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comparison poretools_times.xml @ 2:107124859931 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/poretools commit 506782d1e671505617ff539e6811fcdcc2c02cd5
author iuc
date Fri, 27 Sep 2024 07:46:46 +0000
parents e5072f0d3772
children
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1:960be5e0b47e 2:107124859931
1 <?xml version="1.0"?> 1 <tool id="poretools_times" name="Extract time" version="@VERSION@.0" profile="@PROFILE@">
2 <tool id="poretools_times" name="Extract time" version="@VERSION@.0">
3 <description>and channel information from a set of FAST5 files</description> 2 <description>and channel information from a set of FAST5 files</description>
4 <macros> 3 <macros>
5 <import>macros.xml</import> 4 <import>macros.xml</import>
6 </macros> 5 </macros>
6 <expand macro="bio_tools"/>
7 <expand macro="requirements" /> 7 <expand macro="requirements" />
8 <command detect_errors="aggressive"> 8 <command detect_errors="aggressive">
9 <![CDATA[ 9 <![CDATA[
10 poretools times --utc '$input' > '$output' 10 poretools times --utc '$input' > '$output'
11 ]]> 11 ]]>
17 <data name="output" format="tabular" /> 17 <data name="output" format="tabular" />
18 </outputs> 18 </outputs>
19 <tests> 19 <tests>
20 <test> 20 <test>
21 <expand macro="test_input" /> 21 <expand macro="test_input" />
22 <param name="types" value="fwd" />
23 <param name="detailed" value="true" />
24 <output name="output" file="poretools-times-out1.tabular" ftype="tabular" /> 22 <output name="output" file="poretools-times-out1.tabular" ftype="tabular" />
25 </test>
26 <test>
27 <expand macro="test_input" />
28 <param name="types" value="rev" />
29 <param name="detailed" value="false" />
30 <output name="output" file="poretools-times-out2.tabular" ftype="tabular" />
31 </test>
32 <test>
33 <expand macro="test_input" />
34 <param name="types" value="2D" />
35 <param name="detailed" value="true" />
36 <output name="output" file="poretools-times-out3.tabular" ftype="tabular" />
37 </test>
38 <test>
39 <expand macro="test_input" />
40 <param name="types" value="best" />
41 <param name="detailed" value="false" />
42 <output name="output" file="poretools-times-out4.tabular" ftype="tabular" />
43 </test>
44 <test>
45 <expand macro="test_input" />
46 <param name="types" value="all" />
47 <param name="detailed" value="true" />
48 <output name="output" file="poretools-times-out5.tabular" ftype="tabular" />
49 </test> 23 </test>
50 </tests> 24 </tests>
51 <help> 25 <help>
52 Collect read size statistics from a set of FAST5 files. 26 Collect read size statistics from a set of FAST5 files.
53 </help> 27 </help>