Mercurial > repos > iuc > purge_dups
changeset 4:a315c25dc813 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/purge_dups commit d2ef7bd6598695a681446eaf9c5b8c142e8a0199"
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,86 @@ +<macros> + <token name="@TOOL_VERSION@">1.2.5</token> + <token name="@VERSION_SUFFIX@">4</token> + <xml name="xrefs"> + <xrefs> + <xref type="bio.tools">purge_dups</xref> + </xrefs> + </xml> + <xml name="trimmers"> + <section name="section_hist" title="Histogram plot options" > + <!--<param name="cutoffs_his" type="data" optional="true" format="txt" label="Read depth cutoffs file" />--> + <param argument="--ymin" type="integer" optional="true" min="0" label="Specify a minimum for the Y axis"/> + <param argument="--ymax" type="integer" optional="true" label="Specify a maximum for the Y axis"/> + <param argument="--xmin" type="integer" optional="true" min="0" label="Specify a minimum for the X axis"/> + <param argument="--xmax" type="integer" optional="true" label="Specify a maximum for the X axis"/> + <param argument="--title" type="text" value="Read depth histogram plot" label="Histogram title"/> + </section> + </xml> + <token name="@HIST_PLOT@"><![CDATA[ + python '$__tool_directory__/hist_plot.py' + --cutoffs cutoffs.tsv + #if $function_select.section_hist.ymin + --ymin $function_select.section_hist.ymin + #end if + #if $function_select.section_hist.ymax + --ymax $function_select.section_hist.ymax + #end if + #if $function_select.section_hist.xmin + --xmin $function_select.section_hist.xmin + #end if + #if $function_select.section_hist.xmax + --xmax $function_select.section_hist.xmax + #end if + #if $function_select.section_hist.title + --title '${function_select.section_hist.title}' + #end if + depth.stat hist.png + ]]></token> + <token name="@CALCUTS@"><![CDATA[ + calcuts + #if $function_select.section_calcuts.min_depth: + -f $function_select.section_calcuts.min_depth + #end if + #if $function_select.section_calcuts.low_depth: + -l $function_select.section_calcuts.low_depth + #end if + #if $function_select.section_calcuts.transition: + -m $function_select.section_calcuts.transition + #end if + #if $function_select.section_calcuts.upper_depth: + -u $function_select.section_calcuts.upper_depth + #end if + $function_select.section_calcuts.ploidy + ]]></token> + <xml name="calcuts"> + <section name="section_calcuts" title="Calcuts options" expanded="true"> + <param argument="-f" name="min_depth" type="float" min="0" max="1" value="0.1" label="Minimum depth count fraction to maximum depth count"/> + <param argument="-l" name="low_depth" type="integer" min="0" optional="true" label="Lower bound for read depth" /> + <param argument="-m" name="transition" type="integer" min="0" optional="true" label="Transition between haploid and diploid"/> + <param argument="-u" name="upper_depth" type="integer" min="0" optional="true" label="Upper bound for read depth" /> + <param name="ploidy" argument="-d" type="select" label="Ploidy" help="Treat as haploid assembly or diploid assembly"> + <option value="-d 0" selected="true">Diploid</option> + <option value="-d 1">Haploid</option> + </param> + </section> + </xml> + <xml name="output_macro"> + <param name="output_options" type="select" multiple="true" display="checkboxes" label="Output files"> + <yield /> + <option value="histogram" selected="true">Histogram plot</option> + <option value="calcuts_cutoff" selected="true">Calcuts cutoff</option> + <option value="calcuts_log">Calcuts log</option> + </param> + </xml> + <xml name="requirements"> + <requirements> + <requirement type="package" version="@TOOL_VERSION@">purge_dups</requirement> + <requirement type="package" version="3.4.2">matplotlib-base</requirement> + </requirements> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.1093/bioinformatics/btaa025</citation> + </citations> + </xml> +</macros>
--- a/purge_dups.xml Mon Jun 14 18:01:05 2021 +0000 +++ b/purge_dups.xml Tue Oct 12 19:07:05 2021 +0000 @@ -1,71 +1,10 @@ <tool id="purge_dups" name="Purge overlaps" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> <description>and haplotigs in an assembly based on read depth (purge_dups)</description> <macros> - <token name="@TOOL_VERSION@">1.2.5</token> - <token name="@VERSION_SUFFIX@">3</token> - <xml name="trimmers"> - <section name="section_hist" title="Histogram plot options" > - <!--<param name="cutoffs_his" type="data" optional="true" format="txt" label="Read depth cutoffs file" />--> - <param argument="--ymin" type="integer" optional="true" min="0" label="Specify a minimum for the Y axis"/> - <param argument="--ymax" type="integer" optional="true" label="Specify a maximum for the Y axis"/> - <param argument="--xmin" type="integer" optional="true" min="0" label="Specify a minimum for the X axis"/> - <param argument="--xmax" type="integer" optional="true" label="Specify a maximum for the X axis"/> - <param argument="--title" type="text" value="Read depth histogram plot" label="Histogram title"/> - </section> - </xml> - <token name="@HIST_PLOT@"><![CDATA[ - python '$__tool_directory__/hist_plot.py' - --cutoffs cutoffs.tsv - #if $function_select.section_hist.ymin - --ymin $function_select.section_hist.ymin - #end if - #if $function_select.section_hist.ymax - --ymax $function_select.section_hist.ymax - #end if - #if $function_select.section_hist.xmin - --xmin $function_select.section_hist.xmin - #end if - #if $function_select.section_hist.xmax - --xmax $function_select.section_hist.xmax - #end if - #if $function_select.section_hist.title - --title '${function_select.section_hist.title}' - #end if - depth.stat hist.png - ]]></token> - <token name="@CALCUTS@"><![CDATA[ - calcuts - #if $function_select.section_calcuts.min_depth: - -f $function_select.section_calcuts.min_depth - #end if - #if $function_select.section_calcuts.low_depth: - -l $function_select.section_calcuts.low_depth - #end if - #if $function_select.section_calcuts.transition: - -m $function_select.section_calcuts.transition - #end if - #if $function_select.section_calcuts.upper_depth: - -u $function_select.section_calcuts.upper_depth - #end if - $function_select.section_calcuts.ploidy - ]]></token> - <xml name="calcuts"> - <section name="section_calcuts" title="Calcuts options"> - <param name="min_depth" type="float" label="Minimum depth count fraction to maximum depth coun" min="0" max="1" argument="-f" optional="true" help="Default = 0.1"/> - <param name="low_depth" label="Lower bound for read depth" type="integer" argument="-l" optional="true"/> - <param name="transition" label="Transition between haploid and diploid" type="integer" argument="-m" optional="true"/> - <param name="upper_depth" label="Upper bound for read depth" type="integer" argument="-u" optional="true"/> - <param name="ploidy" argument="-d" type="select" label="Ploidy"> - <option value="-d 0" selected="true">Diploid [0]</option> - <option value="-d 1">Haploid [1]</option> - </param> - </section> - </xml> + <import>macros.xml</import> </macros> - <requirements> - <requirement type="package" version="@TOOL_VERSION@">purge_dups</requirement> - <requirement type="package" version="3.4.2">matplotlib-base</requirement> - </requirements> + <expand macro="xrefs"/> + <expand macro="requirements"/> <command detect_errors="exit_code"><![CDATA[ #if $function_select.functions == 'purge_dups': #for $i, $file in enumerate($function_select.input): @@ -82,42 +21,23 @@ #if $function_select.cutoffs: -T '${function_select.cutoffs}' #end if - #if $function_select.min_bad: - -f $function_select.min_bad - #end if - #if $function_select.min_align: - -a $function_select.min_align - #end if - #if $function_select.min_match: - -b $function_select.min_match - #end if - #if $function_select.min_chain: - -m $function_select.min_chain - #end if - #if $function_select.max_gap: - -M $function_select.max_gap - #end if + -f $function_select.min_bad + -a $function_select.min_align + -b $function_select.min_match + -m $function_select.min_chain + -M $function_select.max_gap #if $function_select.double_chain.chaining_rounds == 'two': -2 - #if $function_select.double_chain.max_gap_2: - -G $function_select.double_chain.max_gap_2 - #end if + -G $function_select.double_chain.max_gap_2 #end if - #if $function_select.min_chain_score: - -l $function_select.min_chain_score - #end if - #if $function_select.max_extend: - -E $function_select.max_extend - #end if + -l $function_select.min_chain_score + -E $function_select.max_extend #for $i, $file in enumerate($function_select.input): '${i}.gz' #end for > dups.bed 2> purge_dups.log #else if $function_select.functions == 'split_fa': split_fa - #if $function_select.split: - -n $function_select.split - #end if '${function_select.input}' > split.fasta #else if $function_select.functions == 'pbcstat': #for $i, $file in enumerate($function_select.input): @@ -128,20 +48,13 @@ #end if #end for pbcstat - #if $function_select.max_cov: - -M $function_select.max_cov - #end if - #if $function_select.min_map_ratio: - -f $function_select.min_map_ratio + -M $function_select.pbcstat_options.max_cov + -f $function_select.pbcstat_options.min_map_ratio + #if $function_select.pbcstat_options.min_map_qual: + -q $function_select.pbcstat_options.min_map_qual #end if - #if $function_select.min_map_qual: - -q $function_select.min_map_qual - #end if - #if $function_select.flank: - -l $function_select.flank - #end if - $function_select.primary_alignments - + -l $function_select.pbcstat_options.flank + $function_select.pbcstat_options.primary_alignments #for $i, $file in enumerate($function_select.input): '${i}.gz' #end for @@ -151,15 +64,11 @@ #else if $function_select.functions == 'ngscstat': ngscstat - #if $function_select.min_align_qual: - -q $function_select.min_align_qual - #end if + -q $function_select.ngscstat_options.min_align_qual ## #if $function_select.max_depth: ## -M $function_select.max_depth ## #end if - #if $function_select.max_insert: - -L $function_select.max_insert - #end if + -L $function_select.ngscstat_options.max_insert '${function_select.input}' && mv TX.stat depth.stat && @CALCUTS@ depth.stat > cutoffs.tsv 2>calcuts.log @@ -170,148 +79,203 @@ #else if $function_select.functions == 'get_seqs': get_seqs - $function_select.coverage - $function_select.haplotigs - $function_select.end_trim - $function_select.split - #if $function_select.length: - -l $function_select.length - #end if - #if $function_select.min_ratio: - -m $function_select.min_ratio - #end if - #if $function_select.min_gap: - -g $function_select.min_gap - #end if + $function_select.advanced_options.coverage + $function_select.advanced_options.haplotigs + $function_select.advanced_options.end_trim + $function_select.advanced_options.split + -l $function_select.advanced_options.length + -m $function_select.advanced_options.min_ratio + -g $function_select.advanced_options.min_gap '${function_select.bed_input}' '${function_select.fasta_input}' #end if ]]></command> <inputs> <conditional name="function_select"> - <param type="select" name="functions" label="Select the purge_dups function"> + <param type="select" name="functions" label="Function mode"> + <option value="pbcstat">Calculate coverage cutoff, base-level read depth and create read depth histogram for PacBio data (calcuts+pbcstat)</option> + <option value="ngscstat">Calculate coverage cutoff, base-level read depth and create read depth histogram for Illumina data (calcuts+ngscstat)</option> + <option value="calcuts">Calculate coverage cutoffs (calcuts)</option> + <option value="split_fa">Split assembly FASTA files by 'N's (split_fa)</option> <option value="purge_dups">Purge haplotigs and overlaps for an assembly (purge_dups)</option> - <option value="split_fa">Split FASTA file by 'N's (split_fa)</option> - <option value="pbcstat">Calculate coverage cutoff and create read depth histogram and base-levelread depth for PacBio data (calcuts+pbcstats)</option> - <option value="ngscstat">Calculate coverage cutoff and create read depth histogram and base-level read detph for Illumina data (calcuts+ngscstat)</option> - <option value="calcuts">calculate coverage cutoffs (calcuts)</option> - <option value="get_seqs">Obtain seqeuences after purging (get_seqs)</option> + <option value="get_seqs">Obtain sequences after purging (get_seqs)</option> </param> <when value="purge_dups"> <param name="input" type="data" format="paf,paf.gz" multiple="true" label="PAF input file"/> - <param name="coverage" type="data" format="tabular" optional="true" argument="-c" label="Base-level coverage file" /> - <param name="cutoffs" type="data" format="tabular" label ="Cutoffs file" optional="true" argument="-T"/> - <param name="min_bad" type="float" min="0" max="1" argument="-f" optional="true" label="Minimum fraction of haploid/diploid/bad/repetitive bases in a sequence" help="Default = 0.8"/> - <param name="min_align" type="integer" label="Minimum alignment score" argument="-a" optional="true"/> - <param name="min_match" type="integer" label="Minimum max match score" argument="-b" optional="true"/> - <param name="min_chain" label="Minimum matching bases for chaining" type="integer" argument="-m" optional="true"/> - <param name="max_gap" label="Maximum gap size for chaining" type="integer" argument="-M" optional="true"/> + <param argument="-c" name="coverage" type="data" + format="tabular" optional="true" label="Base-level coverage file" + help="This file is generated with purge_dups by using the 'Calculate coverage cutoff, base-level + read depth and create read depth histogram' option"/> + <param argument="-T" name="cutoffs" type="data" + format="tabular" optional="true" label ="Cutoffs file" + help="This file is generated with purge_dups by using the 'Calculate coverage cutoff, base-level + read depth and create read depth histogram' option"/> + <param argument="-f" name="min_bad" type="float" + min="0" max="1" value="0.8" label="Minimum fraction of haploid/diploid/bad/repetitive bases in a sequence" + help="This parameter is set for a suspect haplotigs. If 80% (default value) of a scaffold is high coverage + (defined by the sixth column of the cutoff file), it's a repetitive contig. If 80% is low coverage (defined + in the first column of the cutoff file), it's a junk contig. If 80% is above diploid coverage(defined in + the fourth column of the cutoff file), it's a diploid, otherwise it's a suspect haplotig"/> + <param argument="-a" name="min_align" type="integer" + min="0" value="70" label="Minimum alignment score" + help="If its alignment score is larger than this parameter and max match score larger than + the 'mininum max match score' (-b), it is marked as a repeat; if the alignment score is larger than this parameter + and max match score no larger than the 'mininum max match score', it is marked as a haplotig. + Otherwise it is left as a candidate primary contig. If after purging, the complete genes reported by BUSCO are + too low, you can try to increase this parameter"/> + <param argument="-b" name="min_match" type="integer" + min="0" value="200" label="Minimum max match score" + help="If its alignment score is larger than the 'minimum align score' (-a) and max match score larger than + this parameter, it is marked as a repeat; if the alignment score is larger than the 'minimum + align' and max match score no larger than this parameter, it is marked as a haplotig. + Otherwise it is left as a candidate primary contig."