Mercurial > repos > iuc > poretools_occupancy

view test-data/poretools-extract-out1.fasta @ 0:336791b5665f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit aee00b3755588862ab34c199c28578706c004a34
author iuc
date Tue, 19 Dec 2017 14:47:30 -0500
parents
children
line wrap: on
line source

>b7b29e94-0894-415c-87c4-a809bc8e8bdb_Basecall_2D_2d CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read95_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read95_strand.fast5
GAAATTGCTGGTTGCTCCCCGAGGGGCCTATAAACAATCGGATAAGGGTCTAAGTCAGGGCGAAAAAGATTTGGGGGCTCCTAATCTCCGATAATGAGTGCCGCAACATACGGATAGTACCTTTATGCGTAACCGCTCCATACGACAAATAATTATTTATATACGGTACCTACGGAACCAAAATTGACAAGTTCGTACTTTT
>b7b29e94-0894-415c-87c4-a809bc8e8bdb_Basecall_2D_complement CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read95_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read95_strand.fast5
ATCGACCATATTGGCTTTTTGGTTATCCTGGTCTACCTCTTGTTGTCTTGGTGGGTGCCAACAGCTATGCATCTGTTGCATCAATCGTGACGGGAAACGAGAGGACAATTTCCCGGGTTAAACATGCCGATTGTCAGCCGCGGGGGCTGGGGAGGTTCC
>b7b29e94-0894-415c-87c4-a809bc8e8bdb_Basecall_2D_template CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read95_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read95_strand.fast5
CTTCTGTTGTGGTGCTCTTGCTCCCCAGGGGCCTATAAACGTGCACATAGGGTCTAAGTCAGCGAAAAAGATTTGAGGCTCCCGTATAGATAATGGATCCCCTCAGCCCTAGCTGACCGTCATCCGTAACGCCTCCATACATAAATAATTATTTAGCTCTAGTACACCCAGGCGGATCGCTTCTGGTTTTATATTTCTTGATTACTGATGCA
>935c5941-a78e-4959-923e-f71157063e92_Basecall_2D_2d CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read430_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read430_strand.fast5
GCTTCTTCTGCTTATATTGCTTAGAAGGAAATACGAGAGGAGAAAGAGTAGATGATGATAAAGGGTCGACTAATTATTTCCGAAGTTTGTTAAAGTCGAAATCGCTTCGAATTTGAAATTGTTGCTGACGCAAGTTAGCGATGCGCGATCCCAGGAGTATAGGGGTTGAAAACGGTTCCATTTGATAAGGTTTTCCATTAATGACGTCACGTTGTTTGGTATTTCCTTCTATTTTCTCCGAAGCGCCCCTCTCTCTCTCATCTCACGTCAGATTCAATTTTATTACAACAAATGTGAAAAGTGGGTTCGCAGAGGTCGCTTAAGCCATTTTCTTAGATACAGCTTGAAAACGAATCTACAGAACAAATCTCCTGCCATTACACTCAGAGTCATGACGGTCGTGTTTATAGAGT
>935c5941-a78e-4959-923e-f71157063e92_Basecall_2D_complement CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read430_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read430_strand.fast5
ACTCTAACTCAGGCTGGTATCTGAGTGTAATGGCGCAGTTGTCTGTAGGGTCGTTCAAGCTGTATCAAGAAATGAGTAAGCGAAAACCTGCGAGCCGATTTTCGCTTTGTTTAGTAAGGTTAGTGACGTGAGGGTGAGAGAGAGAGAGAGCGTTCGGAGAAAATAGAAGGAGAACCCAAACAACGTGACGTCATTGATGAAAACCTTATCGGGAACCCGTTTCAACCCCTATACTCCTCGGCGCGTAGGCTAACTGCGTAGCAACATTCAATTCAGCAGTTTTCCTGTCAGCGACTTCGGAAGCTTAGTCAACAGTGTTTATCAGCTCCTCTTCCTCTCGTATTTCGTTCAAGCAATATAGCAGAGGCGCCTGTCC
