view test-data/test.vcf @ 8:16d22eee0fe3 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/plink commit b63133897598f2881de7bad1f18fcd69d7d7e9df"
author iuc
date Thu, 02 Dec 2021 16:20:30 +0000
parents a98caf1d69ab
children
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##fileformat=VCFv4.1
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	wgs2
chr1	500	.	C	T	.	.	DP=10	GT	1/1
chr1	1000	.	A	G	.	.	DP=10	GT	0/1
chr1	1500	.	G	A	.	.	DP=10	GT	1/0
chr1	2000	.	G	A	.	.	DP=10	GT	1/1
chr1	2500	.	A	G	.	.	DP=10	GT	0/1
chr1	3000	.	G	C	.	.	DP=10	GT	1/0
chr1	3500	.	G	T	.	.	DP=10	GT	1/1
chr1	4000	.	A	G	.	.	DP=10	GT	0/1
chr1	4500	.	A	C	.	.	DP=10	GT	1/0
chr1	5000	.	A	G	.	.	DP=10	GT	1/1
chr1	5500	.	C	T	.	.	DP=10	GT	0/1
chr1	6000	.	C	A	.	.	DP=10	GT	1/0
chr1	6500	.	C	T	.	.	DP=10	GT	1/1
chr1	7000	.	G	T	.	.	DP=10	GT	0/1
chr1	7500	.	G	C	.	.	DP=10	GT	1/0
chr1	8000	.	T	G	.	.	DP=10	GT	1/1
chr1	8500	.	T	A	.	.	DP=10	GT	0/1
chr1	9000	.	C	T	.	.	DP=10	GT	1/0
chr1	9500	.	G	A	.	.	DP=10	GT	1/1
chr1	10000	.	A	G	.	.	DP=10	GT	0/1
chr1	10500	.	T	C	.	.	DP=10	GT	1/0
chr1	11000	.	A	G	.	.	DP=10	GT	1/1
chr1	11500	.	C	T	.	.	DP=10	GT	0/1
chr1	12000	.	A	G	.	.	DP=10	GT	1/0
chr1	12500	.	C	G	.	.	DP=10	GT	1/1
chr1	13000	.	T	C	.	.	DP=10	GT	0/1
chr1	13500	.	G	T	.	.	DP=10	GT	1/0
chr1	14000	.	A	C	.	.	DP=10	GT	1/1
chr1	14500	.	A	G	.	.	DP=10	GT	0/1
chr1	15000	.	T	G	.	.	DP=10	GT	1/0