/> + <param argument="-m" name="min_chain" type="integer" + min="0" value="500" label="Minimum matching bases for chaining" + help="In the first round, it will asset chains consistent alignments within this parameter value"/> + <param argument="-M" name="max_gap" type="integer" + min="0" value="20000" label="Maximum gap size for chaining" + help="In the first round, it will asset chains consistent alignments within this parameter value"/> <conditional name="double_chain"> <param type="select" name="chaining_rounds" label="Rounds of chaining"> <option value="one">1 round</option> <option value="two">2 rounds</option> </param> <when value="two"> - <param name="max_gap_2" argument="-G" optional="true" label="Maximum gap size for second round of chaining" type="integer"/> + <param argument="-G" name="max_gap_2" type="integer" + min="0" value="50000" label="Maximum gap size for second round of chaining" + help="In the second round, it will asset chains consistent alignments within this parameter value"/> </when> <when value="one"/> </conditional> - <param name="min_chain_score" argument="-l" optional="true" label="Minimum chaining score for a match" type="integer" /> - <param name="max_extend" argument="-E" optional="true" label="Maximum extension for contig ends" type="integer" /> + <param argument="-l" name="min_chain_score" type="integer" + min="0" value="10000" label="Minimum chaining score for a match" + help="This parameter control the overlap size. You should decrease its value to allow more overlaps"/> + <param argument="-E" name="max_extend" type="integer" + min="0" value="15000" label="Maximum extension for contig ends" + help="If the chained alignment is within this value to the contig ends, it will extended to the ends"/> + <param name="log_file" type="boolean" truevalue="true" falsevalue="false" label="Generate log file"/> </when> <when value="split_fa"> - <param name="input" type="data" format="fasta" label="Base-level coverage file"/> - <param name="split" type="boolean" truevalue="-n" falsevalue="" checked="false" label="Base-level coverage file" /> + <param name="input" type="data" format="fasta,fasta.gz" label="Assembly FASTA file" help="The sequence will be cleaved in those position in which the nucleotides is an 'N' or an 'n'."/> + <!-- This option disables the cleaving process, and yield the original sequence + <param argument="-n" type="boolean" truevalue="-n" falsevalue="" checked="false" label="Block split by N" help="Enable this option if you do not want break your scaffols into contigs."/> + --> </when> <when value="pbcstat"> <param name="input" type="data" format="paf,paf.gz" multiple="true" label="PAF input file"/> - <param name="max_cov" type="integer" label="Maximum coverage" argument="-M" optional="true"/> - <param name="min_map_ratio" argument="-f" type="float" min="0" max="1" value="0" label="Minimum mapping length ratio"/> - <param name="min_map_qual" type="integer" argument="-q" optional="true" label="Minimum mapping quality"/> - <param name="flank" type="integer" argument="-l" optional="true" label="Flanking space" /> - <param name="primary_alignments" argument="-p" type="boolean" truevalue="-p" falsevalue="" checked="true" label="Use only primary alignments" /> + <section name="pbcstat_options" title="PBCSTAT options" expanded="true"> + <param argument="-M" name="max_cov" type="integer" min="0" value="500" label="Maximum coverage"/> + <param argument="-f" name="min_map_ratio" type="float" min="0" max="1" value="0" label="Minimum mapping length ratio"/> + <param argument="-q" name="min_map_qual" type="integer" optional="true" label="Minimum mapping quality"/> + <param argument="-l" name="flank" type="integer" min="0" value="0" label="Flanking space" /> + <param argument="-p" name="primary_alignments" type="boolean" truevalue="-p" falsevalue="" checked="true" label="Use only primary alignments" /> + </section> <expand macro="calcuts" /> <expand macro="trimmers"/> + <expand macro="output_macro"> + <option value="pbcstat_coverage" selected="true">PBCSTAT base coverage</option> + <option value="pbcstat_wig">PBCSTAT base coverage (WIG)</option> + <option value="depth_stats">PBCSTAT depths</option> + </expand> </when> <when value="ngscstat"> <param name="input" type="data" format="bam" label="BAM input file"/> - <param name="min_align_qual" type="integer" argument="-q" optional="true" label="Minimum alignment quality" /> - <!-- Param exists in help text, but isn't actually part of the code. Maybe in the next release? --> - <!-- <param name="max_depth" type="integer" label="Maximum read depth" argument="-M" optional="true"/> --> - <param name="max_insert" type="integer" argument="-L" optional="true" label="Maximum insert size"/> + <section name="ngscstat_options" title="NGSCSTAT options" expanded="true"> + <param argument="-q" name="min_align_qual" type="integer" min="0" value="30" label="Minimum alignment quality" /> + <!-- Param exists in help text, but isn't actually part of the code. Maybe in the next release? --> + <!-- <param name="max_depth" type="integer" label="Maximum read depth" argument="-M" optional="true"/> --> + <param argument="-L" name="max_insert" type="integer" min="0" value="1000" label="Maximum insert size"/> + </section> <expand macro="calcuts" /> <expand macro="trimmers"/> + <expand macro="output_macro"> + <option value="ngscstat_coverage" selected="true">NGSCSTAT base coverage</option> + </expand> </when> - + <when value="calcuts"> - <param name="input" type="data" format="tabular" label="STAT input file"/> + <param name="input" type="data" format="tabular" label="Depths input file"/> <expand macro="calcuts" /> </when> - <when value="get_seqs"> - <param name="fasta_input" type="data" format="fasta" label="Fasta input file"/> - <param name="bed_input" type="data" format="bed" label="Bed input file"/> - <param name="coverage" type="boolean" argument="-c" truevalue="-c" falsevalue="" checked="false" label="Keep high coverage contigs in the primary contig set"/> - <param name="haplotigs" type="boolean" argument="-a" truevalue="-a" falsevalue="" checked="false" label="Do not add prefix to haplotigs"/> - <param name="length" type="integer" argument="-l" optional="true" label="Minimum primary contig length" help="Default: 1000"/> - <param name="min_ratio" type="float" min="0" max="1" argument="-m" optional="true" label="Minimum ratio of remaining primary contig length to the original contig length"/> - <param name="end_trim" type="boolean" argument="-e" truevalue="-e" falsevalue="" checked="true" label="Trim end sequences" help="Only remove sequences at end of halplotigs If you also want to remove the duplications in the middle, set to false, however that may delete false positive duplications."/> - <param name="split" type="boolean" argument="-s" truevalue="-s" falsevalue="" checked="false" label="Split contigs"/> - <param name="min_gap" type="integer" argument="-g" optional="true" help="default=10k" label="Minimum gap size between duplications" /> + <param name="fasta_input" type="data" format="fasta" label="Assembly FASTA file"/> + <param name="bed_input" type="data" format="bed" label="BED input file" help="Generated by the 'purge_dups' function mode."/> + <section name="advanced_options" title="Advanced options"> + <param argument="-c" name="coverage" type="boolean" + truevalue="-c" falsevalue="" checked="false" label="Keep high coverage contigs in the primary contig set"/> + <param argument="-a" name="haplotigs" type="boolean" truevalue="-a" falsevalue="" checked="false" label="Do not add prefix to haplotigs"/> + <param argument="-l" name="length" type="integer" min="0" value="10000" label="Minimum primary contig length" /> + <param argument="-m" name="min_ratio" type="float" + min="0" max="1" value="0.05" label="Minimum ratio of remaining primary contig length to the original contig length"/> + <param argument="-e" name="end_trim" type="boolean" + truevalue="-e" falsevalue="" checked="true" label="Trim end sequences" + help="Only remove sequences at end of halplotigs. If you also want to remove the duplications in the middle, + set to false, however that may delete false positive duplications."/> + <param argument="-s" name="split" type="boolean" truevalue="-s" falsevalue="" checked="false" label="Split contigs"/> + <param argument="-g" name="min_gap" type="integer" min="0" value="10000" label="Minimum gap size between duplications" /> + </section> </when> </conditional> </inputs> <outputs> <!-- Get Seqs --> - <data name="get_seqs_hap" format="fasta" from_work_dir="hap.fa" label="${tool.name} on ${on_string}: get seqs haplotype fasta" > + <data name="get_seqs_hap" format="fasta" from_work_dir="hap.fa" label="${tool.name} on ${on_string}: get_seqs haplotype" > <filter>function_select['functions'] == 'get_seqs'</filter> </data> - <data name="get_seqs_purged" format="fasta" from_work_dir="purged.fa" label="${tool.name} on ${on_string}: get seqs purged fasta"> + <data name="get_seqs_purged" format="fasta" from_work_dir="purged.fa" label="${tool.name} on ${on_string}: get_seqs purged sequences"> <filter>function_select['functions'] == 'get_seqs'</filter> </data> <!-- Split FA --> - <data name="split_fasta" format="fasta" from_work_dir="split.fasta" label="${tool.name} on ${on_string}: split fasta"> + <data name="split_fasta" format="fasta" from_work_dir="split.fasta" label="${tool.name} on ${on_string}: split FASTA"> <filter>function_select['functions'] == 'split_fa'</filter> </data> <!-- Ngscstat --> - <data name="ngscstat_cov" format="tabular" from_work_dir="TX.base.cov" label="${tool.name} on ${on_string}: ngscstat base coverage file"> - <filter>function_select['functions'] == 'ngscstat'</filter> + <data name="ngscstat_cov" format="tabular" from_work_dir="TX.base.cov" label="${tool.name} on ${on_string}: NGSCSTAT base coverage"> + <filter>function_select['functions'] == 'ngscstat'</filter> + <filter>'ngscstat_coverage' in function_select['output_options']</filter> </data> - <data name="stat_file" format="tabular" from_work_dir="depth.stat" label="${tool.name} on ${on_string}: stat file"> + <data name="stat_file" format="tabular" from_work_dir="depth.stat" label="${tool.name} on ${on_string}: depths"> <filter>function_select['functions'] == 'ngscstat' or function_select['functions'] == 'pbcstat'</filter> + <filter>'depth_stats' in function_select['output_options']</filter> </data> <!-- Pbcstat --> - <data name="pbcstat_cov" format="tabular" from_work_dir="PB.base.cov" label="${tool.name} on ${on_string}: pbcstat base coverage file"> + <data name="pbcstat_cov" format="tabular" from_work_dir="PB.base.cov" label="${tool.name} on ${on_string}: PBCSTAT base coverage"> <filter>function_select['functions'] == 'pbcstat'</filter> + <filter>'pbcstat_coverage' in function_select['output_options']</filter> </data> - <data name="pbcstat_wig" format="wig" from_work_dir="PB.cov.wig" label="${tool.name} on ${on_string}: pbcstat base wig file"> + <data name="pbcstat_wig" format="wig" from_work_dir="PB.cov.wig" label="${tool.name} on ${on_string}: PBCSTAT base coverage (WIG)"> <filter>function_select['functions'] == 'pbcstat'</filter> + <filter>'pbcstat_wig' in function_select['output_options']</filter> </data> <data name="hist" format="png" from_work_dir="hist.png" label="${tool.name} on ${on_string}: histogram plot"> <filter>function_select['functions'] == 'pbcstat' or function_select['functions'] == 'ngscstat'</filter> + <filter>'histogram' in function_select['output_options']</filter> </data> <!-- Calcuts --> - <data name="calcuts_log" format="txt" from_work_dir="calcuts.log" label="${tool.name} on ${on_string}: calcuts log file"> + <data name="calcuts_log" format="txt" from_work_dir="calcuts.log" label="${tool.name} on ${on_string}: calcuts log"> <filter>function_select['functions'] in ('pbcstat', 'ngscstat', 'calcuts')</filter> + <filter>'calcuts_log' in function_select['output_options']</filter> </data> - <data name="calcuts_tab" format="tabular" from_work_dir="cutoffs.tsv" label="${tool.name} on ${on_string}: calcuts cutoff file"> + <data name="calcuts_cutoff" format="tabular" from_work_dir="cutoffs.tsv" label="${tool.name} on ${on_string}: calcuts cutoff"> <filter>function_select['functions'] in ('pbcstat', 'ngscstat', 'calcuts')</filter> + <filter>'calcuts_cutoff' in function_select['output_options']</filter> </data> <!-- Purge dups --> - <data name="purge_dups_log" format="txt" from_work_dir="purge_dups.log" label="${tool.name} on ${on_string}: purge_dups log file"> + <data name="purge_dups_log" format="txt" from_work_dir="purge_dups.log" label="${tool.name} on ${on_string}: purge_dups log"> <filter>function_select['functions'] == 'purge_dups'</filter> + <filter>function_select['log_file']</filter> </data> - <data name="purge_dups_bed" format="bed" from_work_dir="dups.bed" label="${tool.name} on ${on_string}: purge_dups bed file"> + <data name="purge_dups_bed" format="bed" from_work_dir="dups.bed" label="${tool.name} on ${on_string}: purge_dups BED"> <filter>function_select['functions'] == 'purge_dups'</filter> </data> </outputs> <tests> - <!-- Purge dups --> - <test expect_num_outputs="2"> + <!-- Test 1 Purge dups --> + <test expect_num_outputs="1"> <conditional name="function_select"> <param name="functions" value="purge_dups"/> - <param name="input" value="test.paf"/> + <param name="input" value="assembly_test.paf"/> <param name="coverage" value="test.cov" ftype="tabular"/> <param name="cutoffs" value="cutoffs.tsv" ftype="tabular"/> <param name="min_bad" value="0.01"/> @@ -326,13 +290,13 @@ <param name="min_chain_score" value="1"/> <param name="max_extend" value="100"/> </conditional> - <output name="purge_dups_bed" value="purge_dups_out.bed"/> + <output name="purge_dups_bed" value="purge_dups_01.bed" ftype="bed"/> </test> - <!-- Purge dups gzip --> + <!