Mercurial > repos > iuc > proteinortho_grab_proteins

comparison proteinortho_macros.xml @ 5:a87f7278b4ee draft

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planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 84c463c8317d7c16c2b86b1d8657932cc0f39791
author iuc
date Tue, 22 Nov 2022 16:51:10 +0000
parents d5e4450964f8
children e2a8e134e928
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4:d5e4450964f8 5:a87f7278b4ee
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">6.0.32</token> 3 <token name="@TOOL_VERSION@">6.1.2</token>
4 <token name="@WRAPPER_VERSION@">0</token> 4 <token name="@WRAPPER_VERSION@">1</token>
5 <token name="@PROFILE@">20.09</token> 5 <token name="@PROFILE@">20.09</token>
6 <xml name="citations"> 6 <xml name="citations">
7 <citations> 7 <citations>
8 <citation type="doi">10.1186/1471-2105-12-124</citation> 8 <citation type="doi">10.1186/1471-2105-12-124</citation>
9 <citation type="doi">10.1371/journal.pone.0105015</citation> 9 <citation type="doi">10.1371/journal.pone.0105015</citation>
12 <xml name="requirements"> 12 <xml name="requirements">
13 <requirements> 13 <requirements>
14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement> 14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement>
15 <!-- blast, blat, and last are not in the biopython requirements 15 <!-- blast, blat, and last are not in the biopython requirements
16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 --> 16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 -->
17 <requirement type="package" version="2.0.9">diamond</requirement> 17 <requirement type="package" version="2.0.15">diamond</requirement>
18 <requirement type="package" version="2.12.0">blast</requirement> 18 <requirement type="package" version="2.13.0">blast</requirement>
19 <requirement type="package" version="36">blat</requirement> 19 <requirement type="package" version="377">ucsc-blat</requirement>
20 <requirement type="package" version="1257">last</requirement> 20 <requirement type="package" version="1418">last</requirement>
21 </requirements> 21 </requirements>
22 </xml> 22 </xml>
23 <xml name="version_command"> 23 <xml name="version_command">
24 <version_command>proteinortho -v</version_command> 24 <version_command>proteinortho -v</version_command>
25 </xml> 25 </xml>