--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/plink_output.log	Mon Sep 21 10:09:22 2020 +0000
@@ -0,0 +1,42 @@
+PLINK v1.90p 64-bit (16 Jun 2020)
+Options in effect:
+  --adjust gc log10 qq-plot
+  --assoc mperm=10000 fisher-midp
+  --bfile plink_input/plink_input
+  --logistic perm genedrop perm-count dominant hide-covar beta intercept
+  --make-bed
+  --out plink_output/plink_output
+
+Hostname: p-body.local
+Working directory: /private/var/folders/f7/p887fr2x6hd_jg712040rl580000gn/T/tmp78g2r600/job_working_directory/000/94/working
+Start time: Wed Sep 16 16:43:34 2020
+
+Random number seed: 1600299814
+32768 MB RAM detected; reserving 16384 MB for main workspace.
+50 variants loaded from .bim file.
+200 people (0 males, 200 females) loaded from .fam.
+200 phenotype values loaded from .fam.
+Using up to 11 threads (change this with --threads).
+Before main variant filters, 200 founders and 0 nonfounders present.
+Calculating allele frequencies... done.
+50 variants and 200 people pass filters and QC.
+Among remaining phenotypes, 101 are cases and 99 are controls.
+--make-bed to plink_output/plink_output.bed + plink_output/plink_output.bim +
+plink_output/plink_output.fam ... done.
+Writing C/C --assoc report to plink_output/plink_output.assoc.fisher ...
+done.
+--adjust: Genomic inflation est. lambda (based on median chisq) = 1.22743.
+--adjust values (50 variants) written to
+plink_output/plink_output.assoc.fisher.adjusted .
+10000 max(T) permutations complete.
+Permutation test report written to plink_output/plink_output.assoc.fisher.mperm
+.
+Writing logistic model association results to
+plink_output/plink_output.assoc.logistic ... done.
+--adjust: Genomic inflation est. lambda (based on median chisq) = 1.16136.
+--adjust values (50 variants) written to
+plink_output/plink_output.assoc.logistic.adjusted .
+579 (adaptive) permutations complete.
+Permutation test report written to plink_output/plink_output.assoc.logistic.perm .
+
+End time: Wed Sep 16 16:43:34 2020