Mercurial > repos > iuc > presto_pairseq

changeset 4:eed465eb14a3 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/presto commit 1beb51cefbe9e6edc8930c7ae0421f28e7bb93c8
author iuc
date Fri, 04 Oct 2024 09:04:27 +0000
parents 49e7407445c3
children
files presto_pairseq.xml
diffstat 1 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/presto_pairseq.xml	Sat Sep 25 18:34:52 2021 +0000
+++ b/presto_pairseq.xml	Fri Oct 04 09:04:27 2024 +0000
@@ -1,9 +1,9 @@
 <tool id="presto_pairseq" name="pRESTO PairSeq" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Sorts and matches sequence records with matching coordinates across files</description>
-    <expand macro="bio_tools"/>
     <macros>
         <import>presto_macros.xml</import>
 	</macros>
+    <expand macro="bio_tools"/>
 
 	<expand macro="requirements"/>
 
@@ -38,13 +38,13 @@
         <param argument="--failed" type="boolean" checked="false" truevalue="--failed" falsevalue="" label="Failed reads fastq output" />
     </inputs>
     <outputs>
-        <data name="r1_out" format="fastq" from_work_dir="tmp-1_pair-pass.fastq"/>
-        <data name="r2_out" format="fastq" from_work_dir="tmp-2_pair-pass.fastq"/>
+        <data name="r1_out" format="fastq" from_work_dir="tmp-1_pair-pass.fastq" label="${tool.name} on ${on_string}: Paired R1"/>
+        <data name="r2_out" format="fastq" from_work_dir="tmp-2_pair-pass.fastq" label="${tool.name} on ${on_string}: Paired R2"/>
         <!-- only give these 2 outputs if input failed_fastq=True-->
-        <data name="r1_fail_out" format="fastq" from_work_dir="tmp-1_pair-fail.fastq">
+        <data name="r1_fail_out" format="fastq" from_work_dir="tmp-1_pair-fail.fastq" label="${tool.name} on ${on_string}: Unpaired R1">
             <filter>failed</filter>
         </data>
-        <data name="r2_fail_out" format="fastq" from_work_dir="tmp-2_pair-fail.fastq">
+        <data name="r2_fail_out" format="fastq" from_work_dir="tmp-2_pair-fail.fastq" label="${tool.name} on ${on_string}: Unpaired R2">
             <filter>failed</filter>
         </data>
     </outputs>