Mercurial > repos > iuc > poretools_squiggle

diff macros.xml @ 2:26e6c9362b7b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit 506782d1e671505617ff539e6811fcdcc2c02cd5
author iuc
date Fri, 27 Sep 2024 07:56:56 +0000
parents 34553d0caa5e
children
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--- a/macros.xml	Sun Jan 19 09:09:16 2020 -0500
+++ b/macros.xml	Fri Sep 27 07:56:56 2024 +0000
@@ -6,7 +6,13 @@
             <yield />
         </requirements>
     </xml>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">poretools</xref>
+        </xrefs>
+    </xml>
     <token name="@VERSION@">0.6.1a1</token>
+    <token name="@PROFILE@">23.1</token>
     <xml name="citations">
         <citations>
             <citation type="doi">10.1093/bioinformatics/btu555</citation>
@@ -19,7 +25,7 @@
             <option value="svg">SVG</option>
             <yield />
         </param>
-        <param name="theme_bw" argument="--theme-bw" type="boolean" truevalue="--theme-bw" falsevalue="" label="Use a monochrome color scheme" />
+        <param argument="--theme-bw" type="boolean" truevalue="--theme-bw" falsevalue="" label="Use a monochrome color scheme" />
     </xml>
     <xml name="image_output">
         <data name="output" format="png">
@@ -31,7 +37,7 @@
         </data>
     </xml>
     <xml name="stat_options">
-        <param name="type" argument="--type" type="select" label="Filter by type of read">
+        <param argument="--type" type="select" label="Filter by type of read">
             <option value="all" selected="true">All</option>
             <option value="fwd">Forward reads</option>
             <option value="rev">Reverse reads</option>
@@ -44,9 +50,8 @@
         <param name="input" ftype="fast5.tar" value="poretools-in1.tar.bz2" />
     </xml>
     <xml name="length_options">
-        <param name="min_length" argument="--min-length" type="integer" value="0" label="Minimum read length" />
-        <param name="max_length" argument="--max-length" type="integer" value="1000000000" label="Maximum read length" />
+        <param argument="--min-length" type="integer" value="0" label="Minimum read length" />
+        <param argument="--max-length" type="integer" value="1000000000" label="Maximum read length" />
     </xml>
     <token name="@MPLBACKEND@"><![CDATA[export MPLBACKEND="agg" &&]]></token>
-    <token name="@profile@">18.09</token>
 </macros>