>935c5941-a78e-4959-923e-f71157063e92_Basecall_2D_template CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch128_read430_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch128_read430_strand.fast5
CATTCTTTGGTGCTGATCCTGCGAGGAGAGGGGGAGGGGAACAATGGTAGCCACTAAATCTATAACAATTATTTCAGAAGTTGTCCGCTTGAATCATTCATTTGAAATTGTTAGTGACGCAAGTTAATGCGCGATCCCAGGAGCGGGCTCGTCCAGTTTACAATTGTCCATGCGTAGTCAGTTGTTATGTTGATTCCTGTTACCGATAGGGTATATAACGCTCCTAGTCGATTCGATTTGCTTGGCGCCATCCAAGTATTCCAGAGTCCTTAGCATTTTCTTAATGGCACGTGAAAACGAATCCCCTAAGAGCCACTTATCACGTCCGATTACATACTCCAGTCATGACGCTTCTGTTTATGTTTCTTAACCA
>e643ceef-570f-4ba7-bdae-e9e78da71703_Basecall_2D_2d CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read1377_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read1377_strand.fast5
ATGTTTCTTCAGTGATACCTGTGACATCCGGAAAGGAGGAGGAGGATCAGAAAGGAGGAGTGTGACATAACGCTGACAGTGCGTGCTTAGGTTCGTTAATAAACAAAGCCATATTACGGAGATGGCGTAATCACCTACGATGAAAGTGGTCACGTACGCGTGCCACCTGGGCATCGTCCTCACCCCTTCATTAAATTACAGGCTTTTGACTCCTTCAACCTTCTCGTTGTAATTGGTTAGTACTTATCCTATCTTATTCGCGATCGGCGTTCGATTGGATTTCGCTTCGAATGTAATCCGTATGCGCAATACAAATATTTGAGCTAATTTCCTCTCTTTACGTAATCGTTTTCGTCACCGTCGTCAATTATCGATACGGGAATCAAGTCGAACGAACCCCTGACCGAGAATCAGAAAAACTTTCAGAAGAAAAAGGAAGAAGAGAAAGCTCTTTCACATTGTAAACCAAACGCGAAAGCTCCCGAAAACAAAGGGCGGCGATTCTAAACATTTGGTTTATGTT
>e643ceef-570f-4ba7-bdae-e9e78da71703_Basecall_2D_complement CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read1377_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read1377_strand.fast5
GAACACAACTGTTTCCCAGTACACGCTTTGTTTAAGCTTTCGCGTTGGTTCCATGTGAAGAGCTTCTGTTCTTCCTTTTTTGGTATGAAAGTTTTAGTTCTCTTCAGAGTCGTCCCACTTGATGTCCCGTATCGCTTGTGGACATTGTAGAAATGATCGTAAGGGCAGAGGAATTAATTAAAACTTTGTGGTGCCATCCCATTACGGTCGAGCGAATCCAGTAGCACCAGTACCCAGTAAGAACGAACCCTGAGCCAATTACACAGAAGGTTGAAGGAGTCAAGCTGTAGTTGGAAGGGGTGAAGGTCCGCACAAGATTCGATCCTCGTTATCGTACCTGATTACACATCTCTGCGTGATATGATGATTCTTTATTAGCAACCGAGCACGCACTGTTGGCGTTATGTTCGGATACTACGGTCTATCCTCTCAAACGGTCCAGCTCCCAACATCGGCGTCAGTCA
>e643ceef-570f-4ba7-bdae-e9e78da71703_Basecall_2D_template CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read1377_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read1377_strand.fast5
TTGTGTTTCTTCTTATGACTTGCTATGCGCAGGGGGGAGGAGAGATGTAGCGGAGGGCAGAGTGTGAAAGGGGTAGTTCATTATGCTGTCGTTAAGCCTCCGGGGCTATTGAAAACGATGAATGGGGCCAGGCGCTGGTCACGTACACGTGCGACACTGATGAAACGTTCCTCACCATTCATTAAATTACCGGCTTTTAAACGTGAACATGCTGTTGTAATTCTTCATGGTGGTGTAATGTACTTAGCAGTAGCGTTCAATTGGATTTCGCTTCGAATGTAGTCGATCTGCGCATCCACTGGTCGACGATTTCCTCTCTTTACTGATCGTAGTTCGTCACGTCGTCGTACGATAGGATCAAAGTCGCGGGATGGCTATCCCCGGGCGAACTTTCCAGAGAAGGAAGAAGAAAGACCTTTCGGCTTGTAGTAAGACCCCGAAGACTCGAAAACAGGGCAACGCGAATTCCACTTCGTTATGTTCTTACTATTGGA
