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comparison macro.xml @ 2:f355085dd2aa draft default tip

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planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/polypolish commit 2a8a85c8b08a62edbd11c34126753192baf6da66
author iuc
date Thu, 11 Jan 2024 16:44:56 +0000
parents bd2a15dbcea1
children
comparison
equal deleted inserted replaced
1:bd2a15dbcea1 2:f355085dd2aa
1 1
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">0.5.0</token> 3 <token name="@TOOL_VERSION@">0.5.0</token>
4 <token name="@VERSION_SUFFIX@">1</token> 4 <token name="@VERSION_SUFFIX@">2</token>
5 <token name="@PROFILE@">21.05</token> 5 <token name="@PROFILE@">21.05</token>
6 <token name="@THREADS@">\${GALAXY_SLOTS:-7}</token> 6
7 <token name="@THREADS@"><![CDATA[
8 ##compute the number of ADDITIONAL threads to be used by samtools (-@)
9 addthreads=\${GALAXY_SLOTS:-1} && (( addthreads-- )) &&
10 ]]></token>
11
7 <xml name="version_command"> 12 <xml name="version_command">
8 <version_command><![CDATA[polypolish -V]]></version_command> 13 <version_command><![CDATA[polypolish -V]]></version_command>
9 </xml> 14 </xml>
10 <xml name="xrefs"> 15 <xml name="xrefs">
11 <xrefs> 16 <xrefs>
13 </xrefs> 18 </xrefs>
14 </xml> 19 </xml>
15 <xml name="requirements"> 20 <xml name="requirements">
16 <requirements> 21 <requirements>
17 <requirement type="package" version="@TOOL_VERSION@">polypolish</requirement> 22 <requirement type="package" version="@TOOL_VERSION@">polypolish</requirement>
18 <requirement type="package" version="1.13">samtools</requirement> 23 <requirement type="package" version="1.19">samtools</requirement>
19 </requirements> 24 </requirements>
20 </xml> 25 </xml>
21 <xml name="citations"> 26 <xml name="citations">
22 <citations> 27 <citations>
23 <citation type="doi">10.1371/journal.pcbi.1009802</citation> 28 <citation type="doi">10.1371/journal.pcbi.1009802</citation>