Mercurial > repos > iuc > polypolish
annotate test-data/logfile_test_4.log @ 1:bd2a15dbcea1 draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit afc3449a0b68d43fd1179543815dfe23b951e157
author | iuc |
---|---|
date | Fri, 20 Oct 2023 12:41:27 +0000 |
parents | aaa868913641 |
children |
rev | line source |
---|---|
0
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
1 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
2 [1;4;93mStarting Polypolish[0m [2m(2022-09-14 14:06:52)[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
3 [2m Polypolish is a tool for polishing genome assemblies with short reads. |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
4 Unlike other tools in this category, Polypolish uses SAM files where each read |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
5 has been aligned to all possible locations (not just a single best location). |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
6 This allows it to repair errors in repeat regions that other alignment-based |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
7 polishers cannot fix.[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
8 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
9 Polypolish version: 0.5.0 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
10 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
11 Input assembly: |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
12 input_data |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
13 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
14 Input short-read alignments: |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
15 paired_collection/forward_input0forward_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
16 paired_collection/forward_input1forward_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
17 paired_collection/forward_input2forward_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
18 paired_collection/reverse_input0reverse_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
19 paired_collection/reverse_input1reverse_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
20 paired_collection/reverse_input2reverse_filtered.sam |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
21 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
22 Settings: |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
23 --fraction_invalid 0.2 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
24 --fraction_valid 0.5 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
25 --max_errors 10 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
26 --min_depth 5 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
27 --debug /tmp/tmpacfaqf7s/job_working_directory/000/20/outputs/galaxy_dataset_a267d150-242f-43e2-b91d-3a230d92a70f.dat |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
28 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
29 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
30 [1;4;93mLoading assembly[0m [2m(2022-09-14 14:06:52)[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
31 contig00001 (5,513 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
32 contig00002 (3,532 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
33 contig00003 (3,227 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
34 contig00004 (3,138 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
35 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
36 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
37 [1;4;93mLoading alignments[0m [2m(2022-09-14 14:06:52)[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
38 paired_collection/forward_input0forward_filtered.sam: 75 alignments from 72 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
39 paired_collection/forward_input1forward_filtered.sam: 75 alignments from 72 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
40 paired_collection/forward_input2forward_filtered.sam: 75 alignments from 72 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
41 paired_collection/reverse_input0reverse_filtered.sam: 64 alignments from 62 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
42 paired_collection/reverse_input1reverse_filtered.sam: 64 alignments from 62 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
43 paired_collection/reverse_input2reverse_filtered.sam: 64 alignments from 62 reads |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
44 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
45 Filtering for high-quality end-to-end alignments: |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
46 144 alignments kept |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
47 273 alignments discarded |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
48 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
49 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
50 [1;4;93mPolishing assembly sequences[0m [2m(2022-09-14 14:06:52)[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
51 [2m For each position in the assembly, Polypolish determines the read depth |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
52 at that position and collects all aligned bases. It then polishes the assembly |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
53 by looking for positions where the pileup unambiguously supports a different |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
54 sequence than the assembly.[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
55 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
56 Polishing contig00001 (5,513 bp): |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
57 mean read depth: 5.7x |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
58 1,751 bp have a depth of zero (68.2387% coverage) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
59 0 positions changed (0.0000% of total positions) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
60 estimated pre-polishing sequence accuracy: 100.0000% |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
61 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
62 Polishing contig00002 (3,532 bp): |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
63 mean read depth: 2.0x |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
64 2,280 bp have a depth of zero (35.4473% coverage) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
65 0 positions changed (0.0000% of total positions) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
66 estimated pre-polishing sequence accuracy: 100.0000% |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
67 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
68 Polishing contig00003 (3,227 bp): |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
69 mean read depth: 0.8x |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
70 2,652 bp have a depth of zero (17.8184% coverage) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
71 0 positions changed (0.0000% of total positions) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
72 estimated pre-polishing sequence accuracy: 100.0000% |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
73 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
74 Polishing contig00004 (3,138 bp): |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
75 mean read depth: 0.6x |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
76 2,699 bp have a depth of zero (13.9898% coverage) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
77 0 positions changed (0.0000% of total positions) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
78 estimated pre-polishing sequence accuracy: 100.0000% |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
79 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
80 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
81 [1;4;93mFinished![0m [2m(2022-09-14 14:06:52)[0m |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
82 Polished sequence (to stdout): |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
83 contig00001_polypolish (5,513 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
84 contig00002_polypolish (3,532 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
85 contig00003_polypolish (3,227 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
86 contig00004_polypolish (3,138 bp) |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
87 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
88 Per-base debugging info written to /tmp/tmpacfaqf7s/job_working_directory/000/20/outputs/galaxy_dataset_a267d150-242f-43e2-b91d-3a230d92a70f.dat |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
89 Time to run: 0:00:00.024238 |
aaa868913641
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 95f351736787f04c65e830cd9daf9c9c8521893a
iuc
parents:
diff
changeset
|
90 |