Mercurial > repos > iuc > plink
view test-data/out.assoc.logistic @ 0:a98caf1d69ab draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/plink commit 555a851b363c015f26d6fcf1f52bcbf3420a0b3b"
| author | iuc |
|---|---|
| date | Mon, 21 Sep 2020 10:09:22 +0000 |
| parents | |
| children |
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CHR SNP BP A1 TEST NMISS BETA STAT P 1 snp0 0 A DOM 200 0.2307 0.7225 0.47 1 snp0 0 A INTERCEPT 200 -0.1484 NA NA 1 snp1 1 A DOM 200 -0.3807 -1.185 0.2359 1 snp1 1 A INTERCEPT 200 0.2985 NA NA 1 snp2 2 A DOM 200 -0.2859 -0.8822 0.3777 1 snp2 2 A INTERCEPT 200 0.2318 NA NA 1 snp3 3 B DOM 200 0.34 1.049 0.2942 1 snp3 3 B INTERCEPT 200 -0.2318 NA NA 1 snp4 4 B DOM 200 -0.278 -0.8685 0.3851 1 snp4 4 B INTERCEPT 200 0.2231 NA NA 1 snp5 5 B DOM 200 0.3479 1.059 0.2895 1 snp5 5 B INTERCEPT 200 -0.2412 NA NA 1 snp6 6 A DOM 200 -0.1934 -0.5824 0.5603 1 snp6 6 A INTERCEPT 200 0.1671 NA NA 1 snp7 7 A DOM 200 0.02564 0.07511 0.9401 1 snp7 7 A INTERCEPT 200 -4.356e-07 NA NA 1 snp8 8 B DOM 200 0.3263 1.031 0.3024 1 snp8 8 B INTERCEPT 200 -0.2151 NA NA 1 snp9 9 A DOM 200 -0.02257 -0.07127 0.9432 1 snp9 9 A INTERCEPT 200 0.03637 NA NA 1 snp10 10 B DOM 200 -0.08004 -0.2449 0.8065 1 snp10 10 B INTERCEPT 200 0.08004 NA NA 1 snp11 11 B DOM 200 -0.02257 -0.07126 0.9432 1 snp11 11 B INTERCEPT 200 0.03637 NA NA 1 snp12 12 B DOM 200 0.3972 1.215 0.2244 1 snp12 12 B INTERCEPT 200 -0.2763 NA NA 1 snp13 13 A DOM 200 -0.6692 -2.01 0.04445 1 snp13 13 A INTERCEPT 200 0.5213 NA NA 1 snp14 14 B DOM 200 -0.2301 -0.7156 0.4743 1 snp14 14 B INTERCEPT 200 0.1892 NA NA 1 snp15 15 A DOM 200 0.4455 1.369 0.1711 1 snp15 15 A INTERCEPT 200 -0.3102 NA NA 1 snp16 16 A DOM 200 -0.07146 -0.2268 0.8206 1 snp16 16 A INTERCEPT 200 0.07146 NA NA 1 snp17 17 B DOM 200 -0.5592 -1.692 0.0906 1 snp17 17 B INTERCEPT 200 0.4383 NA NA 1 snp18 18 B DOM 200 0.3263 1.031 0.3024 1 snp18 18 B INTERCEPT 200 -0.2151 NA NA 1 snp19 19 A DOM 200 -0.1312 -0.4039 0.6863 1 snp19 19 A INTERCEPT 200 0.1178 NA NA 1 snp20 20 A DOM 200 -0.4977 -1.522 0.1281 1 snp20 20 A INTERCEPT 200 0.3895 NA NA 1 snp21 21 A DOM 200 -0.4155 -1.241 0.2146 1 snp21 21 A INTERCEPT 200 0.3365 NA NA 1 snp22 22 A DOM 200 -0.5122 -1.544 0.1226 1 snp22 22 A INTERCEPT 200 0.4055 