-- Test 2 Purge dups gzip --> <test expect_num_outputs="2"> <conditional name="function_select"> <param name="functions" value="purge_dups"/> - <param name="input" value="test.paf.gz" ftype="paf.gz"/> + <param name="input" value="assembly_test.paf.gz" ftype="paf.gz"/> <param name="coverage" value="test.cov" ftype="tabular"/> <param name="cutoffs" value="cutoffs.tsv" ftype="tabular"/> <param name="min_bad" value="0.01"/> @@ -346,36 +310,68 @@ </conditional> <param name="min_chain_score" value="1"/> <param name="max_extend" value="100"/> + <param name="log_file" value="true"/> </conditional> - <output name="purge_dups_bed" value="purge_dups_out.bed"/> + <output name="purge_dups_bed" value="purge_dups_02.bed" ftype="bed"/> + <output name="purge_dups_log" value="purge_dups_log_02.txt" ftype="txt"/> + </test> - <!-- Purge dups multiple input --> - <test expect_num_outputs="2"> + <!-- Test 3 Purge dups multiple input --> + <test expect_num_outputs="1"> <conditional name="function_select"> <param name="functions" value="purge_dups"/> - <param name="input" value="test.paf,test2.paf.gz"/> + <param name="input" value="assembly_test.paf,test2.paf.gz"/> </conditional> - <output name="purge_dups_bed" value="purge_dups_out_2.bed"/> + <output name="purge_dups_bed" value="purge_dups_03.bed" ftype="bed"/> </test> - <!-- Split fa --> + <!-- Test 4 Split fa --> <test expect_num_outputs="1"> <conditional name="function_select"> <param name="functions" value="split_fa"/> - <param name="input" value="test.fasta"/> - <param name="split" value="-n"/> + <param name="input" value="assembly_test.fasta"/> </conditional> - <output name="split_fasta" value="split_out.fasta"/> + <output name="split_fasta" value="split_04.fasta" ftype="fasta"/> </test> - <!-- pbcstat --> + <!-- Test 5 pbcstat --> <test expect_num_outputs="6"> <conditional name="function_select"> <param name="functions" value="pbcstat"/> - <param name="input" value="test.paf"/> - <param name="max_cov" value="1000"/> - <param name="min_map_ratio" value="0.01"/> - <param name="min_map_qual" value="1"/> - <param name="flank" value="1"/> - <param name="primary_alignments" value="-p"/> + <param name="input" value="assembly_test.paf"/> + <section name="pbcstat_options"> + <param name="max_cov" value="1000"/> + <param name="min_map_ratio" value="0.01"/> + <param name="min_map_qual" value="1"/> + <param name="flank" value="1"/> + <param name="primary_alignments" value="-p"/> + </section> + <section name="section_calcuts"> + <param name="min_depth" value="0.01"/> + <param name="low_depth" value="1"/> + <param name="transition" value="1"/> + <param name="upper_depth" value="100"/> + <param name="ploidy" value="-d 0"/> + </section> + <param name="output_options" value="pbcstat_coverage,pbcstat_wig,depth_stats,histogram,calcuts_cutoff,calcuts_log"/> + </conditional> + <output name="calcuts_cutoff" value="calcuts_cutoff_05.tabular" ftype="tabular"/> + <output name="calcuts_log" value="calcuts_log_05.txt" ftype="txt"/> + <output name="pbcstat_cov" value="pbcstat_cov_05.tabular" ftype="tabular"/> + <output name="pbcstat_wig" value="pbcstat_cov_05.wig" ftype="wig"/> + <output name="stat_file" value="pbcstats_05.tabular" ftype="tabular"/> + <output name="hist" value="hist_05.png" ftype="png" compare="sim_size"/> + </test> + <!-- Test 6 pbcstat gzip --> + <test expect_num_outputs="2"> + <conditional name="function_select"> + <param name="functions" value="pbcstat"/> + <param name="input" value="assembly_test.paf.gz" ftype="paf.gz"/> + <section name="pbcstat_options"> + <param name="max_cov" value="1000"/> + <param name="min_map_ratio" value="0.01"/> + <param name="min_map_qual" value="1"/> + <param name="flank" value="1"/> + <param name="primary_alignments" value="-p"/> + </section> <section name="section_calcuts"> <param name="min_depth" value="0.01"/> <param name="low_depth" value="1"/> @@ -384,22 +380,15 @@ <param name="ploidy" value="-d 0"/> </section> </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> - <output name="pbcstat_cov" value="out.cov"/> - <output name="pbcstat_wig" value="out.wig"/> - <output name="stat_file" value="pbcstats.tabular"/> - <output name="hist" value="hist.png" ftype="png" compare="sim_size"/> + <param name="output_options" value="pbcstat_coverage,calcuts_cutoff"/> + <output name="calcuts_cutoff" value="calcuts_cutoff_06.tabular" ftype="tabular"/> + <output name="pbcstat_cov" value="pbcstat_cov_06.tabular" ftype="tabular"/> </test> - <!-- pbcstat gzip --> - <test expect_num_outputs="6"> + <!-- Test 7 Pbcstat multiple input --> + <test expect_num_outputs="2"> <conditional name="function_select"> <param name="functions" value="pbcstat"/> - <param name="input" value="test.paf.gz" ftype="paf.gz"/> - <param name="max_cov" value="1000"/> - <param name="min_map_ratio" value="0.01"/> - <param name="min_map_qual" value="1"/> - <param name="flank" value="1"/> - <param name="primary_alignments" value="-p"/> + <param name="input" value="assembly_test.paf,test2.paf.gz"/> <section name="section_calcuts"> <param name="min_depth" value="0.01"/> <param name="low_depth" value="1"/> @@ -408,15 +397,19 @@ <param name="ploidy" value="-d 0"/> </section> </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> - <output name="pbcstat_cov" value="out.cov"/> - <output name="pbcstat_wig" value="out.wig"/> + <param name="output_options" value="pbcstat_coverage,calcuts_cutoff"/> + <output name="calcuts_cutoff" value="calcuts_cutoff_07.tabular" ftype="tabular"/> + <output name="pbcstat_cov" value="pbcstat_cov_07.tabular" ftype="tabular"/> </test> - <!-- Pbcstat multiple input --> - <test expect_num_outputs="6"> + <!-- Test 8 ngscstat --> + <test expect_num_outputs="2"> <conditional name="function_select"> - <param name="functions" value="pbcstat"/> - <param name="input" value="test.paf,test2.paf.gz"/> + <param name="functions" value="ngscstat"/> + <param name="input" value="test.bam"/> + <section name="ngscstat_options"> + <param name="min_align_qual" value="10"/> + <param name="max_insert" value="100"/> + </section> <section name="section_calcuts"> <param name="min_depth" value="0.01"/> <param name="low_depth" value="1"/> @@ -425,32 +418,11 @@ <param name="ploidy" value="-d 0"/> </section> </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> - <output name="pbcstat_cov" value="out2.cov"/> - <output name="stat_file" value="pbcstats2.tabular"/> - <output name="pbcstat_wig" value="out2.wig"/> + <param name="output_options" value="ngscstat_coverage,calcuts_cutoff"/> + <output name="calcuts_cutoff" value="calcuts_cutoff_08.tabular" ftype="tabular"/> + <output name="ngscstat_cov" value="ngsc_cov_08.tabular" ftype="tabular"/> </test> - <!-- ngscstat --> - <test expect_num_outputs="5"> - <conditional name="function_select"> - <param name="functions" value="ngscstat"/> - <param name="input" value="test.bam"/> - <param name="min_align_qual" value="10"/> - <param name="max_insert" value="100"/> - <section name="section_calcuts"> - <param name="min_depth" value="0.01"/> - <param name="low_depth" value="1"/> - <param name="transition" value="1"/> - <param name="upper_depth" value="100"/> - <param name="ploidy" value="-d 0"/> - </section> - </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> - <output name="ngscstat_cov" value="ngsc_out.cov"/> - <output name="stat_file" value="tx_stats.tabular"/> - <output name="hist" value="hist.png" ftype="png" compare="sim_size"/> - </test> - <!-- Calcuts --> + <!-- Test 9 Calcuts --> <test expect_num_outputs="2"> <conditional name="function_select"> <param name="functions" value="calcuts"/> @@ -463,34 +435,40 @@ <param name="ploidy" value="-d 0"/> </section> </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> + <output name="calcuts_cutoff" value="calcuts_cutoff_09.tabular" ftype="tabular"/> + <output name="calcuts_log" value="calcuts_log_09.txt" ftype="txt"/> </test> - <!-- Get seqs --> + <!-- Test 10 Get seqs --> <test expect_num_outputs="2"> <conditional name="function_select"> <param name="functions" value="get_seqs"/> <param name="fasta_input" value="split_out.fasta"/> <param name="bed_input" value="dups.bed"/> - <param name="coverage" value="-c"/> - <param name="length" value="10"/> - <param name="haplotigs" value="-a"/> - <param name="min_ratio" value=".01"/> - <param name="end_trim" value="-e"/> - <param name="split" value="-s"/> - <param name="min_gap" value="100000"/> + <section name="advanced_options"> + <param name="coverage" value="-c"/> + <param name="length" value="10"/> + <param name="haplotigs" value="-a"/> + <param name="min_ratio" value=".01"/> + <param name="end_trim" value="-e"/> + <param name="split" value="-s"/> + <param name="min_gap" value="100000"/> + </section> </conditional> - <output name="get_seqs_purged" value="purged_out.fa"/> + <output name="get_seqs_purged" value="get_seqs_purged_10.fa" ftype="fasta"/> + <output name="get_seqs_hap" value="get_seqs_hap_10.fa" ftype="fasta"/> </test> - <!-- pbcstat histogram options--> - <test expect_num_outputs="6"> + <!-- Test 11 pbcstat histogram options--> + <test expect_num_outputs="1"> <conditional name="function_select"> <param name="functions" value="pbcstat"/> - <param name="input" value="test.paf"/> - <param name="max_cov" value="1000"/> - <param name="min_map_ratio" value="0.01"/> - <param name="min_map_qual" value="1"/> - <param name="flank" value="1"/> - <param name="primary_alignments" value="-p"/> + <param name="input" value="assembly_test.paf"/> + <section name="pbcstat_options"> + <param name="max_cov" value="1000"/> + <param name="min_map_ratio" value="0.01"/> + <param name="min_map_qual" value="1"/> + <param name="flank" value="1"/> + <param name="primary_alignments" value="-p"/> + </section> <section name="section_calcuts"> <param name="min_depth" value="0.01"/> <param name="low_depth" value="1"/> @@ -504,22 +482,56 @@ <param name="cutoffs_his" value="calcuts_out.tsv"/> </section> </conditional> - <output name="calcuts_tab" value="calcuts_out.tsv"/> - <output name="pbcstat_cov" value="out_hist_options.cov"/> - <output name="pbcstat_wig" value="out_hist_options.wig"/> - <output name="stat_file" value="pbcstats_hist_options.tabular"/> - <output name="hist" value="hist_options.png" ftype="png" compare="sim_size"/> + <param name="output_options" value="histogram"/> + <output name="hist" value="hist_11.png" ftype="png" compare="sim_size"/> </test> </tests> <help><![CDATA[ - .. class:: infomark - - **What it does** +.. class:: infomark + +**Purpose** + +The purge_dups tools are designed to remove haplotigs and contig overlaps in a de novo assembly based on read depth. +purge_dups can significantly improve genome assemblies by removing overlaps and haplotigs caused by sequence divergence +in heterozygous regions. This both removes false duplications in primary draft assemblies while retaining completeness and sequence +integrity, and can improve scaffolding. + +---- + +.. class:: infomark + +**Pipeline Guide** + +Given a primary assembly, and an alternative assembly (optional, if you have one), follow the steps shown below to build your +own purge_dups pipeline, steps with same number can be run simultaneously. Among all the steps, although step 5 is optional, +we highly recommend our users to do so, because assemblers may produce overrepresented sequences. In such a case, the final +step 5 can be applied to remove those seqeuences. - The purge_dups tools are designed to remove haplotigs and contig overlaps in a de novo assembly based on read depth. + - Step 1: Calculate the coverage cutoffs and base coverages. + - Step 2: Split an assembly with the **split_fasfa** function and do a self-self alignment by using minimap2. + - Step 3: Purge haplotigs and overlaps with the **purge_dups** function. + - Step 4: Get purged primary and haplotig sequences from the draft assembly with the **get_seqs** function. + - Step 5: Merge hap.fa file, generated in the previous step, and the alternate assembly, and redo the above steps to get a decent haplotig set. + +---- + +.. class:: infomark + +**Limitations** + +- Read depth cutoffs calculation: the coverage cutoffs can be larger for a low heterozygosity species, which causes the purged assembly size smaller than expected. In such a case, please use script/hist_plot.py to make the histogram plot and set coverage cutoffs manually. +- Repeats: purge_dups has a limited ability to process repeats. + +---- + +.. class:: infomark + +**Purged assembly validation** + +There are many ways to validate the purged assembly. One way is to make a coverage plot for it, the 2nd way is to run `BUSCO <https://busco.ezlab.org/>`_. A thid option is to use `Merqury <https://github.com/marbl/merqury>`_ + + ]]></help> - <citations> - <citation type="doi">10.1093/bioinformatics/btaa025</citation> - </citations> + <expand macro="citations"/> </tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/assembly_test.fasta Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,2 @@ +>Test_sequece_purge_dups +ATGCCAGAGCACGTGGTCCAATGCAAGTATTGACGAGACAGCCTGTAGAGGGTAGATCGAGAGACGGTGGTTTAAGATTCGGTGAGATGGAACGTGACTGTATGATTGCTCATGGTGCTGCCTCATTCTTGAAGGAGAGATTAATGGAAGCATCCGATGCCTTTAGAGTCCATATTTGTGGTATTTGCGGGCTGATGACAGTTATCGCGAAATTAAATCATAACCAATTTGAATGTAAGGGATGTGATAATAAGATTGATATTTACCAAATTCATATTCCATACGCCGCGAAGTTATTATTCCAAGAACTTATGGCTATGAACATTACACCACGTTTATATACCGATCGTTCGAGAGATTTTTAAGAAATAATGTTGTAACTCTAAGAAAGTAAAATAATAAAAAACATTTCATTTGTGCTGATCTTGCCAAAAAAAGGGTAAACAAGTAGGCAATAGTAATAAAATAAGAATGAAGCATTTCTTTTAATAAGCAGAGAGAACTTTCAAGCATTCAAAAAACACAAAAATAATGATGAATAAAATGGGACTCACAGTGTTTATTTATAGTCCTTGTTTCGCATTTTACCAAATTAAAATTTAATTTTATCAAGACATATTAATGAACTTTAGCGGAAAACCTTAAATATCCAAGTCATAAATAATGACTTATGTAAAAAGTTATAAGAAAAATATACGGTGTTCATTTTGGAACAATGTTGCTGTTACACACTGTTAAATATATNTAGTATTCATAAAAGAAAGAAGATTTTAATACGCGTTTTGATTAAAACTACATAACAGATAAATATATACATGGATTGAAGACTGCAAAAAGGATATATAAAAAAATGACAAATAATTTCAATAAGCTATTTCAATTGGTTAAAAATTGATTCTTTAAGAGGCTCTGGTATTGATGATTGCTCATGGGCAAAGGCAGTAATATTTTGTTTATAAGGGTTTTCACTTCCATCGAAAACTTTTAAGCGGTCTAACCGTTGCTTTCTCAATTTATTTTTAGGCAACATACCGCTAACTGCTTTTTTCAAAATTTCTCCAAATCCTTTATCGGCAACNACCTTGTTCATTGTCTGTAACTTTAGCTGACCAGGTCTACCTGAATGAGACCAGTAAGTCTTCTGCTCAAATTTCTTACCTGTTACACGGATTTTTTGGCAATTAGTCACTACTACGTAGTCTCCACAGTCTTGTGACGGATGATAGACCGGCTTATGTCTACCAATTAAGGTAATTGCAATTGCTGAAGCCAATCTACCCAATGTCCTCTTATCACGGGCAACGTCGACATGGTGCCAAAGGCGCGCAAAAGCCAAGCCACTGTGTCCAATCTTCTGCGACATGAATAGGCTATTGTTGATGCTGGTATTGCTTTCTTTTTCTATATGATATCAGTGTATTCATAAGGTCTTTCTCTTTTACTTATTTAGAACGTTTTAAAGATCTCTAAACTACAAGGAAGGCTCCATGCGGGTAACAATCAACATTATAACGATAATTAACTAAACCATAACCGTCTAAGTAACCATAGCGTGCGGTGATTCTTCGCTAGATGGAACTCATGTCTTACTAGTAGCGTGTTTGGTACGTGCAATATAGAGCAAAACATTATATAGACATCGTAATAGCTTTTTATGTGCGGACTGTAATGTTTGTAAGAAGTAAAACCAGTCACTAATATAGTGAAAAAAAGTCAACTTATCGATCTATGTATCTCATAGAAGATGTATTGATTTAATATAACTTATAAAGGTGCTTCTACAGTAAGGTGCTGAGAGGACTTACTATGTCGGCAACAAGTTCAAATCTGAAGCTCTGAGGATTTCGCGAGATGCGCACAATCTGAAGTAATATAAAGATGAAAACACAATACAAAAGGCCTGAAAATCTATATGTCCGATAAGATATCATAGTATTCTTACTCGCAAGCACACATCAGGTACTTGGAAGTGTATGATGAGGTATNAATGGTGGCTTTATTTAGTATATGCCATCGGCCTAATGCTATGCCTAGGCCCGTCGTATATTCATCCAGATGAACATTTCCAATGCATCGAGATTTTGGCTATGCAGTTCATGAAGGTCAAAGGTACCATCCCATGGGAATTTAAATCAAAATTTGCTGCTAGGAGTTACGGCCCCCTATTATTGGTTTACGGGCCTTTGTTCACTATTTTAGAATCTTTTCCCCGAAATTCAGGACAACCCAGCGTTAATTCTGTATTCGATGAGACTACAAAACTATGTGATGTACCTATTGTGCTATCATTTTTTAATACCTAAATTAATAAGGGATGAGAGAAAGGCCGTACAATTCATCAAAAAAAGTCTACTTTTAACTTCTTACGTAACCTGGACGTACCAAACACACACGTTTTCCAATTCCATAGAAACGCTGGCTTTAATCTCAACTTTAACTGTAATGGAAGATATGGTAAACGAAAAAAATATTCAAAGAAGTAATTTCAAAAATTCGGTTATATTGGGACTTATATTTAGTTTTGGTGTTTTTAATAGAGTTACTTTTCCTGCATTTATTTTCTTACCATGTTTGATATTATTCTGGAAGTTTTACCGGGTCCATTGGAAATCCTTTTCTTTACTTTTACTTTCATTTTCATTTTCCTCGTGTCTATTTGTTCTTATTGATACAAATATTTATAACAACGGAAAGGGATTTGTCATTACGCCCTTGAATAACCTGAAATACAACCTCAATGTCCAAAATTTGCAAGTACATGGATTACATCCAAGATACACCCATCTGCTGGTCAATTTACCTCAAATAGTTGGCCCAGTATTGCTGCTAGCGATTTTTTCCGGTTACAAACTCGATAAATTATCTACTTACGCAATCATATCTGGCCTGCTTTTTCTTTCATTCTTTCAACATCAAGAATTAAGATTCCTTGTACCGCTAGTGCCACTACTCGTGACAAACTTAAACTGGACACCTCTGAGTTCCACGTTAGTAAACAAGAAAATTTTCAAGGGAACTTGGCTTCTTTTTAACATAATCATGGCGTTCATCATGGGAATTTCACATCAAGCAGGAATTATCCAATTTTTGGGAGATTACTTCCACTTTCGTACCGAACAAATGGGCGTTCACATATGGTGGAAAACATACTCACCACCCACCTGGATGTATATGAGCAATAACCTAACCGTTTCTTCTCTTATCAATACACAGGATGGTATTGAGTCGATAGATGAAGTGGCATTCAGTNTAGGTAACCATCATGTAATAGACCTTAAAGGCTGTGATTTACCACTTTTAACAGAAACAATTAGGCGGCTGCGTTTAAACGGGTCCATAACTCCACTAACTTTAGTAACTCCCAATTCCATGACATCAGAATTGAAAAAGTTGAAGAGAGATGGCACTATTAACTTAATACCCAAAAGAAATTACTTGTTCCATTTGGATTTGGATCATCTTGATTTCAATGATTTCACGACTTTTAAGCCAGGGCTAACAGTGTACTCCATCGAACTACTATAAGACCAGCTATATGAGGAGTTATGCATATATTATGGCTGTGAATTTAAGTTTAAATGATCTTATCCTAGGTATTCTTATAAAAAAGAAGAGTGCTTTAATCGAGCAATGGTTAACTATTTGTTGCATACTCATTTTTTCCCATTGAAATCTCTAATTGTAGGCTGATACAAACTCGGTACTCAGCTCAAGATAGGATTGTTAGTTCTGATATGCAATCTTATTAATCTATGTATAGTACACAACTGTATGAAAACCTCCCGAAGTCTAAGTAAAGCTCCATTGATGTTCTCTTGCTGTTAAGTATTATATTACTCCATAACCAAATCTGTGTTCACACGTACTACAAGCTTGACATGATACTGACCATAGTACATGTGCAAGTTATTCAAACTAAGAATTACAGAGCTTCATTTGTCACAGTCACTTCATACTACTATGCTTCTAATGCTTCTAATATTTATGCATTGCAGGTTCAACATGCAACACTTGGGTTCTCAATGATCTGGCGCTATCATTTGTTACCCGACCGTGCGTAGAAAAAAATGTAAAAATATAGGAATAGCTGTTTTAAGTTATTAAGGTAATAATGCACGTCGAGCGATGGTAGGTAAAATGTCTAGAGGCATATCTAGGATGTAGAATGAGCAAGTTTTCACTTAAGTTGGGGAGTAAGACCTTGAAAAAAAATATTTCCAAGAAGACGAAAAAAAAAAACTCATTACAGAAGGCCAACTTATTCGATTGGGATGATGCGGAAACTGCAAGCCTTTCGCATAAACCTCAAAGTAAGATAAAGATTCAAAGTATTGATAAATTCGATCTTGATGAAGAATCATCTTCTAAGAAGAAATTAGTGATCAAGCTGAGTGAAAATGCGGATACCAAAAAAAACGATGCTCCTCTGGTGGAATATGTCACCGAAAAAGAATATAATGAGGTACCTGTCGAGGAATTTGGAGATGCTTTACTTCGGGGTATGGGGTGGGAAAGTGACTCCGAGCAAGATTCTAAAGGCGACAAGACACAGAGTCGAAACAAGGACGTTTCAAATGTTTCACAGATACATCCTGATGGACTGGGAATTGGTGCCAAGTTAAATAAGGCAATAAACGTGGAGGAGGCTTCATTTATGCCCGTCGTAAAAATCGATAAAATAACGGGCACTAAAGTTGATGACGACAAAAAAAATAAGTCATGAGAAAGTTTGAATATATAATTTAAAGTACTTGGTATATACACATTATATTTTATGCATGTTCCGAAGGAGGTATTTTTAGTTTGGCTTTTTTTTCTTATTTTTTCTTCAATTTACTTGATAAATGAAATGCAAGGAAGTTCAGTTTGATATTATATAAGCAATAGTCAAACCATGGCACCAAACCCAAACAACAATAATTGGGATGCAAAGGTAGTACCCCATTGTTTCATCCAATCATTTTTGTTTTTAAACTCCCAATCTTCTACTATTTTGGTTAAATCAACATATAGCTCCATGGTAATTTGGTCTAGTATTTGATTAATGTTAATAAGCTGTAAATCTGACAAGTTTTTGACCATCTTACAGCGTAAAACAATTTCGTTTGCATTAGTATTTGGTTGATTATGAAACTTGATGATTTCCTTCGTGGAATTGGAAGTGACTTTTGTAGTTAAAGGATAAGATTTCCTTTGCCTATTAATCGATACATTTGGCGAGTTCCAGATTATGGAATTGGTCAATCTCTCGTTTTCCGAGAAATCTTTCAATATAGGATTAGCCATCCCTTCATATGAGTTAATAAATGTTATTATAGGTTTCAATTCATCCAATGAAACAATACTGTCACCTGTCGATAATACTGGAGGTTCCTGAGGGAAAGTTGTCTTCAAGTCCCTACAAGTTACCTTNAAATCCACCACTGCATATTTCGACTCCGATGATAGATGAGAAGTAGAATTTGTTAGCATTATGTCAGCAAGTATTTCAACTTGGCCGTCTTTCAACCAGTTGAACTTACCATCGCCATTAAATTTTAAATCATTAATGTTGATAAAGTTCAATCTTAACGTCGTTACATAATTCGGATCATCCTGATGAGTCACTGTGCGGTAATTTTCCTGATTGTTGTCCGTGAAATCAAACTTCGAGCTTGCCATCCTATTTTTGTTATTATTTTCAATAACTGCTGTTAACTTTTGTTGCCTCTTAAATAAGTTGAAAAGAGAATTATTAATTGAACCAGAAAATGTTTTGGCACTCAGAATATCAGAAATAAAATGGTTCAGTCTTAGTCGTGGTAAAGATAGATTGTAAATGGAAAATTTTAGACTCGGAGTTTCCTGGGCACTCAGAGATTGTTTCAAAAGAATTTCTGAGTCAGTAATTTCAACGTTATTTAAAGTTTTCAAAAAATTCTCCGTCTTTTGATCTCCTTGAAAAGAGTTTACTAAATTGATGAAATTGGATAAGTTCAAACATCCTCTAATACCGTATATTGAAACATTTGTAATTAGTCCCCTGCCAAGTAACCAATTTTTTAGGGAAACATTCAGGTTAATGTGGTGAAATTTTAAGTCTAAGTCCAAAATCTCATCCCTGACATTTAGCCTTTTTATAAGTATTGAATTTGACTCCCAGTCTGGAGAGAGCACAAGCATTGATGCTTTATCTTCCGGAGAAAATGTGATTTCCAAATCTTGATTGGAGCACTTATGATCTTTCAACAACCATTTTAGAAGCCTTTCATAGATTTTCTTCTCATGGATGTATTCCTGACTGAAAACAGAGTTAATGACGAATAGATAGAACGAAATGAAAGTGGTGGTGCTCAGAATGAGCCATAGAATTTGTGACAATATCAGCCAAGACGCTATAATACTTATTTCATTCAGAGAGAACGGCCTGTTGTTTTTAATAAGAATCCACTTTAGATTGATTTTGAACCTTTCTTGAAAATTCTTTGCATCTGCTAGAAGCGATTGCTTGAACTCTCGCTCATTATTTTTTCTCAGCAAAATAGTCTCAATATTGGAAGCCTTGGTAGTGAACTTGTCATTGCTTGGAAATGTTCGGATGTGCCTTTGGGCGATCAAACATCTAACAGGTAACGAACTCTTGTAAGGTGTTATAAAAGGTCTGACATTTCCATGATTAGTTGCGACGTAAGTTCGAATACAGTGTCTTACGAGATGACTTGTAATTGGAAGCAGTGGCCGCTTTATTGTAGGGACCCGTAAACGTGTGATTAGCATGAATTTTATAAACCTCCCACCACCTGATAATCTGTATGTGCCTTTTGTTTTAATACTTCTTGACGCAAATCTACTGTCAACTTTAATATGCATCCCTCCATAGTAAGTCAAGGATCAGCTAGAACCAATAACGAGAAGTAAAAAAAAGTGACAAAAAGTCAAATGTGTCTTTATACGAATTTTTTAACCTACATATGAAGAGTAAGGTCATAAATAATAAATGTAGGGCTAAATGCAGTTAAGATTACTACAGTATTAGGTCTGTTTTTTATCACCTCTTACGGAAAGTGCGAGCGGGAAAAAATTTTTCTTCTTTCCTTATTATCATACCGATGCTCATCACAATGAAAGATACATATTGCATCAATAATAGGCAGTTTTCAATATTCTTCTGTTTAGTTAAGAAAAAGACTTGAAGTGAAAATAAACTACATTATGGTTGCGCCTACTGCTTTGAAAAAGGCTACTGTGACACCTGTAAGTGGACAAGATGGGGGCAGTAGTAGAATTNTAGGAATAAATAATACCGAAAGCATCGATGAGGACGATGATGACGACGTTCTGTTAGATGATTCCGACAATAACACAGCAAAAGAAGAGGTAGAGGGCGAAGAAGGTAGCCGGAAAACGCACGAATCTAAGACCGTAGTGGTTGATGACCAGGGGAAACCTCGCTTCACTTCAGCTAGCAAAACACAGGGTAACAAAATAAAATTTGAATCGAGAAAGATCATGGTTCCACCACACAGAATGACACCCTTGAGGAACAGTTGGACAAAAATTTATCCTCCTTTGGTCGAGCACTTGAAGCTGCAAGTCAGAATGAATTTAAAGACCAAATCCGTAGAACTAAGAACGAATCCTAAATTTACCACAGACCCTGGTGCGTTGCAAAAAGGGGCCGATTTTATCAAAGCCTTTACCTTAGGGTTTGATCTTGACGATTCTATCGCACTATTGAGGCTAGATGATTTATATATTGAGACTTTTGAAGTCAAAGATGTCAAGACTCTAACAGGTGACCATTTGTCGAGAGCCATCGGTCGTATTGCCGGTAAAGACGGTAAAACGAAATTTGCGATTGAAAACGCTACAAGAACAAGAATTGTCTTAGCTGACTCTAAAATCCACATTTTGGGCGGGTTCACCCACATCAGAATGGCAAGAGAATCTGTGGTTAGTTTAATTTTGGGTTCCCCTCCAGGTAAAGTTTATGGGAACTTACGTACCGTTGCATCTAGATTAAAAGAACGCTACTAAACATAATTTGTGGGCTTTCATCATCTGTATAATATTTATATGTCGTTTTATGGCGAAATAGAGTGAATAAATAGGTTTTTTTTTCCTTCTTTTTTTTAGGACGCCAAACGCGTAACGTTAGCGGTGATAAATTAGTTTAGTATTATTATCCGGCTATTTGCTTCATGTATTTAACGTCTTCACTGACCACCTTCGCTGCACTAAATCGTATGGTACCATAGCATTAATCTTTTTGAATCAGAGAAGGTTTTCCAATGAAAAGGCACGTGTCTTTATCTGATATATTGACAGGAAATAAGAGAAAAGTGAGAAGACAAGATGCTCTACAGATTACCATCGATGACGAAAATGATACTGAATCAGGCACTTTTGACGCCAGAACAGCCAAACATGACGATTCTTCAGTAATATTTTTAAACCACTCTGTTGTGAAGCCAATTGAAGCTGTTTCTACTAATCACAAATCTGCAAAGGAGTTTTTGATGACGAAACGCACAAAAGAAAAATGCGATGACGACGATGATGATCTTATTGTAATCAGTGATAAGAGTCCCAAAAGTGAGACTAATTGTAGCAAAATTGCACTTTCGCAGGAGCATGAAGATGATATTTCTATAATTTCCACATCGAGAATCAAATCATCGCTTCTTAATGAAAGAGCATCAAAGATTAAAAACTTCCTTAAACATGAGACAACCGACACGTTCAAAAGATTAAATAGCATCTCTAAACTAAATGAAATAGAGCCACCATTACCATTACATCAATCGATTTTCCCAGTAGGTGACAAAGAGCTGTCAGATCGGAGTGTTGATATCCCGCTTCCTTTCCGCACAATACCGCCATTAAATCATAATTTTCTTCCTAGTGACTATGAATCGTTGAAAGACAAGAATTCAGCATCTTGTATTCCTGTTCGCTATCAAGCACCGGTATTACTTGGCACAAATATTAAAAGAAATACAACTCTCACATGGCCGCAGCTATTCAAGCCTGTCACTTTAAAACAAGTATTAATTGAACCCAAATTGAAACTTCGAATCAAAAATTGGATTGAAACATCCTTTCATACGCTAGAAAAGCCTACCTTGAGGAACCGTCTATNGAACAGAATAAATCCCAATAAACAACAGGGATCTGGTGATGAGCTTGCCAACTTCATTGTACCTGATCTCGAAGAAGACGAAAACTTGCGTCCAGATTTCTACAGAAATGGCGAAGCAAATAGCAGCTTGAGCGAATTTGTTCCACTAATGATATTACACGGAAATTCAATAGGCAAGAAAACGCTGATACAGACAATCATGAGAGAGATTGCTGGCGACGATAATTCTTACCAGATATATGAAGTTAATTCAAACATGAACAGGAGCAAAAAAGATTTGCTTGATATCCTACTAGATTTTACCACCACACACTATGTCAAAGATTCCTCAAAAAGGAAAAGTGACTACGGGCTTGTTTTATTTAATGATGTTGATGTTTTATTTAAAGAACATGATAGGGGATATTGGGCAATGATCAGCAAGCTTTGTGAATTTTCACGAAGGCCCCTCGTATTGACTTGTAAGGATTTGTCACTAGTTCCTAGTGAACTTATTGCCTTGGCAAGTGAACAAAACTCTTTGTTTCATACTAAGAAAATTAGTACATCCACAGTCTATGCGTTTCTAACAAAATATTTAAAGTCCCTTGAAATCGAAGTTTGTGACGACTGGCTTCGCGATGTTGTAAAACAAAATAATGCGGATATTAGGAAGTGCTTGATGCACTTGCAGTTTTGGTGCGTTGATACTGGGGCTGATTTGATTTCATCCAAGAACAGACTACCGGTCCTAACATCAACTCTTGGTTCAAGCGTTAAAGATATATCGCAATTAACTGATCTACTCTCCATAAATGATGTTATTGGTCAAGCAACGCTCAATCGTTCCATGGTTAGACAAGAAATAGATTCTACCACAATGACCCCAGAAAAAGTTAATACTTTCCAGGATCAAAATCTGGATGATGAAATGAAATTAAAATTTGATTACGTGATAGATTATAAATTGCATTTAAATGACCCCAATAGACAACCATTATTACCCTTTGAATTGAATATTTACCAACACATCCAAGAACAATTGGAAGCTCGGTATTCCTATGTTAGAGAAGCAAACCA
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/assembly_test.paf Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,245 @@ +gi|568815454:1200216-1203631 3416 0 3416 + gi|568815529:1421891-1425306 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M +gi|568815454:1200216-1203631 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M +gi|568815454:1200216-1203631 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M +gi|568815454:1200216-1203631 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|568815454:1200216-1203631 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|568815454:1200216-1203631 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|568815454:1200216-1203631 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|568815529:1421891-1425306 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M +gi|568815529:1421891-1425306 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M +gi|568815529:1421891-1425306 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|568815529:1421891-1425306 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|568815529:1421891-1425306 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|568815529:1421891-1425306 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|568815551:1197321-1201446 4126 0 4126 + gi|568815567:1196244-1200852 4609 483 4609 4061 4126 0 NM:i:65 ms:i:7862 AS:i:7862 nn:i:0 tp:A:S cm:i:604 s1:i:3595 de:f:0.0158 rl:i:0 cg:Z:4126M +gi|568815551:1197321-1201446 4126 793 4126 + gi|568815564:1286641-1289973 3333 0 3333 3333 3333 0 NM:i:0 ms:i:6666 AS:i:6666 nn:i:0 tp:A:S cm:i:615 s1:i:3324 de:f:0 rl:i:0 cg:Z:3333M +gi|568815551:1197321-1201446 4126 641 4126 + gi|568815561:1196951-1200436 3486 0 3486 3409 3487 0 NM:i:78 ms:i:6504 AS:i:6504 nn:i:0 tp:A:S cm:i:456 s1:i:2855 de:f:0.0221 rl:i:0 cg:Z:235M1I1996M2D1253M +gi|568815551:1197321-1201446 4126 706 4126 + gi|568815569:1240288-1243708 3421 0 3421 3343 3422 0 NM:i:79 ms:i:6368 AS:i:6368 nn:i:0 tp:A:S cm:i:455 s1:i:2819 de:f:0.0228 rl:i:0 cg:Z:170M1I1996M2D1253M +gi|568815551:1197321-1201446 4126 701 4126 + gi|568815592:29942469-29945883 3415 0 3410 3296 3432 0 NM:i:136 ms:i:6078 AS:i:6078 nn:i:0 tp:A:S cm:i:381 s1:i:2471 de:f:0.0334 rl:i:0 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1000M +gi|568815561:1196951-1200436 3486 65 3486 + gi|568815569:1240288-1243708 3421 0 3421 3398 3421 0 NM:i:23 ms:i:6704 AS:i:6704 nn:i:0 tp:A:S cm:i:574 s1:i:3257 de:f:0.0067 rl:i:0 cg:Z:3421M +gi|568815561:1196951-1200436 3486 0 3486 + gi|568815567:1196244-1200852 4609 1124 4609 3435 3487 0 NM:i:52 ms:i:6660 AS:i:6660 nn:i:0 tp:A:S cm:i:518 s1:i:3068 de:f:0.0146 rl:i:0 cg:Z:235M1D1996M2I1253M +gi|568815561:1196951-1200436 3486 152 3486 + gi|568815564:1286641-1289973 3333 0 3333 3257 3335 0 NM:i:78 ms:i:6200 AS:i:6200 nn:i:0 tp:A:S cm:i:426 s1:i:2708 de:f:0.0231 rl:i:0 cg:Z:83M1D1996M2I1253M +gi|568815561:1196951-1200436 3486 60 3486 + gi|568815592:29942469-29945883 3415 0 3410 3298 3434 0 NM:i:136 ms:i:6084 AS:i:6084 nn:i:0 tp:A:S cm:i:380 s1:i:2501 de:f:0.0328 rl:i:0 cg:Z:175M1D1036M1I126M4I149M17I495M3D165M2I18M1D238M3D1000M +gi|568815564:1286641-1289973 3333 0 3333 + gi|568815567:1196244-1200852 4609 1276 4609 3271 3333 0 NM:i:62 ms:i:6294 AS:i:6294 nn:i:0 tp:A:S cm:i:459 s1:i:2836 de:f:0.0186 rl:i:0 cg:Z:3333M +gi|568815564:1286641-1289973 3333 0 3333 + gi|568815569:1240288-1243708 3421 87 3421 3256 3335 0 NM:i:79 ms:i:6194 AS:i:6194 nn:i:0 tp:A:S cm:i:439 s1:i:2735 de:f:0.0234 rl:i:0 cg:Z:83M1I1996M2D1253M +gi|568815564:1286641-1289973 3333 0 3333 + gi|568815592:29942469-29945883 3415 92 3410 3206 3340 0 NM:i:134 ms:i:5906 AS:i:5906 nn:i:0 tp:A:S cm:i:370 s1:i:2404 de:f:0.0338 rl:i:0 cg:Z:1120M1I130M3I1M1I144M17I495M3D183M1D238M3D1000M +gi|568815567:1196244-1200852 4609 1189 4609 + gi|568815569:1240288-1243708 3421 0 3421 3368 3422 0 NM:i:54 ms:i:6518 AS:i:6518 nn:i:0 tp:A:S cm:i:514 s1:i:3034 de:f:0.0155 rl:i:0 cg:Z:170M1I1996M2D1253M +gi|568815567:1196244-1200852 4609 1184 4609 + gi|568815592:29942469-29945883 3415 0 3410 3293 3432 0 NM:i:139 ms:i:6064 AS:i:6064 nn:i:0 tp:A:S cm:i:374 s1:i:2444 de:f:0.0340 rl:i:0 cg:Z:1212M1I126M4I149M17I495M3D183M1D238M3D1000M +gi|568815569:1240288-1243708 3421 0 3421 + gi|568815592:29942469-29945883 3415 5 3410 3289 3429 0 NM:i:140 ms:i:6050 AS:i:6050 nn:i:0 tp:A:S cm:i:388 s1:i:2487 de:f:0.0341 rl:i:0 cg:Z:170M1D1036M1I126M4I149M17I495M3D165M2I18M1D238M3D1000M +gi|342187237:5004-8419 3416 0 3416 + gi|568815529:1421891-1425306 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M +gi|342187237:5004-8419 3416 0 3416 + gi|568815454:1200216-1203631 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M +gi|342187237:5004-8419 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M +gi|342187237:5004-8419 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M +gi|342187237:5004-8419 3416 0 3416 + gi|528476637:29857558-29915771 58214 54784 58214 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1005M +gi|342187237:5004-8419 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|342187237:5004-8419 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|342187237:5004-8419 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M +gi|342187237:5004-8419 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M +gi|342187237:5004-8419 3416 0 3416 + gi|528476637:29857558-29915771 58214 0 3428 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:0 cg:Z:185M2I2M4I224M1D3M1I61M1I5M1D108M3D13M1I118M1I486M12I112M4D22M19D127M17D296M1I433M2I589M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M +gi|342187237:5004-8419 3416 3 3416 + gi|528476637:29857558-29915771 58214 38484 41952 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:0 cg:Z:34M1D52M1I123M2I1M1D255M1I4M1D11M1I21M1D12M4I3M1D2M1D4M2D59M3D33M3D38M1I3M2D60M1I25M1D277M1I327M1D132M16D164M5D6M2D207M2I74M7D52M20D363M1D41M3D90M1I103M6I96M1D6M1I117M1D2M1I208M1I132M2D26M4D60M1I165M +gi|342187237:5004-8419 3416 1488 3158 + gi|528476637:29857558-29915771 58214 8636 10269 1295 1729 0 NM:i:434 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2026 rl:i:0 cg:Z:35M1I414M1D3M1I7M1I12M3D44M20D84M3I2M2I2M10I42M1D3M1I9M3I2M4I21M1D24M2I2M4I11M9D11M1D1M1D11M4I8M1D4M1D8M4I60M3I11M1D6M1D17M2I8M1D5M2D38M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M +gi|342187237:5004-8419 3416 891 1307 + gi|528476637:29857558-29915771 58214 44457 44873 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:0 cg:Z:416M +gi|528476637:29857558-29915771 58214 53600 58209 + gi|568815567:1196244-1200852 4609 0 4609 4559 4609 0 NM:i:50 ms:i:8918 AS:i:8918 nn:i:0 tp:A:S cm:i:729 s1:i:4180 de:f:0.0108 rl:i:25 cg:Z:4609M +gi|528476637:29857558-29915771 58214 33375 41952 + gi|528476637:29857558-29915771 58214 49822 58214 7180 8967 0 NM:i:1787 ms:i:8814 AS:i:9504 nn:i:0 tp:A:S cm:i:225 s1:i:2063 de:f:0.1118 