>2f378243-7a3f-4584-bfb6-6800def37547_Basecall_2D_2d CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read326_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read326_strand.fast5
CATGTTTCTGCTGATATTGCTAATGGCTGAACTGGAAATAAGGATCCGTTGCTTGCCAACAACTATACTGCGTGGTATTTTCCCAGTGGAAAGATCGGGAACCTTTGATCTTCAATATAGTTACAATTGGTGGTCGTGATTTTAATCCCAGTTCATCCTTATTTTGGGTATAACAGGATGAGGAGGACGATTCGAAGTCACGATCATGCGCCCAAGTCAGAATGACTCCACACTACTCCTCCTCAGGACCATTTATAAATAAACAGTGATCAAGATTCCAACAATTAAGATGGCTTGAAACCAATTTCTGCTCTTGTTTTTGTTCCCACTCCCCCCTCCCCCCGAGGTCAGGATGAAGTATTAACTCTGAAGATAAAGGACCCCACGACGACAACGGCTTCCAGTTACTTCGAAGGCATTTTTCTACTTCTACTTCCCCTCCGTCTCATCCTCCTCCTCAGCTACCAAATTCACAATAGGACCGCAGGAAAAGTCTGTAGCGAATAGAACCTTCTTCACTACGGTTTCGTACCTAAAATGTTCTGGAAAAATGGATAGAAAAGAATCTTTTAAAATCGAAATCCGATTTTCGGAGTGTTAACAATGTAACTGTTGTAGAAAAGGAGCGGTAAATGAGACGTGGGGAATAAGATACAGAGCAACCACTGTCGTTAAGGACCGTTTGAGTGTTT
>2f378243-7a3f-4584-bfb6-6800def37547_Basecall_2D_complement CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read326_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read326_strand.fast5
ACACTAGCATCTGTCTGGCCCCGATATTTGTAGTATGTACTTTACGTGTACTGTTACTATGGTATTTTCACCCTCAGTTTGCCCTTGTCACTCGAAAGTCGAATTCAGTGTTTTAAAAGATTGTCTGGTTCTATCGGTTCCGAGCAGTTTTAATAGAACTGATCAATGAAGAAGGTTCGTTCGAGCGAACTTCCAGTGATCTTGTGAATTTGAGCTGAGGAGGAGATGAAAGAGGGAAGTAGAAGTAGAAAAATTGCATCGAAATATGGAATAAATTGTATCGTCGGTCTTGCTTTTATCTGTCAGTTATACTTCAGTAGGAGGGAGTGGGATAACGACAGCAATTAGTTCAGCCTTAGTGTTGAGGAATCTGGTTCTTTAACATCTTTGGTGGGAGGAGTGTCCTTGATTTAATATGCAGAAGTATCCTTGCTGCGAATCGTCATCATCCTTTAACAATAGGATGAAAACCGTTAAAATGCCGACAGTTGGACCTGCGAGCCGCCGGCCCGTATTCATGGGAAAGTACCGCATTAACGTGTGTCAGGCGGGACGTATTATTTCCCGTTCAGCCGATTAAGTATACAGGCACAGAGACTTCC
>2f378243-7a3f-4584-bfb6-6800def37547_Basecall_2D_template CPHG_CNU4299G4G_louse_library_2016_3_4_3507_1_ch126_read326_strand .poretools_tmp/test-data/2016_3_4_3507_1_ch126_read326_strand.fast5
GTATTTCTTATGATATTAGATGTAGGCTGGAAATAGAATGCGTGCTTTACAGGCCTCCTCTGCGTATGTTTCCATGGAAGCCGTAGGAACCTTTGATCTTCATACTTGCCCTATTGGTGGTCGTGATTTTAATCCCAGTTCATCCTTATTTGATATAACAGGATACGGAAAGAGTTCGAAGTCGAATCGTCCAGCAAGTCGAATGACTCTAAAGACATCGGCACGGCCTTTGAGGCTCGTATATGCCTAATTCCAACAATGCAAAGTACGTGGAACAGATTTCTGCTCTTTTTTGTTCCACTCCGCCAGCCCCCCGAGGTCAGGATGAAATATTACTCTGAAAACCGCCAACCCACGGGACAGCTACGTCGAATGTCGTCGAACAGTTCTATTCCTTCCCCTCCGTTAGTACTACTCTAGGCTACTCAATTCAGGCGATAGAAGGAAAAGTCTGTACCAGGCGGGTTCTTCGGCTTTTCAATGCGCGCTGTTCTGGGGAGCTATCGCTGCAAAGAATCTTTTAAAATCGAGTCGAGTTTTCAGAGTGTTCCTCAATGTAACTGTTGGCAAAGGAGCGGGCCTGGCAGACGTGGGGAATAAGACCCCAAAACCACTTCGTGCACATCGTTCTGGTGTTCATCTGTTCTTAGCTCTTGT