Mercurial > repos > iuc > poretools_occupancy
diff poretools_occupancy.xml @ 1:338d15b8d6fb draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit d50758dbe64462ba3cdcb7f1df0bcc57a310deab"
author | iuc |
---|---|
date | Sun, 19 Jan 2020 09:09:55 -0500 |
parents | 336791b5665f |
children | 0433aad600e9 |
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--- a/poretools_occupancy.xml Tue Dec 19 14:47:30 2017 -0500 +++ b/poretools_occupancy.xml Sun Jan 19 09:09:55 2020 -0500 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="poretools_occupancy" name="Plot performance" version="@VERSION@.0"> +<tool id="poretools_occupancy" name="Plot performance" version="@VERSION@.1"> <description>per cell in nanopore reads</description> <macros> <import>macros.xml</import> @@ -7,12 +7,13 @@ <expand macro="requirements" /> <command detect_errors="aggressive"> <![CDATA[ - poretools occupancy - '$input' - --saveas occupancy.$extension - --plot-type $plot_type - && - mv occupancy.$extension '$output' +@MPLBACKEND@ +poretools occupancy + '$input' + --saveas occupancy.$extension + --plot-type $plot_type +&& +mv occupancy.$extension '$output' ]]> </command> <inputs> @@ -35,13 +36,13 @@ <expand macro="test_input" /> <param name="extension" value="png" /> <param name="plot_type" value="read_count" /> - <output name="output" file="poretools-occupancy-out1.png" ftype="png" lines_diff="420" /> + <output name="output" file="poretools-occupancy-out1.png" ftype="png" compare="sim_size" /> </test> <test> <expand macro="test_input" /> <param name="extension" value="pdf" /> <param name="plot_type" value="total_bp" /> - <output name="output" file="poretools-occupancy-out1.pdf" ftype="pdf" lines_diff="36" /> + <output name="output" file="poretools-occupancy-out1.pdf" ftype="pdf" lines_diff="384" /> </test> </tests> <help>