Mercurial > repos > iuc > presto_pairseq
diff presto_pairseq.xml @ 4:eed465eb14a3 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/presto commit 1beb51cefbe9e6edc8930c7ae0421f28e7bb93c8
| author | iuc |
|---|---|
| date | Fri, 04 Oct 2024 09:04:27 +0000 |
| parents | 49e7407445c3 |
| children |
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--- a/presto_pairseq.xml Sat Sep 25 18:34:52 2021 +0000 +++ b/presto_pairseq.xml Fri Oct 04 09:04:27 2024 +0000 @@ -1,9 +1,9 @@ <tool id="presto_pairseq" name="pRESTO PairSeq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>Sorts and matches sequence records with matching coordinates across files</description> - <expand macro="bio_tools"/> <macros> <import>presto_macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements"/> @@ -38,13 +38,13 @@ <param argument="--failed" type="boolean" checked="false" truevalue="--failed" falsevalue="" label="Failed reads fastq output" /> </inputs> <outputs> - <data name="r1_out" format="fastq" from_work_dir="tmp-1_pair-pass.fastq"/> - <data name="r2_out" format="fastq" from_work_dir="tmp-2_pair-pass.fastq"/> + <data name="r1_out" format="fastq" from_work_dir="tmp-1_pair-pass.fastq" label="${tool.name} on ${on_string}: Paired R1"/> + <data name="r2_out" format="fastq" from_work_dir="tmp-2_pair-pass.fastq" label="${tool.name} on ${on_string}: Paired R2"/> <!-- only give these 2 outputs if input failed_fastq=True--> - <data name="r1_fail_out" format="fastq" from_work_dir="tmp-1_pair-fail.fastq"> + <data name="r1_fail_out" format="fastq" from_work_dir="tmp-1_pair-fail.fastq" label="${tool.name} on ${on_string}: Unpaired R1"> <filter>failed</filter> </data> - <data name="r2_fail_out" format="fastq" from_work_dir="tmp-2_pair-fail.fastq"> + <data name="r2_fail_out" format="fastq" from_work_dir="tmp-2_pair-fail.fastq" label="${tool.name} on ${on_string}: Unpaired R2"> <filter>failed</filter> </data> </outputs>