rl:i:25 cg:Z:24M4D11M3I103M2I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I137M310D48M4I225M6I3M1D3M350I6M2I46M1D379M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D236M1D10M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D165M +gi|528476637:29857558-29915771 58214 49822 58214 + gi|528476637:29857558-29915771 58214 33375 41952 7180 8967 0 NM:i:1787 ms:i:8814 AS:i:9504 nn:i:0 tp:A:S cm:i:225 s1:i:2063 de:f:0.1118 rl:i:25 cg:Z:24M4I11M3D103M2D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D137M310I48M4D225M6D3M1I3M350D6M2D46M1I379M1D54M1D85M2D21M1D6M90D167M1D74M1I1M2I236M1I10M4I48M19D109M4I346M1D52M1I125M1I271M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I311M3I2M1I14M1D148M1I170M7D207M2I66M2D5M6D2M1I39M3D10M20D173M1D189M1D41M3D8M3D79M1I103M6I96M1D6M1I328M1I132M2D26M4D60M1I165M +gi|528476637:29857558-29915771 58214 54083 58209 + gi|568815551:1197321-1201446 4126 0 4126 4107 4126 0 NM:i:19 ms:i:8138 AS:i:8138 nn:i:0 tp:A:S cm:i:726 s1:i:3964 de:f:0.0046 rl:i:25 cg:Z:4126M +gi|528476637:29857558-29915771 58214 54876 58209 + gi|568815564:1286641-1289973 3333 0 3333 3317 3333 0 NM:i:16 ms:i:6570 AS:i:6570 nn:i:0 tp:A:S cm:i:578 s1:i:3203 de:f:0.0048 rl:i:25 cg:Z:3333M +gi|528476637:29857558-29915771 58214 54724 58209 + gi|568815561:1196951-1200436 3486 0 3486 3417 3487 0 NM:i:70 ms:i:6552 AS:i:6552 nn:i:0 tp:A:S cm:i:469 s1:i:2920 de:f:0.0198 rl:i:25 cg:Z:235M1I1996M2D1253M +gi|528476637:29857558-29915771 58214 54789 58209 + gi|568815569:1240288-1243708 3421 0 3421 3347 3422 0 NM:i:75 ms:i:6392 AS:i:6392 nn:i:0 tp:A:S cm:i:462 s1:i:2853 de:f:0.0216 rl:i:25 cg:Z:170M1I1996M2D1253M +gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815592:29942469-29945883 3415 0 3415 3305 3437 0 NM:i:132 ms:i:6112 AS:i:6112 nn:i:0 tp:A:S cm:i:393 s1:i:2554 de:f:0.0322 rl:i:25 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815454:1200216-1203631 3416 0 3416 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:25 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815529:1421891-1425306 3416 0 3416 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:25 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|528476637:29857558-29915771 58214 37198 41947 + gi|568815567:1196244-1200852 4609 4 4609 4086 4791 0 NM:i:705 ms:i:5600 AS:i:5670 nn:i:0 tp:A:S cm:i:117 s1:i:1106 de:f:0.1146 rl:i:25 cg:Z:48M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D236M1D10M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I217M3D9M3I48M1D311M1D2M3D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|528476637:29857558-29915771 58214 37770 41947 + gi|568815551:1197321-1201446 4126 0 4126 3656 4215 0 NM:i:559 ms:i:5146 AS:i:5146 nn:i:0 tp:A:S cm:i:119 s1:i:1088 de:f:0.1156 rl:i:25 cg:Z:216M1D10M4D48M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|528476637:29857558-29915771 58214 0 3423 + gi|568815567:1196244-1200852 4609 1184 4609 3154 3460 0 NM:i:306 ms:i:5116 AS:i:5116 nn:i:0 tp:A:S cm:i:190 s1:i:1543 de:f:0.0767 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|528476637:29857558-29915771 58214 0 3428 + gi|528476637:29857558-29915771 58214 54784 58214 3155 3464 0 NM:i:309 ms:i:5110 AS:i:5110 nn:i:0 tp:A:S cm:i:202 s1:i:1617 de:f:0.0775 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|528476637:29857558-29915771 58214 54784 58214 + gi|528476637:29857558-29915771 58214 0 3428 3155 3464 0 NM:i:309 ms:i:5110 AS:i:5110 nn:i:0 tp:A:S cm:i:202 s1:i:1617 de:f:0.0775 rl:i:25 cg:Z:185M2I2M4I225M1D2M1I61M1I5M1D108M3D13M1I118M1I486M12I138M19D440M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M +gi|528476637:29857558-29915771 58214 5 3423 + gi|568815569:1240288-1243708 3421 0 3421 3148 3458 0 NM:i:310 ms:i:5086 AS:i:5086 nn:i:0 tp:A:S cm:i:191 s1:i:1564 de:f:0.0774 rl:i:25 cg:Z:167M1D2M2I9M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|528476637:29857558-29915771 58214 0 3428 + gi|568815529:1421891-1425306 3416 0 3416 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:25 cg:Z:185M2D2M4D224M1I3M1D61M1D5M1I108M3I13M1D118M1D486M12D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|528476637:29857558-29915771 58214 0 3428 + gi|568815454:1200216-1203631 3416 0 3416 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:25 cg:Z:185M2D2M4D224M1I3M1D61M1D5M1I108M3I13M1D118M1D486M12D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|528476637:29857558-29915771 58214 0 3423 + gi|568815561:1196951-1200436 3486 60 3486 3144 3463 0 NM:i:319 ms:i:5042 AS:i:5042 nn:i:0 tp:A:S cm:i:188 s1:i:1556 de:f:0.0799 rl:i:25 cg:Z:172M1D2M2I9M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|528476637:29857558-29915771 58214 0 3423 + gi|568815551:1197321-1201446 4126 701 4126 3137 3459 0 NM:i:322 ms:i:5022 AS:i:5022 nn:i:0 tp:A:S cm:i:196 s1:i:1569 de:f:0.0814 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M +gi|528476637:29857558-29915771 58214 0 3428 + gi|568815592:29942469-29945883 3415 0 3415 3134 3463 0 NM:i:329 ms:i:5014 AS:i:5014 nn:i:0 tp:A:S cm:i:206 s1:i:1582 de:f:0.0799 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D485M10D1M1D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|528476637:29857558-29915771 58214 92 3423 + gi|568815564:1286641-1289973 3333 0 3333 3053 3367 0 NM:i:314 ms:i:4886 AS:i:4886 nn:i:0 tp:A:S cm:i:191 s1:i:1531 de:f:0.0813 rl:i:25 cg:Z:93M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M +gi|528476637:29857558-29915771 58214 38484 42085 + gi|528476637:29857558-29915771 58214 3 3561 3171 3642 0 NM:i:471 ms:i:4520 AS:i:4520 nn:i:0 tp:A:S cm:i:135 s1:i:1107 de:f:0.1103 rl:i:25 cg:Z:34M1I52M1D95M2I2M4I22M1D202M1D2M1I67M1D19M1I104M1I9M3I47M1I87M1I277M1D106M1D7M2I2M1D68M12I114M1D2M3D20M17D1M1D142M1D164M5I6M2I120M1I86M2D74M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D103M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I84M4I101M1I26M4I358M +gi|528476637:29857558-29915771 58214 3 3561 + gi|528476637:29857558-29915771 58214 38484 42085 3171 3642 0 NM:i:471 ms:i:4520 AS:i:4520 nn:i:0 tp:A:S cm:i:135 s1:i:1107 de:f:0.1103 rl:i:25 cg:Z:34M1D52M1I95M2D2M4D22M1I202M1I2M1D67M1I19M1D104M1D9M3D47M1D87M1D277M1I106M1I7M2D2M1I68M12D114M1I2M3I20M17I1M1I142M1I164M5D6M2D120M1D86M2I74M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I103M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D84M4D101M1D26M4D358M +gi|528476637:29857558-29915771 58214 38421 41947 + gi|568815561:1196951-1200436 3486 0 3486 3090 3555 0 NM:i:465 ms:i:4352 AS:i:4352 nn:i:0 tp:A:S cm:i:95 s1:i:919 de:f:0.1166 rl:i:25 cg:Z:97M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M1D2M3D14M1I148M1D170M7I207M2D74M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815592:29942469-29945883 3415 3 3415 3041 3495 0 NM:i:454 ms:i:4326 AS:i:4326 nn:i:0 tp:A:S cm:i:110 s1:i:990 de:f:0.1121 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I222M3D4M3I48M1D180M1I146M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M +gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815454:1200216-1203631 3416 3 3416 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M +gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815529:1421891-1425306 3416 3 3416 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M +gi|528476637:29857558-29915771 58214 38486 41947 + gi|568815569:1240288-1243708 3421 0 3421 3037 3486 0 NM:i:449 ms:i:4310 AS:i:4310 nn:i:0 tp:A:S cm:i:97 s1:i:949 de:f:0.1154 rl:i:25 cg:Z:32M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I82M2I3M1I32M3I40M1I62M1D25M1I277M1D311M1D2M3D14M1I148M1D170M7I207M2D74M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|528476637:29857558-29915771 58214 38573 41947 + gi|568815564:1286641-1289973 3333 0 3333 2962 3402 0 NM:i:440 ms:i:4198 AS:i:4198 nn:i:0 tp:A:S cm:i:100 s1:i:935 de:f:0.1145 rl:i:25 cg:Z:121M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|528476637:29857558-29915771 58214 3555 4654 + gi|528476637:29857558-29915771 58214 43020 44118 982 1103 0 NM:i:121 ms:i:1478 AS:i:1478 nn:i:0 tp:A:S cm:i:30 s1:i:230 de:f:0.1065 rl:i:25 cg:Z:156M1I416M3D62M3I27M1I156M1D277M +gi|528476637:29857558-29915771 58214 43020 44118 + gi|528476637:29857558-29915771 58214 3555 4654 982 1103 0 NM:i:121 ms:i:1478 AS:i:1478 nn:i:0 tp:A:S cm:i:30 s1:i:230 de:f:0.1065 rl:i:25 cg:Z:156M1D416M3I62M3D27M1D156M1I277M +gi|528476637:29857558-29915771 58214 48998 49823 + gi|528476637:29857558-29915771 58214 31581 32408 735 834 0 NM:i:99 ms:i:1062 AS:i:1062 nn:i:0 tp:A:S cm:i:17 s1:i:194 de:f:0.1134 rl:i:25 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D28M2D3M2D113M1I3M3I4M1I155M +gi|528476637:29857558-29915771 58214 31581 32408 + gi|528476637:29857558-29915771 58214 48998 49823 735 834 0 NM:i:99 ms:i:1062 AS:i:1062 nn:i:0 tp:A:S cm:i:17 s1:i:194 de:f:0.1134 rl:i:25 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I28M2I3M2I113M1D3M3D4M1D155M +gi|528476637:29857558-29915771 58214 1488 3170 + gi|528476637:29857558-29915771 58214 8615 10269 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:25 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M +gi|528476637:29857558-29915771 58214 8615 10269 + gi|528476637:29857558-29915771 58214 1488 3170 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:25 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M +gi|528476637:29857558-29915771 58214 39969 41686 + gi|528476637:29857558-29915771 58214 8615 10266 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:25 cg:Z:11M2I12M1D32M1I131M1I1M5I6M1I202M2D69M4I9M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M27I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D38M +gi|528476637:29857558-29915771 58214 8615 10266 + gi|528476637:29857558-29915771 58214 39969 41686 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:25 cg:Z:11M2D12M1I32M1D131M1D1M5D6M1D202M2I69M4D9M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M27D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I38M +gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815454:1200216-1203631 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815529:1421891-1425306 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815592:29942469-29945883 3415 1487 3157 1291 1726 0 NM:i:435 ms:i:944 AS:i:950 nn:i:0 tp:A:S cm:i:9 s1:i:103 de:f:0.2060 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M2I12M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 30702 31515 + gi|528476637:29857558-29915771 58214 45466 46301 718 857 0 NM:i:139 ms:i:940 AS:i:952 nn:i:0 tp:A:S cm:i:50 s1:i:326 de:f:0.1125 rl:i:25 cg:Z:36M2D6M1I4M3I8M3D14M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D197M7I1M2I3M1D15M2D1M1D138M3D41M +gi|528476637:29857558-29915771 58214 45466 46301 + gi|528476637:29857558-29915771 58214 30702 31515 718 857 0 NM:i:139 ms:i:940 AS:i:952 nn:i:0 tp:A:S cm:i:50 s1:i:326 de:f:0.1125 rl:i:25 cg:Z:36M2I6M1D4M3D8M3I14M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I197M7D1M2D3M1I15M2I1M1I138M3I41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815564:1286641-1289973 3333 1410 3080 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815551:1197321-1201446 4126 2203 3873 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|528476637:29857558-29915771 58214 56286 57956 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 56286 57956 + gi|528476637:29857558-29915771 58214 8629 10269 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:25 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I69M2I49M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815561:1196951-1200436 3486 1561 3233 1285 1737 0 NM:i:452 ms:i:874 AS:i:880 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2107 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I78M14D4M2D2M1I48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815567:1196244-1200852 4609 2686 4356 1284 1732 0 NM:i:448 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:9 s1:i:100 de:f:0.2132 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M3D1M5D58M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M1D1M1D11M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815569:1240288-1243708 3421 1496 3168 1284 1736 0 NM:i:452 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2118 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D3M8D48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|528476637:29857558-29915771 58214 27052 28249 + gi|528476637:29857558-29915771 58214 4739 5908 925 1206 0 NM:i:281 ms:i:726 AS:i:726 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2181 rl:i:25 cg:Z:100M1D5M1I139M7I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M +gi|528476637:29857558-29915771 58214 4739 5908 + gi|528476637:29857558-29915771 58214 27052 28249 925 1207 0 NM:i:282 ms:i:726 AS:i:726 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2174 rl:i:25 cg:Z:100M1I5M1D139M7D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815569:1240288-1243708 3421 885 1301 398 416 0 NM:i:18 ms:i:724 AS:i:724 nn:i:0 tp:A:S cm:i:39 s1:i:284 de:f:0.0433 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815567:1196244-1200852 4609 2075 2491 398 416 0 NM:i:18 ms:i:724 AS:i:724 nn:i:0 tp:A:S cm:i:39 s1:i:295 de:f:0.0433 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815592:29942469-29945883 3415 891 1306 398 416 0 NM:i:18 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:42 s1:i:282 de:f:0.0433 rl:i:25 cg:Z:321M1I94M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815561:1196951-1200436 3486 950 1366 397 416 0 NM:i:19 ms:i:718 AS:i:718 nn:i:0 tp:A:S cm:i:36 s1:i:274 de:f:0.0457 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 55675 56091 + gi|528476637:29857558-29915771 58214 44457 44873 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815551:1197321-1201446 4126 1592 2008 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815564:1286641-1289973 3333 799 1215 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|528476637:29857558-29915771 58214 55675 56091 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815454:1200216-1203631 3416 891 1307 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815529:1421891-1425306 3416 891 1307 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:25 cg:Z:416M +gi|528476637:29857558-29915771 58214 886 1289 + gi|528476637:29857558-29915771 58214 44457 44872 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:17 s1:i:133 de:f:0.0891 rl:i:25 cg:Z:324M12D79M +gi|528476637:29857558-29915771 58214 44457 44872 + gi|528476637:29857558-29915771 58214 886 1289 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:17 s1:i:133 de:f:0.0891 rl:i:25 cg:Z:324M12I79M +gi|528476637:29857558-29915771 58214 44457 44872 + gi|528476637:29857558-29915771 58214 39378 39792 361 418 0 NM:i:57 ms:i:496 AS:i:496 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1280 rl:i:25 cg:Z:85M3I4M3D48M1I274M +gi|528476637:29857558-29915771 58214 39378 39792 + gi|528476637:29857558-29915771 58214 44457 44872 361 418 0 NM:i:57 