracts images from a PDF file. This tool is useful for retrieving high-quality embedded images from PDFs for further analysis or reuse.
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115
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116 **Inputs**
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117
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118 - **Input PDF file**: The source PDF from which images will be extracted.
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119 - **Output format**: Choose the desired output format (`ppm`, `png`, or `tiff`).
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120 - **First page / Last page** (optional): Limit extraction to a specific page range.
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121 - **Include page numbers**: Adds page numbers to the output filenames for better traceability.
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122 - **Output name prefix**: Sets a custom prefix for all extracted image files.
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123
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124 **Outputs**
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125
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126 A collection of images in the selected format, named according to the specified prefix and page/image order.
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127 ]]></help>
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128 <expand macro="citations"/>
1
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129 </tool>