diff test-data/img_centroid_16S_aligned_head30.hmm @ 0:6077821e8ae7 draft

planemo upload for repository https://github.com/picrust/picrust2 commit 972784d909912af20cd213fc56830fee79d83ca6
author iuc
date Sat, 04 Mar 2023 20:27:27 +0000
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/img_centroid_16S_aligned_head30.hmm	Sat Mar 04 20:27:27 2023 +0000
@@ -0,0 +1,3680 @@
+HMMER3/f [3.1b2 | February 2015]
+NAME  img_centroid_16S_aligned_head30
+LENG  1219
+MAXL  1483
+ALPH  DNA
+RF    no
+MM    no
+CONS  yes
+CS    no
+MAP   yes
+DATE  Wed Oct 10 17:19:17 2018
+NSEQ  15
+EFFN  1.680908
+CKSUM 4036506208
+STATS LOCAL MSV      -13.3981  0.69577
+STATS LOCAL VITERBI  -14.9113  0.69577
+STATS LOCAL FORWARD   -6.1644  0.69577
+HMM          A        C        G        T   
+            m->m     m->i     m->d     i->m     i->i     d->m     d->d
+  COMPO   1.37152  1.48531  1.23220  1.47755
+          1.26208  1.34388  1.26814  1.74440
+          0.30721  1.43238  3.65865  3.23874  0.04000  0.00000        *
+      1   0.35395  2.43840  2.24483  2.25526     43 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.14543  3.65865  2.21110  1.46634  0.26236  1.09861  0.40547
+      2   2.12949  2.47053  0.36672  2.26761     44 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05789  3.57112  3.57112  1.46634  0.26236  1.83302  0.17427
+      3   1.87475  1.35652  1.96136  0.80211     45 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05789  3.57112  3.57112  1.46634  0.26236  1.83302  0.17427
+      4   1.83494  2.02013  0.70400  1.54583     46 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05789  3.57112  3.57112  1.46634  0.26236  0.38546  1.13987
+      5   2.26480  2.65592  0.30114  2.45412     47 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+      6   2.31076  0.40279  2.41667  1.94391     48 c - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+      7   2.26480  2.65592  0.30114  2.45412     49 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+      8   1.40350  1.84283  0.86745  1.73799     50 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+      9   0.35395  2.43840  2.24483  2.25526     51 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     10   2.31076  0.40279  2.41667  1.94391     52 c - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     11   2.26480  2.65592  0.30114  2.45412     53 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     12   2.26480  2.65592  0.30114  2.45412     54 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     13   2.26480  2.65592  0.30114  2.45412     55 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     14   2.18399  2.01659  2.27039  0.42920     56 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     15   2.26480  2.65592  0.30114  2.45412     57 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     16   0.35395  2.43840  2.24483  2.25526     58 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     17   2.26480  2.65592  0.30114  2.45412     59 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     18   2.18399  2.01659  2.27039  0.42920     60 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     19   0.35395  2.43840  2.24483  2.25526     61 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     20   0.35395  2.43840  2.24483  2.25526     62 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     21   1.79173  1.21347  1.71354  1.03300     63 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     22   1.32707  2.16669  0.74615  1.92414     64 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     23   1.97388  0.88950  2.07752  1.12399     65 c - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     24   1.49580  1.40755  1.17888  1.49805     66 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     25   2.18399  2.01659  2.27039  0.42920     67 t - - -
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+     26   1.33312  1.83427  0.92426  1.71595     68 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     27   2.26480  2.65592  0.30114  2.45412     69 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     28   1.54099  2.05191  0.74951  1.68877     70 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     29   1.12395  1.83995  1.82658  1.03502     71 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.31051  3.65865  1.42231  1.46634  0.26236  1.09861  0.40547
+     30   0.90424  1.89330  1.35760  1.67504     72 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.06794  3.41609  3.41609  1.46634  0.26236  0.19367  1.73687
+     31   0.35395  2.43840  2.24483  2.25526     73 a - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     32   1.37215  1.25103  1.81122  1.21479     74 t - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.11970  3.65865  2.44132  1.46634  0.26236  1.09861  0.40547
+     33   1.76383  0.64638  2.07292  1.72117     75 c - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05646  3.59542  3.59542  1.46634  0.26236  0.46501  0.98920
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+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     35   1.57447  2.28497  0.57576  2.04929     77 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     36   2.14687  0.55357  2.25558  1.59235     78 c - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+     39   1.39629  1.73037  1.15986  1.34041     81 g - - -
+          1.38629  1.38629  1.38629  1.38629
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+     42   0.88306  2.06205  1.21204  1.82200     84 a - - -
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+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     43   1.90426  1.73231  0.65030  1.88189     85 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     47   1.82942  2.41771  0.44802  2.19398     89 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     48   2.26480  2.65592  0.30114  2.45412     90 g - - -
+          1.38629  1.38629  1.38629  1.38629
+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
+     49   2.26480  2.65592  0.30114  2.45412     91 g - - -
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+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+          0.05291  3.65865  3.65865  1.46634  0.26236  1.09861  0.40547
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+          0.35693  1.20338        *  2.84032  0.06018  0.00000        *
+//