ms:i:496 AS:i:496 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1280 rl:i:25 cg:Z:85M3D4M3I48M1D274M +gi|528476637:29857558-29915771 58214 49208 49824 + gi|528476637:29857558-29915771 58214 7043 7661 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:25 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I8M1D4M2I25M1I11M1D5M1D2M2I4M1D4M1D7M5I7M1I133M1I49M1I29M4I5M3D3M1D53M +gi|528476637:29857558-29915771 58214 7043 7661 + gi|528476637:29857558-29915771 58214 49208 49824 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:25 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D8M1I4M2D25M1D11M1I5M1I2M2D4M1I4M1I7M5D7M1D133M1D49M1D29M4D5M3I3M1I53M +gi|528476637:29857558-29915771 58214 29092 29357 - gi|528476637:29857558-29915771 58214 28378 28643 236 265 0 NM:i:29 ms:i:356 AS:i:356 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1094 zd:i:1 rl:i:25 cg:Z:265M +gi|528476637:29857558-29915771 58214 28378 28643 - gi|528476637:29857558-29915771 58214 29092 29357 236 265 31 NM:i:29 ms:i:356 AS:i:356 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1094 zd:i:2 rl:i:25 cg:Z:265M +gi|528476637:29857558-29915771 58214 45137 45465 - gi|528476637:29857558-29915771 58214 14421 14731 269 329 0 NM:i:60 ms:i:318 AS:i:318 nn:i:0 tp:A:S cm:i:3 s1:i:42 de:f:0.1433 rl:i:25 cg:Z:35M1D115M1I2M14I113M1I28M3I16M +gi|528476637:29857558-29915771 58214 14421 14731 - gi|528476637:29857558-29915771 58214 45137 45465 269 329 0 NM:i:60 ms:i:318 AS:i:318 nn:i:0 tp:A:S cm:i:3 s1:i:42 de:f:0.1433 rl:i:25 cg:Z:14M3D30M1D113M14D2M1D114M1I36M +gi|528476637:29857558-29915771 58214 6307 7004 - gi|528476637:29857558-29915771 58214 6307 7004 528 727 0 NM:i:199 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2392 rl:i:25 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M8I5M1I8M1I5M1I10M1D5M1D5M1D8M8D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M +gi|528476637:29857558-29915771 58214 8056 8300 + gi|528476637:29857558-29915771 58214 8056 8376 225 321 0 NM:i:96 ms:i:258 AS:i:271 nn:i:0 tp:A:S cm:i:7 s1:i:51 de:f:0.0816 rl:i:25 cg:Z:129M77D89M1I25M +gi|528476637:29857558-29915771 58214 8056 8376 + gi|528476637:29857558-29915771 58214 8056 8300 225 321 0 NM:i:96 ms:i:258 AS:i:271 nn:i:0 tp:A:S cm:i:7 s1:i:51 de:f:0.0816 rl:i:25 cg:Z:129M77I89M1D25M +gi|528476637:29857558-29915771 58214 17754 17858 + gi|528476637:29857558-29915771 58214 17845 17947 98 104 0 NM:i:6 ms:i:172 AS:i:172 nn:i:0 tp:A:S cm:i:8 s1:i:52 de:f:0.0485 rl:i:25 cg:Z:13M2I89M +gi|528476637:29857558-29915771 58214 17845 17947 + gi|528476637:29857558-29915771 58214 17754 17858 98 104 0 NM:i:6 ms:i:172 AS:i:172 nn:i:0 tp:A:S cm:i:8 s1:i:52 de:f:0.0485 rl:i:25 cg:Z:13M2D89M +gi|157734152:29655295-29712160 56866 0 46508 + gi|528476637:29857558-29915771 58214 0 46366 45990 46508 0 NM:i:603 ms:i:90335 AS:i:90495 nn:i:85 tp:A:S cm:i:7995 s1:i:44368 de:f:0.0051 rl:i:96 cg:Z:412M1D2M1I907M4D23M18D6334M7I858M94I3086M37D2996M9D806M2D2326M89I5050M1D4412M2I3477M4D393M1D344M2I610M4I1397M1D4480M1I2166M2D10M2D209M2I678M2I1528M1D21M2I2527M2D17M1I7M2I1114M18I91M +gi|157734152:29655295-29712160 56866 12900 22956 + gi|528476637:29857558-29915771 58214 12858 22836 9939 10067 0 NM:i:128 ms:i:19554 AS:i:19623 nn:i:0 tp:A:S cm:i:5 s1:i:51 de:f:0.0031 rl:i:96 cg:Z:1820M9D806M2D2415M89I4926M +gi|157734152:29655295-29712160 56866 47082 56866 + gi|528476637:29857558-29915771 58214 48429 58214 9630 9801 0 NM:i:171 ms:i:18606 AS:i:18606 nn:i:0 tp:A:S cm:i:1505 s1:i:8643 de:f:0.0150 rl:i:96 cg:Z:179M2D335M1D587M2D3229M2I161M13I113M1I180M8D563M1D518M3D3903M +gi|157734152:29655295-29712160 56866 48470 56866 + gi|528476637:29857558-29915771 58214 33375 41952 7179 8982 60 NM:i:1803 ms:i:8784 AS:i:9498 nn:i:0 tp:A:P cm:i:223 s1:i:1956 s2:i:0 de:f:0.1112 zd:i:2 rl:i:96 cg:Z:24M4I11M3D103M2D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D133M325I52M4D50M1I175M6D3M359D48M1I379M1D54M1D84M3D21M1D6M90D168M1D72M2I2M1I236M1I10M1I48M19D109M4I346M1D52M1I123M2I1M1D254M1I5M1D11M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I311M3I2M1I14M1D148M1I170M7D207M2I66M2D5M6D2M1I39M3D10M20D173M1D189M1D41M3D8M3D79M1I103M6I96M1D6M1I117M1D2M1I208M1I132M2D26M4D60M1I165M +gi|157734152:29655295-29712160 56866 33497 42074 + gi|528476637:29857558-29915771 58214 49822 58214 7174 8964 0 NM:i:1790 ms:i:8766 AS:i:9456 nn:i:0 tp:A:S cm:i:227 s1:i:2051 de:f:0.1132 rl:i:96 cg:Z:24M4D11M3I103M1I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I137M310D48M4I225M6I3M1D3M350I6M2I46M1D379M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D247M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 33497 42074 + gi|157734152:29655295-29712160 56866 48470 56866 7171 8978 60 NM:i:1807 ms:i:8732 AS:i:9446 nn:i:0 tp:A:P cm:i:226 s1:i:1962 s2:i:0 de:f:0.1127 zd:i:2 rl:i:96 cg:Z:24M4D11M3I103M1I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I133M325D52M4I50M1D175M6I3M359I48M1D379M1I54M1I84M3I21M1I6M90I168M1I72M2D2M1D236M1D59M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D30M1I1M1I72M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 48470 56866 + gi|157734152:29655295-29712160 56866 33497 42074 7171 8978 60 NM:i:1807 ms:i:8732 AS:i:9446 nn:i:0 tp:A:P cm:i:226 s1:i:1962 s2:i:0 de:f:0.1127 zd:i:2 rl:i:96 cg:Z:24M4I11M3D103M1D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D133M325I52M4D50M1I175M6D3M359D48M1I379M1D54M1D84M3D21M1D6M90D168M1D72M2I2M1I236M1I59M19D109M4I346M1D52M1I123M2I1M1D254M1I5M1D11M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I307M4I20M1D148M1I172M2D2M1D271M1D3M1D2M1D2M4D40M3D10M20D173M1D189M1D41M3D8M3D79M1I30M1D1M1D72M6I96M1D6M1I116M1D3M1I208M1I132M2D26M4D60M1I165M +gi|157734152:29655295-29712160 56866 52256 56861 + gi|568815567:1196244-1200852 4609 0 4609 4503 4609 0 NM:i:106 ms:i:8582 AS:i:8582 nn:i:0 tp:A:S cm:i:628 s1:i:3840 de:f:0.0226 rl:i:96 cg:Z:189M1D518M3D3898M +gi|157734152:29655295-29712160 56866 52738 56861 + gi|568815551:1197321-1201446 4126 0 4126 4100 4126 0 NM:i:26 ms:i:8098 AS:i:8098 nn:i:0 tp:A:S cm:i:722 s1:i:3930 de:f:0.0058 rl:i:96 cg:Z:225M3D3898M +gi|157734152:29655295-29712160 56866 53528 56861 + gi|568815564:1286641-1289973 3333 0 3333 3317 3333 0 NM:i:16 ms:i:6570 AS:i:6570 nn:i:0 tp:A:S cm:i:585 s1:i:3212 de:f:0.0048 rl:i:96 cg:Z:3333M +gi|157734152:29655295-29712160 56866 53376 56861 + gi|568815561:1196951-1200436 3486 0 3486 3397 3487 0 NM:i:90 ms:i:6432 AS:i:6432 nn:i:0 tp:A:S cm:i:442 s1:i:2777 de:f:0.0255 rl:i:96 cg:Z:235M1I1996M2D1253M +gi|157734152:29655295-29712160 56866 53441 56861 + gi|568815569:1240288-1243708 3421 0 3421 3331 3422 0 NM:i:91 ms:i:6296 AS:i:6296 nn:i:0 tp:A:S cm:i:441 s1:i:2741 de:f:0.0263 rl:i:96 cg:Z:170M1I1996M2D1253M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|342187237:5004-8419 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815454:1200216-1203631 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815529:1421891-1425306 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815592:29942469-29945883 3415 0 3415 3305 3437 0 NM:i:132 ms:i:6112 AS:i:6112 nn:i:0 tp:A:S cm:i:396 s1:i:2527 de:f:0.0322 rl:i:96 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1005M +gi|157734152:29655295-29712160 56866 37319 42069 + gi|568815567:1196244-1200852 4609 4 4609 4082 4789 0 NM:i:707 ms:i:5566 AS:i:5636 nn:i:0 tp:A:S cm:i:119 s1:i:1112 de:f:0.1165 rl:i:96 cg:Z:48M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D247M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I217M3D9M3I48M1D307M4D20M1I148M1D169M3I276M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|157734152:29655295-29712160 56866 43615 46576 + gi|157734152:29655295-29712160 56866 43615 46614 2915 3042 0 NM:i:127 ms:i:5546 AS:i:5600 nn:i:0 tp:A:S cm:i:16 s1:i:120 de:f:0.0031 rl:i:96 cg:Z:1340M41D41I1438M32D17M6D6M2D100M2I17M +gi|157734152:29655295-29712160 56866 43615 46614 + gi|157734152:29655295-29712160 56866 43615 46576 2915 3042 0 NM:i:127 ms:i:5546 AS:i:5600 nn:i:0 tp:A:S cm:i:16 s1:i:120 de:f:0.0031 rl:i:96 cg:Z:1340M41I41D1438M32I17M6I6M2I100M2D17M +gi|157734152:29655295-29712160 56866 0 3406 + gi|528476637:29857558-29915771 58214 54784 58214 3161 3445 0 NM:i:284 ms:i:5194 AS:i:5194 nn:i:0 tp:A:S cm:i:208 s1:i:1674 de:f:0.0746 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 0 3401 + gi|568815567:1196244-1200852 4609 1184 4609 3157 3441 0 NM:i:284 ms:i:5182 AS:i:5182 nn:i:0 tp:A:S cm:i:194 s1:i:1592 de:f:0.0747 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|157734152:29655295-29712160 56866 5 3401 + gi|568815569:1240288-1243708 3421 0 3421 3152 3439 0 NM:i:287 ms:i:5158 AS:i:5158 nn:i:0 tp:A:S cm:i:196 s1:i:1628 de:f:0.0751 rl:i:96 cg:Z:167M1D2M2I9M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|157734152:29655295-29712160 56866 0 3406 + gi|568815529:1421891-1425306 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 0 3406 + gi|342187237:5004-8419 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 0 3406 + gi|568815454:1200216-1203631 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 37891 42069 + gi|568815551:1197321-1201446 4126 0 4126 3654 4213 0 NM:i:559 ms:i:5120 AS:i:5120 nn:i:0 tp:A:S cm:i:117 s1:i:1076 de:f:0.1174 rl:i:96 cg:Z:227M4D48M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|157734152:29655295-29712160 56866 0 3401 + gi|568815561:1196951-1200436 3486 60 3486 3149 3444 0 NM:i:295 ms:i:5120 AS:i:5120 nn:i:0 tp:A:S cm:i:189 s1:i:1603 de:f:0.0774 rl:i:96 cg:Z:172M1D2M2I9M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M +gi|157734152:29655295-29712160 56866 0 3406 + gi|568815592:29942469-29945883 3415 0 3415 3142 3440 0 NM:i:298 ms:i:5118 AS:i:5118 nn:i:0 tp:A:S cm:i:207 s1:i:1610 de:f:0.0770 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D485M10D1M1D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 0 3401 + gi|568815551:1197321-1201446 4126 701 4126 3142 3440 0 NM:i:298 ms:i:5100 AS:i:5100 nn:i:0 tp:A:S cm:i:198 s1:i:1597 de:f:0.0789 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|157734152:29655295-29712160 56866 0 3406 3142 3445 0 NM:i:303 ms:i:5080 AS:i:5080 nn:i:0 tp:A:S cm:i:193 s1:i:1577 de:f:0.0802 rl:i:96 cg:Z:185M2I2M4I289M1I5M1D108M3D13M1I118M1I486M12I112M4I20M1D442M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M +gi|157734152:29655295-29712160 56866 0 3406 + gi|157734152:29655295-29712160 56866 53436 56866 3142 3445 0 NM:i:303 ms:i:5080 AS:i:5080 nn:i:0 tp:A:S cm:i:193 s1:i:1577 de:f:0.0802 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M +gi|157734152:29655295-29712160 56866 53436 56866 + gi|528476637:29857558-29915771 58214 0 3428 3137 3464 0 NM:i:327 ms:i:5002 AS:i:5002 nn:i:0 tp:A:S cm:i:191 s1:i:1549 de:f:0.0827 rl:i:96 cg:Z:185M2I2M4I225M1D2M1I61M1I5M1D108M3D13M1I118M1I486M12I138M19D440M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M +gi|157734152:29655295-29712160 56866 92 3401 + gi|568815564:1286641-1289973 3333 0 3333 3058 3348 0 NM:i:290 ms:i:4964 AS:i:4964 nn:i:0 tp:A:S cm:i:193 s1:i:1559 de:f:0.0786 rl:i:96 cg:Z:93M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M +gi|157734152:29655295-29712160 56866 3 3539 + gi|528476637:29857558-29915771 58214 38484 42085 3172 3624 0 NM:i:452 ms:i:4586 AS:i:4586 nn:i:0 tp:A:S cm:i:136 s1:i:1127 de:f:0.1080 rl:i:96 cg:Z:34M1D52M1I95M2D2M4D22M1I272M1I19M1D104M1D9M3D47M1D87M1D222M5I3M5D47M1I106M1I7M2D2M1I68M12D279M1I164M5D6M2D120M1D86M2I74M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I103M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D84M4D101M1D26M4D358M +gi|157734152:29655295-29712160 56866 38606 42207 + gi|157734152:29655295-29712160 56866 3 3539 3166 3622 0 NM:i:456 ms:i:4550 AS:i:4550 nn:i:0 tp:A:S cm:i:135 s1:i:1116 de:f:0.1102 rl:i:96 cg:Z:34M1I52M1D95M2I2M4I22M1D272M1D19M1I104M1I9M3I47M1I87M1I222M5D3M5I47M1D106M1D7M2I2M1D68M12I279M1D169M3I121M1I162M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D30M1I1M1I72M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I85M4I100M1I26M4I358M +gi|157734152:29655295-29712160 56866 3 3539 + gi|157734152:29655295-29712160 56866 38606 42207 3166 3622 0 NM:i:456 ms:i:4550 AS:i:4550 nn:i:0 tp:A:S cm:i:135 s1:i:1116 de:f:0.1102 rl:i:96 cg:Z:34M1D52M1I95M2D2M4D22M1I272M1I19M1D104M1D9M3D47M1D87M1D222M5I3M5D47M1I106M1I7M2D2M1I68M12D279M1I169M3D121M1D162M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I30M1D1M1D72M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D85M4D100M1D26M4D358M +gi|157734152:29655295-29712160 56866 38606 42207 + gi|528476637:29857558-29915771 58214 3 3561 3162 3640 0 NM:i:478 ms:i:4470 AS:i:4470 nn:i:0 tp:A:S cm:i:132 s1:i:1092 de:f:0.1130 rl:i:96 cg:Z:34M1I52M1D95M2I2M4I22M1D202M1D2M1I67M1D19M1I104M1I9M3I47M1I87M1I277M1D106M1D7M2I2M1D68M12I110M4D26M17D1M1D142M1D169M3I121M1I162M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D30M1I1M1I72M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I85M4I100M1I26M4I358M +gi|157734152:29655295-29712160 56866 38543 42069 + gi|568815561:1196951-1200436 3486 0 3486 3089 3554 0 NM:i:465 ms:i:4338 AS:i:4338 nn:i:0 tp:A:S cm:i:95 s1:i:925 de:f:0.1177 rl:i:96 cg:Z:97M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D169M3I284M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815592:29942469-29945883 3415 3 3415 3036 3493 0 NM:i:457 ms:i:4300 AS:i:4300 nn:i:0 tp:A:S cm:i:112 s1:i:1008 de:f:0.1138 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I222M3D4M3I48M1D180M1I146M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 38606 42074 + gi|342187237:5004-8419 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815454:1200216-1203631 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815529:1421891-1425306 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M +gi|157734152:29655295-29712160 56866 38608 42069 + gi|568815569:1240288-1243708 3421 0 3421 3034 3485 0 NM:i:451 ms:i:4284 AS:i:4284 nn:i:0 tp:A:S cm:i:97 s1:i:955 de:f:0.1170 rl:i:96 cg:Z:32M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I82M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D169M3I284M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|157734152:29655295-29712160 56866 38697 42069 + gi|568815564:1286641-1289973 3333 2 3333 2959 3398 0 NM:i:439 ms:i:4172 AS:i:4172 nn:i:0 tp:A:S cm:i:98 s1:i:923 de:f:0.1165 rl:i:96 cg:Z:119M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M +gi|157734152:29655295-29712160 56866 3533 4632 + gi|528476637:29857558-29915771 58214 43020 44118 979 1103 0 NM:i:124 ms:i:1460 AS:i:1460 nn:i:0 tp:A:S cm:i:27 s1:i:217 de:f:0.1092 rl:i:96 cg:Z:156M1I416M3D62M3I27M1I156M1D277M +gi|157734152:29655295-29712160 56866 43143 44241 + gi|528476637:29857558-29915771 58214 3555 4654 977 1103 0 NM:i:126 ms:i:1448 AS:i:1448 nn:i:0 tp:A:S cm:i:31 s1:i:245 de:f:0.1110 rl:i:96 cg:Z:156M1D416M3I62M3D27M1D156M1I277M +gi|157734152:29655295-29712160 56866 43143 44241 + gi|157734152:29655295-29712160 56866 3533 4632 975 1103 0 NM:i:128 ms:i:1436 AS:i:1436 nn:i:0 tp:A:S cm:i:28 s1:i:232 