NA NA 1 snp23 23 B DOM 200 -0.07411 -0.2325 0.8161 1 snp23 23 B INTERCEPT 200 0.07411 NA NA 1 snp24 24 A DOM 200 -0.07696 -0.2386 0.8114 1 snp24 24 A INTERCEPT 200 0.07696 NA NA 1 snp25 25 A DOM 200 0.1814 0.5653 0.5719 1 snp25 25 A INTERCEPT 200 -0.1133 NA NA 1 snp26 26 B DOM 200 -0.237 -0.7277 0.4668 1 snp26 26 B INTERCEPT 200 0.1967 NA NA 1 snp27 27 A DOM 200 0.127 0.4031 0.6869 1 snp27 27 A INTERCEPT 200 -0.07146 NA NA 1 snp28 28 B DOM 200 0.2135 0.7029 0.4821 1 snp28 28 B INTERCEPT 200 -0.1252 NA NA 1 snp29 29 B DOM 200 -0.06669 -0.216 0.829 1 snp29 29 B INTERCEPT 200 0.06669 NA NA 1 snp30 30 A DOM 200 -0.1269 -0.3957 0.6924 1 snp30 30 A INTERCEPT 200 0.1133 NA NA 1 snp31 31 B DOM 200 -0.4507 -1.372 0.17 1 snp31 31 B INTERCEPT 200 0.3567 NA NA 1 snp32 32 B DOM 200 0.3263 1.031 0.3024 1 snp32 32 B INTERCEPT 200 -0.2151 NA NA 1 snp33 33 A DOM 200 -0.4069 -1.301 0.1934 1 snp33 33 A INTERCEPT 200 0.3075 NA NA 1 snp34 34 B DOM 200 0.1289 0.4045 0.6859 1 snp34 34 B INTERCEPT 200 -0.07411 NA NA 1 snp35 35 B DOM 200 0.246 0.7409 0.4587 1 snp35 35 B INTERCEPT 200 -0.1671 NA NA 1 snp36 36 A DOM 200 -0.4611 -1.463 0.1435 1 snp36 36 A INTERCEPT 200 0.3483 NA NA 1 snp37 37 A DOM 200 0.1782 0.5619 0.5742 1 snp37 37 A INTERCEPT 200 -0.1092 NA NA 1 snp38 38 B DOM 200 -0.3711 -1.169 0.2424 1 snp38 38 B INTERCEPT 200 0.2877 NA NA 1 snp39 39 B DOM 200 -0.2179 -0.6934 0.488 1 snp39 39 B INTERCEPT 200 0.1759 NA NA 1 snp40 40 B DOM 200 0.2907 0.8926 0.3721 1 snp40 40 B INTERCEPT 200 -0.1967 NA NA 1 snp41 41 B DOM 200 -0.1358 -0.4125 0.6799 1 snp41 41 B INTERCEPT 200 0.1226 NA NA 1 snp42 42 B DOM 200 -0.237 -0.7277 0.4668 1 snp42 42 B INTERCEPT 200 0.1967 NA NA 1 snp43 43 A DOM 200 0.2307 0.7225 0.47 1 snp43 43 A INTERCEPT 200 -0.1484 NA NA 1 snp44 44 A DOM 200 0.4929 1.521 0.1284 1 snp44 44 A INTERCEPT 200 -0.3429 NA NA 1 snp45 45 A DOM 200 -0.6426 -1.892 0.05845 1 snp45 45 A INTERCEPT 200 0.5108 NA NA 1 snp46 46 A DOM 200 0.1889 0.5734 0.5663 1 snp46 46 A INTERCEPT 200 -0.1226 NA NA 1 snp47 47 B DOM 200 0.02857 0.09259 0.9262 1 snp47 47 B INTERCEPT 200 -4.27e-07 NA NA 1 snp48 48 B DOM 200 -0.4383 -1.353 0.1762 1 snp48 48 B INTERCEPT 200 0.3429 NA NA 1 snp49 49 A DOM 200 -0.06899 -0.2213 0.8249 1 snp49 49 A INTERCEPT 200 0.06899 NA NA