Mercurial > repos > iuc > poretools_extract

comparison poretools_extract.xml @ 2:08064da7b7fb draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit 506782d1e671505617ff539e6811fcdcc2c02cd5
author iuc
date Fri, 27 Sep 2024 07:54:12 +0000
parents 7593f94691fb
children
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1:7e4f1ed70187 2:08064da7b7fb
1 <?xml version="1.0"?> 1 <tool id="poretools_extract" name="Extract reads" version="@VERSION@.0" profile="@PROFILE@">
2 <tool id="poretools_extract" name="Extract reads" version="@VERSION@.0">
3 <description>in FASTA or FASTQ format from nanopore files</description> 2 <description>in FASTA or FASTQ format from nanopore files</description>
4 <macros> 3 <macros>
5 <import>macros.xml</import> 4 <import>macros.xml</import>
6 </macros> 5 </macros>
6 <expand macro="bio_tools"/>
7 <expand macro="requirements" /> 7 <expand macro="requirements" />
8 <command detect_errors="aggressive"> 8 <command detect_errors="aggressive">
9 <![CDATA[ 9 <![CDATA[
10 poretools $output_format --type $type --min-length $min_length --max-length $max_length 10 poretools $output_format --type $type --min-length $min_length --max-length $max_length
11 $quality 11 $quality