de:f:0.1128 rl:i:96 cg:Z:156M1D416M3I62M3D27M1D156M1I277M +gi|157734152:29655295-29712160 56866 3533 4632 + gi|157734152:29655295-29712160 56866 43143 44241 975 1103 0 NM:i:128 ms:i:1436 AS:i:1436 nn:i:0 tp:A:S cm:i:28 s1:i:232 de:f:0.1128 rl:i:96 cg:Z:156M1I416M3D62M3I27M1I156M1D277M +gi|157734152:29655295-29712160 56866 47648 48471 + gi|528476637:29857558-29915771 58214 31581 32408 734 834 0 NM:i:100 ms:i:1064 AS:i:1064 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1114 rl:i:96 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D29M6D113M2I3M2I4M1I155M +gi|157734152:29655295-29712160 56866 31699 32530 + gi|528476637:29857558-29915771 58214 48998 49823 733 838 0 NM:i:105 ms:i:1046 AS:i:1046 nn:i:0 tp:A:S cm:i:17 s1:i:193 de:f:0.1147 rl:i:96 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I31M8I113M1D3M3D4M1D155M +gi|157734152:29655295-29712160 56866 47648 48471 + gi|157734152:29655295-29712160 56866 31699 32530 732 838 0 NM:i:106 ms:i:1044 AS:i:1044 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1138 rl:i:96 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D29M10D113M2I3M2I4M1I155M +gi|157734152:29655295-29712160 56866 31699 32530 + gi|157734152:29655295-29712160 56866 47648 48471 732 838 0 NM:i:106 ms:i:1044 AS:i:1044 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1138 rl:i:96 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I29M10I113M2D3M2D4M1D155M +gi|157734152:29655295-29712160 56866 8694 10348 + gi|528476637:29857558-29915771 58214 1488 3170 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:96 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M +gi|157734152:29655295-29712160 56866 8694 10348 + gi|157734152:29655295-29712160 56866 1466 3148 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M +gi|157734152:29655295-29712160 56866 1466 3148 + gi|528476637:29857558-29915771 58214 8615 10269 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M +gi|157734152:29655295-29712160 56866 1466 3148 + gi|157734152:29655295-29712160 56866 8694 10348 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M +gi|157734152:29655295-29712160 56866 40091 41811 + gi|528476637:29857558-29915771 58214 8615 10269 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2I12M1D32M1I131M2I6M1I268M1I4M3I11M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M29I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D41M +gi|157734152:29655295-29712160 56866 40091 41811 + gi|157734152:29655295-29712160 56866 8694 10348 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2I12M1D32M1I131M2I6M1I268M1I4M3I11M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M29I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D41M +gi|157734152:29655295-29712160 56866 8694 10348 + gi|157734152:29655295-29712160 56866 40091 41811 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2D12M1I32M1D131M2D6M1D268M1D4M3D11M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M29D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I41M +gi|157734152:29655295-29712160 56866 8694 10345 + gi|528476637:29857558-29915771 58214 39969 41686 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:96 cg:Z:11M2D12M1I32M1D131M1D1M5D6M1D202M2I69M4D9M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M27D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I38M +gi|157734152:29655295-29712160 56866 8715 10348 + gi|342187237:5004-8419 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815529:1421891-1425306 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815454:1200216-1203631 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 45590 46424 + gi|528476637:29857558-29915771 58214 30702 31514 718 856 0 NM:i:138 ms:i:944 AS:i:956 nn:i:0 tp:A:S cm:i:50 s1:i:439 de:f:0.1114 zd:i:1 rl:i:96 cg:Z:36M2I6M1D4M3D8M3I14M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I197M7D1M2D3M1I15M2I1M1I138M3I40M +gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815592:29942469-29945883 3415 1487 3157 1291 1726 0 NM:i:435 ms:i:944 AS:i:950 nn:i:0 tp:A:S cm:i:9 s1:i:103 de:f:0.2060 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M2I12M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 30823 31632 + gi|157734152:29655295-29712160 56866 45590 46426 716 858 0 NM:i:142 ms:i:934 AS:i:946 nn:i:0 tp:A:S cm:i:47 s1:i:408 de:f:0.1106 zd:i:1 rl:i:96 cg:Z:36M2D5M7D20M4I3M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D48M1D148M7I1M2I3M1D15M2D1M1D138M3D42M +gi|157734152:29655295-29712160 56866 45590 46426 + gi|157734152:29655295-29712160 56866 30823 31632 716 858 0 NM:i:142 ms:i:934 AS:i:946 nn:i:0 tp:A:S cm:i:47 s1:i:408 de:f:0.1106 zd:i:1 rl:i:96 cg:Z:36M2I5M7I20M4D3M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I48M1I148M7D1M2D3M1I15M2I1M1I138M3I42M +gi|157734152:29655295-29712160 56866 30823 31630 + gi|528476637:29857558-29915771 58214 45466 46300 713 856 0 NM:i:143 ms:i:924 AS:i:936 nn:i:0 tp:A:S cm:i:47 s1:i:312 de:f:0.1121 rl:i:96 cg:Z:36M2D5M7D20M4I3M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D48M1D148M7I1M2I3M1D15M2D1M1D138M3D40M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815551:1197321-1201446 4126 2203 3873 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|157734152:29655295-29712160 56866 54938 56608 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815564:1286641-1289973 3333 1410 3080 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 54938 56608 + gi|157734152:29655295-29712160 56866 8708 10348 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:96 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|528476637:29857558-29915771 58214 56286 57956 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 54938 56608 + gi|528476637:29857558-29915771 58214 8629 10269 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:96 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815561:1196951-1200436 3486 1561 3233 1285 1737 0 NM:i:452 ms:i:874 AS:i:880 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2107 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I78M14D4M2D2M1I48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815567:1196244-1200852 4609 2686 4356 1284 1732 0 NM:i:448 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:9 s1:i:100 de:f:0.2132 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M3D1M5D58M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M1D1M1D11M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815569:1240288-1243708 3421 1496 3168 1284 1736 0 NM:i:452 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2118 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D3M8D48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M +gi|157734152:29655295-29712160 56866 46634 47076 + gi|157734152:29655295-29712160 56866 46006 46443 427 443 0 NM:i:16 ms:i:796 AS:i:796 nn:i:0 tp:A:S cm:i:59 s1:i:350 de:f:0.0251 rl:i:96 cg:Z:405M6I20M1D11M +gi|157734152:29655295-29712160 56866 46006 46443 + gi|157734152:29655295-29712160 56866 46634 47076 427 442 0 NM:i:15 ms:i:796 AS:i:796 nn:i:0 tp:A:S cm:i:59 s1:i:350 de:f:0.0273 rl:i:96 cg:Z:405M4D21M1D11M +gi|157734152:29655295-29712160 56866 46634 47073 + gi|528476637:29857558-29915771 58214 45882 46332 428 450 0 NM:i:22 ms:i:782 AS:i:782 nn:i:0 tp:A:S cm:i:56 s1:i:327 de:f:0.0295 rl:i:96 cg:Z:393M10D38M1D8M +gi|157734152:29655295-29712160 56866 4717 5886 + gi|528476637:29857558-29915771 58214 27052 28249 926 1207 0 NM:i:281 ms:i:732 AS:i:732 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2166 rl:i:96 cg:Z:100M1I5M1D139M7D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M +gi|157734152:29655295-29712160 56866 27171 28370 + gi|157734152:29655295-29712160 56866 4717 5886 925 1208 0 NM:i:283 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2181 rl:i:96 cg:Z:100M1D5M1I139M9I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M +gi|157734152:29655295-29712160 56866 4717 5886 + gi|157734152:29655295-29712160 56866 27171 28370 925 1209 0 NM:i:284 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2174 rl:i:96 cg:Z:100M1I5M1D139M9D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M +gi|157734152:29655295-29712160 56866 27171 28370 + gi|528476637:29857558-29915771 58214 4739 5908 924 1208 0 NM:i:284 ms:i:716 AS:i:716 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2189 rl:i:96 cg:Z:100M1D5M1I139M9I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M +gi|157734152:29655295-29712160 56866 54327 54743 + gi|528476637:29857558-29915771 58214 44457 44873 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815569:1240288-1243708 3421 885 1301 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:32 s1:i:246 de:f:0.0481 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815567:1196244-1200852 4609 2075 2491 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:32 s1:i:257 de:f:0.0481 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815592:29942469-29945883 3415 891 1306 396 416 0 NM:i:20 ms:i:710 AS:i:710 nn:i:0 tp:A:S cm:i:35 s1:i:244 de:f:0.0481 rl:i:96 cg:Z:321M1I94M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815561:1196951-1200436 3486 950 1366 395 416 0 NM:i:21 ms:i:706 AS:i:706 nn:i:0 tp:A:S cm:i:29 s1:i:236 de:f:0.0505 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|528476637:29857558-29915771 58214 55675 56091 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815551:1197321-1201446 4126 1592 2008 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815564:1286641-1289973 3333 799 1215 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|157734152:29655295-29712160 56866 54327 54743 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 54327 54743 + gi|157734152:29655295-29712160 56866 44580 44996 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815529:1421891-1425306 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815454:1200216-1203631 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 44580 44996 + gi|342187237:5004-8419 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M +gi|157734152:29655295-29712160 56866 886 1289 + gi|528476637:29857558-29915771 58214 44457 44872 370 415 0 NM:i:45 ms:i:580 AS:i:580 nn:i:0 tp:A:S cm:i:16 s1:i:142 de:f:0.0842 rl:i:96 cg:Z:324M12D79M +gi|157734152:29655295-29712160 56866 46651 47139 + gi|528476637:29857558-29915771 58214 31111 31578 418 497 0 NM:i:79 ms:i:570 AS:i:573 nn:i:0 tp:A:S cm:i:18 s1:i:159 de:f:0.1011 rl:i:96 cg:Z:196M7D1M2D3M1I15M2I1M1I138M3I30M23I74M +gi|157734152:29655295-29712160 56866 44580 44995 + gi|157734152:29655295-29712160 56866 886 1289 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:11 s1:i:116 de:f:0.0891 rl:i:96 cg:Z:324M12I79M +gi|157734152:29655295-29712160 56866 886 1289 + gi|157734152:29655295-29712160 56866 44580 44995 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:11 s1:i:116 de:f:0.0891 rl:i:96 cg:Z:324M12D79M +gi|157734152:29655295-29712160 56866 31228 31696 + gi|157734152:29655295-29712160 56866 46651 47139 418 497 0 NM:i:79 ms:i:560 AS:i:560 nn:i:0 tp:A:S cm:i:16 s1:i:161 de:f:0.1068 rl:i:96 cg:Z:47M1D148M7I1M2I3M1D15M2D1M1D138M3D25M8D7M13D74M +gi|157734152:29655295-29712160 56866 46651 47139 + gi|157734152:29655295-29712160 56866 31228 31696 418 497 0 NM:i:79 ms:i:560 AS:i:560 nn:i:0 tp:A:S cm:i:16 s1:i:161 de:f:0.1068 rl:i:96 cg:Z:47M1I148M7D1M2D3M1I15M2I1M1I138M3I25M8I7M13I74M +gi|157734152:29655295-29712160 56866 44580 44995 + gi|528476637:29857558-29915771 58214 886 1289 366 415 0 NM:i:49 ms:i:556 AS:i:556 nn:i:0 tp:A:S cm:i:12 s1:i:107 de:f:0.0941 rl:i:96 cg:Z:324M12I79M +gi|157734152:29655295-29712160 56866 44580 44995 + gi|528476637:29857558-29915771 58214 39378 39792 363 418 0 NM:i:55 ms:i:508 AS:i:508 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1232 rl:i:96 cg:Z:85M3I4M3D48M1I274M +gi|157734152:29655295-29712160 56866 44580 44995 + gi|157734152:29655295-29712160 56866 39500 39914 362 418 0 NM:i:56 ms:i:502 AS:i:502 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1256 rl:i:96 cg:Z:85M3I4M3D48M1I274M +gi|157734152:29655295-29712160 56866 39500 39914 + gi|157734152:29655295-29712160 56866 44580 44995 362 418 0 NM:i:56 ms:i:502 AS:i:502 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1256 rl:i:96 cg:Z:85M3D4M3I48M1D274M +gi|157734152:29655295-29712160 56866 39500 39914 + gi|528476637:29857558-29915771 58214 44457 44872 360 418 0 NM:i:58 ms:i:490 AS:i:490 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1304 rl:i:96 cg:Z:85M3D4M3I48M1D274M +gi|157734152:29655295-29712160 56866 7021 7639 + gi|528476637:29857558-29915771 58214 49208 49824 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:96 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D8M1I4M2D25M1D11M1I5M1I2M2D4M1I4M1I7M5D7M1D133M1D49M1D29M4D5M3I3M1I53M +gi|157734152:29655295-29712160 56866 7021 7639 + gi|157734152:29655295-29712160 56866 47858 48472 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D9M1I3M2D25M1D11M1I5M1I3M1D8M1I7M3D7M1D90M1I5M1D37M1D49M1D30M4D4M3I3M1I53M +gi|157734152:29655295-29712160 56866 47858 48472 + gi|528476637:29857558-29915771 58214 7043 7661 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I9M1D3M2I25M1I11M1D5M1D3M1I8M1D7M3I7M1I90M1D5M1I37M1I49M1I30M4I4M3D3M1D53M +gi|157734152:29655295-29712160 56866 47858 48472 + gi|157734152:29655295-29712160 56866 7021 7639 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I9M1D3M2I25M1I11M1D5M1D3M1I8M1D7M3I7M1I90M1D5M1I37M1I49M1I30M4I4M3D3M1D53M +gi|157734152:29655295-29712160 56866 28499 28764 - gi|528476637:29857558-29915771 58214 29092 29357 235 265 41 NM:i:30 ms:i:350 AS:i:350 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1132 zd:i:2 rl:i:96 cg:Z:265M +gi|157734152:29655295-29712160 56866 14465 14764 - gi|528476637:29857558-29915771 58214 45149 45463 266 316 0 NM:i:50 ms:i:350 AS:i:350 nn:i:0 tp:A:S cm:i:3 s1:i:40 de:f:0.1192 rl:i:96 cg:Z:5M1I26M2D116M14D2M1D114M1I34M +gi|157734152:29655295-29712160 56866 29213 29478 - gi|528476637:29857558-29915771 58214 28378 28643 234 265 0 NM:i:31 ms:i:344 AS:i:344 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1170 zd:i:1 rl:i:96 cg:Z:265M +gi|157734152:29655295-29712160 56866 28499 28764 - gi|157734152:29655295-29712160 56866 29213 29478 233 265 40 NM:i:32 ms:i:338 AS:i:338 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1208 zd:i:2 rl:i:96 cg:Z:265M +gi|157734152:29655295-29712160 56866 29213 29478 - gi|157734152:29655295-29712160 56866 28499 28764 233 265 0 NM:i:32 ms:i:338 AS:i:338 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1208 zd:i:1 rl:i:96 cg:Z:265M +gi|157734152:29655295-29712160 56866 17792 17978 + gi|157734152:29655295-29712160 56866 17883 18067 176 186 0 NM:i:10 ms:i:312 AS:i:312 nn:i:0 tp:A:S cm:i:11 s1:i:86 de:f:0.0486 rl:i:96 cg:Z:6M2I178M +gi|157734152:29655295-29712160 56866 17883 18067 + gi|157734152:29655295-29712160 56866 17792 17978 176 186 0 NM:i:10 ms:i:312 AS:i:312 nn:i:0 tp:A:S cm:i:11 s1:i:86 de:f:0.0486 rl:i:96 cg:Z:6M2D178M +gi|157734152:29655295-29712160 56866 6285 6982 - gi|528476637:29857558-29915771 58214 6307 7004 528 727 0 NM:i:199 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2392 rl:i:96 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M8I5M1I8M1I5M1I9M1D6M1D5M1D8M8D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M +gi|157734152:29655295-29712160 56866 6285 6982 - gi|157734152:29655295-29712160 56866 6285 6982 528 723 0 NM:i:195 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2436 rl:i:96 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M1I7M2D2M2I3M2D26M2I3M2D2M2I7M1D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M +gi|157734152:29655295-29712160 56866 8039 8361 + gi|157734152:29655295-29712160 56866 8039 8285 228 323 0 NM:i:95 ms:i:262 AS:i:281 nn:i:0 tp:A:S cm:i:8 s1:i:53 de:f:0.0769 rl:i:96 cg:Z:131M77I89M1D25M +gi|157734152:29655295-29712160 56866 8039 8285 + gi|157734152:29655295-29712160 56866 8039 8361 228 323 0 NM:i:95 ms:i:262 AS:i:281 nn:i:0 tp:A:S cm:i:8 s1:i:53 de:f:0.0769 rl:i:96 cg:Z:131M77D89M1I25M +gi|157734152:29655295-29712160 56866 46497 46603 - gi|157734152:29655295-29712160 56866 46497 46603 92 106 0 NM:i:14 ms:i:128 AS:i:128 nn:i:0 tp:A:S cm:i:4 s1:i:54 de:f:0.1321 rl:i:96 cg:Z:106M +gi|157734152:29655295-29712160 56866 8206 8392 + gi|157734152:29655295-29712160 56866 8003 8199 154 201 0 NM:i:47 ms:i:116 AS:i:116 nn:i:0 tp:A:S cm:i:5 s1:i:41 de:f:0.1979 rl:i:96 cg:Z:14M3D43M2I1M1I28M1D2M2D3M1D14M1D11M2D3M2D5M2I5M3D52M +gi|157734152:29655295-29712160 56866 8003 8199 + gi|157734152:29655295-29712160 56866 8206 8392 154 201 0 NM:i:47 ms:i:116 AS:i:116 nn:i:0 tp:A:S cm:i:5 s1:i:41 de:f:0.1979 rl:i:96 cg:Z:14M3I43M2D1M1D28M1I2M2I3M1I14M1I11M2I3M2I5M2D5M3I52M +gi|157734152:29655295-29712160 56866 46537 46603 - gi|157734152:29655295-29712160 56866 46537 46603 60 66 0 NM:i:6 ms:i:96 AS:i:96 nn:i:0 tp:A:S cm:i:4 s1:i:48 de:f:0.0909 rl:i:96 cg:Z:66M
