Mercurial > repos > iuc > plink
diff test-data/test.vcf @ 0:a98caf1d69ab draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/plink commit 555a851b363c015f26d6fcf1f52bcbf3420a0b3b"
| author | iuc |
|---|---|
| date | Mon, 21 Sep 2020 10:09:22 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test.vcf Mon Sep 21 10:09:22 2020 +0000 @@ -0,0 +1,34 @@ +##fileformat=VCFv4.1 +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered"> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT wgs2 +chr1 500 . C T . . DP=10 GT 1/1 +chr1 1000 . A G . . DP=10 GT 0/1 +chr1 1500 . G A . . DP=10 GT 1/0 +chr1 2000 . G A . . DP=10 GT 1/1 +chr1 2500 . A G . . DP=10 GT 0/1 +chr1 3000 . G C . . DP=10 GT 1/0 +chr1 3500 . G T . . DP=10 GT 1/1 +chr1 4000 . A G . . DP=10 GT 0/1 +chr1 4500 . A C . . DP=10 GT 1/0 +chr1 5000 . A G . . DP=10 GT 1/1 +chr1 5500 . C T . . DP=10 GT 0/1 +chr1 6000 . C A . . DP=10 GT 1/0 +chr1 6500 . C T . . DP=10 GT 1/1 +chr1 7000 . G T . . DP=10 GT 0/1 +chr1 7500 . G C . . DP=10 GT 1/0 +chr1 8000 . T G . . DP=10 GT 1/1 +chr1 8500 . T A . . DP=10 GT 0/1 +chr1 9000 . C T . . DP=10 GT 1/0 +chr1 9500 . G A . . DP=10 GT 1/1 +chr1 10000 . A G . . DP=10 GT 0/1 +chr1 10500 . T C . . DP=10 GT 1/0 +chr1 11000 . A G . . DP=10 GT 1/1 +chr1 11500 . C T . . DP=10 GT 0/1 +chr1 12000 . A G . . DP=10 GT 1/0 +chr1 12500 . C G . . DP=10 GT 1/1 +chr1 13000 . T C . . DP=10 GT 0/1 +chr1 13500 . G T . . DP=10 GT 1/0 +chr1 14000 . A C . . DP=10 GT 1/1 +chr1 14500 . A G . . DP=10 GT 0/1 +chr1 15000 . T G . . DP=10 GT 1/0