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_cutoff_05.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_cutoff_06.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_cutoff_07.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_cutoff_08.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_cutoff_09.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_log_05.txt Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +Set up cutoffs manually
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/calcuts_log_09.txt Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +Set up cutoffs manually
--- a/test-data/calcuts_out.tsv Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1 +0,0 @@ -1 0 0 1 1 100
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/get_seqs_purged_10.fa Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,16 @@ +>Test_sequece_purge_dups:1-744_1 +ATGCCAGAGCACGTGGTCCAATGCAAGTATTGACGAGACAGCCTGTAGAGGGTAGATCGAGAGACGGTGGTTTAAGATTCGGTGAGATGGAACGTGACTGTATGATTGCTCATGGTGCTGCCTCATTCTTGAAGGAGAGATTAATGGAAGCATCCGATGCCTTTAGAGTCCATATTTGTGGTATTTGCGGGCTGATGACAGTTATCGCGAAATTAAATCATAACCAATTTGAATGTAAGGGATGTGATAATAAGATTGATATTTACCAAATTCATATTCCATACGCCGCGAAGTTATTATTCCAAGAACTTATGGCTATGAACATTACACCACGTTTATATACCGATCGTTCGAGAGATTTTTAAGAAATAATGTTGTAACTCTAAGAAAGTAAAATAATAAAAAACATTTCATTTGTGCTGATCTTGCCAAAAAAAGGGTAAACAAGTAGGCAATAGTAATAAAATAAGAATGAAGCATTTCTTTTAATAAGCAGAGAGAACTTTCAAGCATTCAAAAAACACAAAAATAATGATGAATAAAATGGGACTCACAGTGTTTATTTATAGTCCTTGTTTCGCATTTTACCAAATTAAAATTTAATTTTATCAAGACATATTAATGAACTTTAGCGGAAAACCTTAAATATCCAAGTCATAAATAATGACTTATGTAAAAAGTTATAAGAAAAATATACGGTGTTCATTTTGGAACAATGTTGCTGTTACACACTGTTAAATATAT +>Test_sequece_purge_dups:746-1078_1 +TAGTATTCATAAAAGAAAGAAGATTTTAATACGCGTTTTGATTAAAACTACATAACAGATAAATATATACATGGATTGAAGACTGCAAAAAGGATATATAAAAAAATGACAAATAATTTCAATAAGCTATTTCAATTGGTTAAAAATTGATTCTTTAAGAGGCTCTGGTATTGATGATTGCTCATGGGCAAAGGCAGTAATATTTTGTTTATAAGGGTTTTCACTTCCATCGAAAACTTTTAAGCGGTCTAACCGTTGCTTTCTCAATTTATTTTTAGGCAACATACCGCTAACTGCTTTTTTCAAAATTTCTCCAAATCCTTTATCGGCAAC +>Test_sequece_purge_dups:1080-1985_1 +ACCTTGTTCATTGTCTGTAACTTTAGCTGACCAGGTCTACCTGAATGAGACCAGTAAGTCTTCTGCTCAAATTTCTTACCTGTTACACGGATTTTTTGGCAATTAGTCACTACTACGTAGTCTCCACAGTCTTGTGACGGATGATAGACCGGCTTATGTCTACCAATTAAGGTAATTGCAATTGCTGAAGCCAATCTACCCAATGTCCTCTTATCACGGGCAACGTCGACATGGTGCCAAAGGCGCGCAAAAGCCAAGCCACTGTGTCCAATCTTCTGCGACATGAATAGGCTATTGTTGATGCTGGTATTGCTTTCTTTTTCTATATGATATCAGTGTATTCATAAGGTCTTTCTCTTTTACTTATTTAGAACGTTTTAAAGATCTCTAAACTACAAGGAAGGCTCCATGCGGGTAACAATCAACATTATAACGATAATTAACTAAACCATAACCGTCTAAGTAACCATAGCGTGCGGTGATTCTTCGCTAGATGGAACTCATGTCTTACTAGTAGCGTGTTTGGTACGTGCAATATAGAGCAAAACATTATATAGACATCGTAATAGCTTTTTATGTGCGGACTGTAATGTTTGTAAGAAGTAAAACCAGTCACTAATATAGTGAAAAAAAGTCAACTTATCGATCTATGTATCTCATAGAAGATGTATTGATTTAATATAACTTATAAAGGTGCTTCTACAGTAAGGTGCTGAGAGGACTTACTATGTCGGCAACAAGTTCAAATCTGAAGCTCTGAGGATTTCGCGAGATGCGCACAATCTGAAGTAATATAAAGATGAAAACACAATACAAAAGGCCTGAAAATCTATATGTCCGATAAGATATCATAGTATTCTTACTCGCAAGCACACATCAGGTACTTGGAAGTGTATGATGAGGTAT +>Test_sequece_purge_dups:1987-3249_1 +AATGGTGGCTTTATTTAGTATATGCCATCGGCCTAATGCTATGCCTAGGCCCGTCGTATATTCATCCAGATGAACATTTCCAATGCATCGAGATTTTGGCTATGCAGTTCATGAAGGTCAAAGGTACCATCCCATGGGAATTTAAATCAAAATTTGCTGCTAGGAGTTACGGCCCCCTATTATTGGTTTACGGGCCTTTGTTCACTATTTTAGAATCTTTTCCCCGAAATTCAGGACAACCCAGCGTTAATTCTGTATTCGATGAGACTACAAAACTATGTGATGTACCTATTGTGCTATCATTTTTTAATACCTAAATTAATAAGGGATGAGAGAAAGGCCGTACAATTCATCAAAAAAAGTCTACTTTTAACTTCTTACGTAACCTGGACGTACCAAACACACACGTTTTCCAATTCCATAGAAACGCTGGCTTTAATCTCAACTTTAACTGTAATGGAAGATATGGTAAACGAAAAAAATATTCAAAGAAGTAATTTCAAAAATTCGGTTATATTGGGACTTATATTTAGTTTTGGTGTTTTTAATAGAGTTACTTTTCCTGCATTTATTTTCTTACCATGTTTGATATTATTCTGGAAGTTTTACCGGGTCCATTGGAAATCCTTTTCTTTACTTTTACTTTCATTTTCATTTTCCTCGTGTCTATTTGTTCTTATTGATACAAATATTTATAACAACGGAAAGGGATTTGTCATTACGCCCTTGAATAACCTGAAATACAACCTCAATGTCCAAAATTTGCAAGTACATGGATTACATCCAAGATACACCCATCTGCTGGTCAATTTACCTCAAATAGTTGGCCCAGTATTGCTGCTAGCGATTTTTTCCGGTTACAAACTCGATAAATTATCTACTTACGCAATCATATCTGGCCTGCTTTTTCTTTCATTCTTTCAACATCAAGAATTAAGATTCCTTGTACCGCTAGTGCCACTACTCGTGACAAACTTAAACTGGACACCTCTGAGTTCCACGTTAGTAAACAAGAAAATTTTCAAGGGAACTTGGCTTCTTTTTAACATAATCATGGCGTTCATCATGGGAATTTCACATCAAGCAGGAATTATCCAATTTTTGGGAGATTACTTCCACTTTCGTACCGAACAAATGGGCGTTCACATATGGTGGAAAACATACTCACCACCCACCTGGATGTATATGAGCAATAACCTAACCGTTTCTTCTCTTATCAATACACAGGATGGTATTGAGTCGATAGATGAAGTGGCATTCAGT +>Test_sequece_purge_dups:3251-5412_1 +TAGGTAACCATCATGTAATAGACCTTAAAGGCTGTGATTTACCACTTTTAACAGAAACAATTAGGCGGCTGCGTTTAAACGGGTCCATAACTCCACTAACTTTAGTAACTCCCAATTCCATGACATCAGAATTGAAAAAGTTGAAGAGAGATGGCACTATTAACTTAATACCCAAAAGAAATTACTTGTTCCATTTGGATTTGGATCATCTTGATTTCAATGATTTCACGACTTTTAAGCCAGGGCTAACAGTGTACTCCATCGAACTACTATAAGACCAGCTATATGAGGAGTTATGCATATATTATGGCTGTGAATTTAAGTTTAAATGATCTTATCCTAGGTATTCTTATAAAAAAGAAGAGTGCTTTAATCGAGCAATGGTTAACTATTTGTTGCATACTCATTTTTTCCCATTGAAATCTCTAATTGTAGGCTGATACAAACTCGGTACTCAGCTCAAGATAGGATTGTTAGTTCTGATATGCAATCTTATTAATCTATGTATAGTACACAACTGTATGAAAACCTCCCGAAGTCTAAGTAAAGCTCCATTGATGTTCTCTTGCTGTTAAGTATTATATTACTCCATAACCAAATCTGTGTTCACACGTACTACAAGCTTGACATGATACTGACCATAGTACATGTGCAAGTTATTCAAACTAAGAATTACAGAGCTTCATTTGTCACAGTCACTTCATACTACTATGCTTCTAATGCTTCTAATATTTATGCATTGCAGGTTCAACATGCAACACTTGGGTTCTCAATGATCTGGCGCTATCATTTGTTACCCGACCGTGCGTAGAAAAAAATGTAAAAATATAGGAATAGCTGTTTTAAGTTATTAAGGTAATAATGCACGTCGAGCGATGGTAGGTAAAATGTCTAGAGGCATATCTAGGATGTAGAATGAGCAAGTTTTCACTTAAGTTGGGGAGTAAGACCTTGAAAAAAAATATTTCCAAGAAGACGAAAAAAAAAAACTCATTACAGAAGGCCAACTTATTCGATTGGGATGATGCGGAAACTGCAAGCCTTTCGCATAAACCTCAAAGTAAGATAAAGATTCAAAGTATTGATAAATTCGATCTTGATGAAGAATCATCTTCTAAGAAGAAATTAGTGATCAAGCTGAGTGAAAATGCGGATACCAAAAAAAACGATGCTCCTCTGGTGGAATATGTCACCGAAAAAGAATATAATGAGGTACCTGTCGAGGAATTTGGAGATGCTTTACTTCGGGGTATGGGGTGGGAAAGTGACTCCGAGCAAGATTCTAAAGGCGACAAGACACAGAGTCGAAACAAGGACGTTTCAAATGTTTCACAGATACATCCTGATGGACTGGGAATTGGTGCCAAGTTAAATAAGGCAATAAACGTGGAGGAGGCTTCATTTATGCCCGTCGTAAAAATCGATAAAATAACGGGCACTAAAGTTGATGACGACAAAAAAAATAAGTCATGAGAAAGTTTGAATATATAATTTAAAGTACTTGGTATATACACATTATATTTTATGCATGTTCCGAAGGAGGTATTTTTAGTTTGGCTTTTTTTTCTTATTTTTTCTTCAATTTACTTGATAAATGAAATGCAAGGAAGTTCAGTTTGATATTATATAAGCAATAGTCAAACCATGGCACCAAACCCAAACAACAATAATTGGGATGCAAAGGTAGTACCCCATTGTTTCATCCAATCATTTTTGTTTTTAAACTCCCAATCTTCTACTATTTTGGTTAAATCAACATATAGCTCCATGGTAATTTGGTCTAGTATTTGATTAATGTTAATAAGCTGTAAATCTGACAAGTTTTTGACCATCTTACAGCGTAAAACAATTTCGTTTGCATTAGTATTTGGTTGATTATGAAACTTGATGATTTCCTTCGTGGAATTGGAAGTGACTTTTGTAGTTAAAGGATAAGATTTCCTTTGCCTATTAATCGATACATTTGGCGAGTTCCAGATTATGGAATTGGTCAATCTCTCGTTTTCCGAGAAATCTTTCAATATAGGATTAGCCATCCCTTCATATGAGTTAATAAATGTTATTATAGGTTTCAATTCATCCAATGAAACAATACTGTCACCTGTCGATAATACTGGAGGTTCCTGAGGGAAAGTTGTCTTCAAGTCCCTACAAGTTACCTT +>Test_sequece_purge_dups:5414-7266_1 +AAATCCACCACTGCATATTTCGACTCCGATGATAGATGAGAAGTAGAATTTGTTAGCATTATGTCAGCAAGTATTTCAACTTGGCCGTCTTTCAACCAGTTGAACTTACCATCGCCATTAAATTTTAAATCATTAATGTTGATAAAGTTCAATCTTAACGTCGTTACATAATTCGGATCATCCTGATGAGTCACTGTGCGGTAATTTTCCTGATTGTTGTCCGTGAAATCAAACTTCGAGCTTGCCATCCTATTTTTGTTATTATTTTCAATAACTGCTGTTAACTTTTGTTGCCTCTTAAATAAGTTGAAAAGAGAATTATTAATTGAACCAGAAAATGTTTTGGCACTCAGAATATCAGAAATAAAATGGTTCAGTCTTAGTCGTGGTAAAGATAGATTGTAAATGGAAAATTTTAGACTCGGAGTTTCCTGGGCACTCAGAGATTGTTTCAAAAGAATTTCTGAGTCAGTAATTTCAACGTTATTTAAAGTTTTCAAAAAATTCTCCGTCTTTTGATCTCCTTGAAAAGAGTTTACTAAATTGATGAAATTGGATAAGTTCAAACATCCTCTAATACCGTATATTGAAACATTTGTAATTAGTCCCCTGCCAAGTAACCAATTTTTTAGGGAAACATTCAGGTTAATGTGGTGAAATTTTAAGTCTAAGTCCAAAATCTCATCCCTGACATTTAGCCTTTTTATAAGTATTGAATTTGACTCCCAGTCTGGAGAGAGCACAAGCATTGATGCTTTATCTTCCGGAGAAAATGTGATTTCCAAATCTTGATTGGAGCACTTATGATCTTTCAACAACCATTTTAGAAGCCTTTCATAGATTTTCTTCTCATGGATGTATTCCTGACTGAAAACAGAGTTAATGACGAATAGATAGAACGAAATGAAAGTGGTGGTGCTCAGAATGAGCCATAGAATTTGTGACAATATCAGCCAAGACGCTATAATACTTATTTCATTCAGAGAGAACGGCCTGTTGTTTTTAATAAGAATCCACTTTAGATTGATTTTGAACCTTTCTTGAAAATTCTTTGCATCTGCTAGAAGCGATTGCTTGAACTCTCGCTCATTATTTTTTCTCAGCAAAATAGTCTCAATATTGGAAGCCTTGGTAGTGAACTTGTCATTGCTTGGAAATGTTCGGATGTGCCTTTGGGCGATCAAACATCTAACAGGTAACGAACTCTTGTAAGGTGTTATAAAAGGTCTGACATTTCCATGATTAGTTGCGACGTAAGTTCGAATACAGTGTCTTACGAGATGACTTGTAATTGGAAGCAGTGGCCGCTTTATTGTAGGGACCCGTAAACGTGTGATTAGCATGAATTTTATAAACCTCCCACCACCTGATAATCTGTATGTGCCTTTTGTTTTAATACTTCTTGACGCAAATCTACTGTCAACTTTAATATGCATCCCTCCATAGTAAGTCAAGGATCAGCTAGAACCAATAACGAGAAGTAAAAAAAAGTGACAAAAAGTCAAATGTGTCTTTATACGAATTTTTTAACCTACATATGAAGAGTAAGGTCATAAATAATAAATGTAGGGCTAAATGCAGTTAAGATTACTACAGTATTAGGTCTGTTTTTTATCACCTCTTACGGAAAGTGCGAGCGGGAAAAAATTTTTCTTCTTTCCTTATTATCATACCGATGCTCATCACAATGAAAGATACATATTGCATCAATAATAGGCAGTTTTCAATATTCTTCTGTTTAGTTAAGAAAAAGACTTGAAGTGAAAATAAACTACATTATGGTTGCGCCTACTGCTTTGAAAAAGGCTACTGTGACACCTGTAAGTGGACAAGATGGGGGCAGTAGTAGAATT +>Test_sequece_purge_dups:7268-9120_1 +TAGGAATAAATAATACCGAAAGCATCGATGAGGACGATGATGACGACGTTCTGTTAGATGATTCCGACAATAACACAGCAAAAGAAGAGGTAGAGGGCGAAGAAGGTAGCCGGAAAACGCACGAATCTAAGACCGTAGTGGTTGATGACCAGGGGAAACCTCGCTTCACTTCAGCTAGCAAAACACAGGGTAACAAAATAAAATTTGAATCGAGAAAGATCATGGTTCCACCACACAGAATGACACCCTTGAGGAACAGTTGGACAAAAATTTATCCTCCTTTGGTCGAGCACTTGAAGCTGCAAGTCAGAATGAATTTAAAGACCAAATCCGTAGAACTAAGAACGAATCCTAAATTTACCACAGACCCTGGTGCGTTGCAAAAAGGGGCCGATTTTATCAAAGCCTTTACCTTAGGGTTTGATCTTGACGATTCTATCGCACTATTGAGGCTAGATGATTTATATATTGAGACTTTTGAAGTCAAAGATGTCAAGACTCTAACAGGTGACCATTTGTCGAGAGCCATCGGTCGTATTGCCGGTAAAGACGGTAAAACGAAATTTGCGATTGAAAACGCTACAAGAACAAGAATTGTCTTAGCTGACTCTAAAATCCACATTTTGGGCGGGTTCACCCACATCAGAATGGCAAGAGAATCTGTGGTTAGTTTAATTTTGGGTTCCCCTCCAGGTAAAGTTTATGGGAACTTACGTACCGTTGCATCTAGATTAAAAGAACGCTACTAAACATAATTTGTGGGCTTTCATCATCTGTATAATATTTATATGTCGTTTTATGGCGAAATAGAGTGAATAAATAGGTTTTTTTTTCCTTCTTTTTTTTAGGACGCCAAACGCGTAACGTTAGCGGTGATAAATTAGTTTAGTATTATTATCCGGCTATTTGCTTCATGTATTTAACGTCTTCACTGACCACCTTCGCTGCACTAAATCGTATGGTACCATAGCATTAATCTTTTTGAATCAGAGAAGGTTTTCCAATGAAAAGGCACGTGTCTTTATCTGATATATTGACAGGAAATAAGAGAAAAGTGAGAAGACAAGATGCTCTACAGATTACCATCGATGACGAAAATGATACTGAATCAGGCACTTTTGACGCCAGAACAGCCAAACATGACGATTCTTCAGTAATATTTTTAAACCACTCTGTTGTGAAGCCAATTGAAGCTGTTTCTACTAATCACAAATCTGCAAAGGAGTTTTTGATGACGAAACGCACAAAAGAAAAATGCGATGACGACGATGATGATCTTATTGTAATCAGTGATAAGAGTCCCAAAAGTGAGACTAATTGTAGCAAAATTGCACTTTCGCAGGAGCATGAAGATGATATTTCTATAATTTCCACATCGAGAATCAAATCATCGCTTCTTAATGAAAGAGCATCAAAGATTAAAAACTTCCTTAAACATGAGACAACCGACACGTTCAAAAGATTAAATAGCATCTCTAAACTAAATGAAATAGAGCCACCATTACCATTACATCAATCGATTTTCCCAGTAGGTGACAAAGAGCTGTCAGATCGGAGTGTTGATATCCCGCTTCCTTTCCGCACAATACCGCCATTAAATCATAATTTTCTTCCTAGTGACTATGAATCGTTGAAAGACAAGAATTCAGCATCTTGTATTCCTGTTCGCTATCAAGCACCGGTATTACTTGGCACAAATATTAAAAGAAATACAACTCTCACATGGCCGCAGCTATTCAAGCCTGTCACTTTAAAACAAGTATTAATTGAACCCAAATTGAAACTTCGAATCAAAAATTGGATTGAAACATCCTTTCATACGCTAGAAAAGCCTACCTTGAGGAACCGTCTAT +>Test_sequece_purge_dups:9122-10180_1 +GAACAGAATAAATCCCAATAAACAACAGGGATCTGGTGATGAGCTTGCCAACTTCATTGTACCTGATCTCGAAGAAGACGAAAACTTGCGTCCAGATTTCTACAGAAATGGCGAAGCAAATAGCAGCTTGAGCGAATTTGTTCCACTAATGATATTACACGGAAATTCAATAGGCAAGAAAACGCTGATACAGACAATCATGAGAGAGATTGCTGGCGACGATAATTCTTACCAGATATATGAAGTTAATTCAAACATGAACAGGAGCAAAAAAGATTTGCTTGATATCCTACTAGATTTTACCACCACACACTATGTCAAAGATTCCTCAAAAAGGAAAAGTGACTACGGGCTTGTTTTATTTAATGATGTTGATGTTTTATTTAAAGAACATGATAGGGGATATTGGGCAATGATCAGCAAGCTTTGTGAATTTTCACGAAGGCCCCTCGTATTGACTTGTAAGGATTTGTCACTAGTTCCTAGTGAACTTATTGCCTTGGCAAGTGAACAAAACTCTTTGTTTCATACTAAGAAAATTAGTACATCCACAGTCTATGCGTTTCTAACAAAATATTTAAAGTCCCTTGAAATCGAAGTTTGTGACGACTGGCTTCGCGATGTTGTAAAACAAAATAATGCGGATATTAGGAAGTGCTTGATGCACTTGCAGTTTTGGTGCGTTGATACTGGGGCTGATTTGATTTCATCCAAGAACAGACTACCGGTCCTAACATCAACTCTTGGTTCAAGCGTTAAAGATATATCGCAATTAACTGATCTACTCTCCATAAATGATGTTATTGGTCAAGCAACGCTCAATCGTTCCATGGTTAGACAAGAAATAGATTCTACCACAATGACCCCAGAAAAAGTTAATACTTTCCAGGATCAAAATCTGGATGATGAAATGAAATTAAAATTTGATTACGTGATAGATTATAAATTGCATTTAAATGACCCCAATAGACAACCATTATTACCCTTTGAATTGAATATTTACCAACACATCCAAGAACAATTGGAAGCTCGGTATTCCTATGTTAGAGAAGCAAACCA
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ngsc_cov_08.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,336 @@ +>>chrM 0 +1 0 0 +>GTATTCTTACTCCATAAACACATAGGCTTGGTCCTAGCCTTTTTATTAGT 0 +1 0 0 +>CTAAATCACGTCTCTACGATTAAAAGGAGCAGGTATCAAGCACACTAGAA 0 +1 0 0 +>ATAAAAATTAAGCTATGAACGAAAGTTCGACTAAGTCATATTAAATAAGG 0 +1 0 0 +>ATAAATCTCCGGCGTAAAGCGTGTCAAAGACTAATACCAAAATAAAGTTA 0 +1 0 0 +>AAGTGACTTTAATACCTCTGACTACACGATAGCTAAGACCCAAACTGGGA 0 +1 0 0 +>AAGCTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTT 0 +1 0 0 +>CCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT 0 +1 0 0 +>AACGTTAGGTCAAGGTGTAGCCCATGGGATGGAGAGAAATGGGCTACATT 0 +1 0 0 +>TGGAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGAGAGCTTAATT 0 +1 0 0 +>CACAAATCATAACATAACATAAAACCGTGACCCAAACATATGAAAGGAGA 0 +1 0 0 +>TGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATTTCACTCAAAA 0 +1 0 0 +>TTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAG 0 +1 0 0 +>ATGCATTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT 0 +1 0 0 +>CGAAACCAGACGAGCTACCTATGAACAGTTACAAATGAACCAACTCATCT 0 +1 0 0 +>AGCCTGGTGATAGCTGGTTGTCCAGAAACAGAATTTCAGTTCAAATTTAA 0 +1 0 0 +>AAAGGTACAGCTTTTTAGATACAGGTTACAACCTTCATTAGAGAGTAAGA 0 +1 0 0 +>TTCAAGCTCAACGACACATCTATCTTAATCCCAACAATCAACCCAAACTA 0 +1 0 0 +>TTAATATGAGTAACAAGAATTATTTCTCCTTGCATAAGCTTATATCAGAA 0 +1 0 0 +>TCATCTATTTAAACCATTGTTAACCCAACACAGGCATGCATCTATAAGGA 0 +1 0 0 +>ACCAAAAACATCACCTCTAGCATTTCCAGTATTAGAGGCACTGCCTGCCC 0 +1 0 0 +>taatcacttgttccctaaatagggacttgtatgaatggccacacgagggt 0 +1 0 0 +>cgggaatgactaaataagacgagaagaccctatggagcttTAATTAACTG 0 +1 0 0 +>TTGATTGAATCAGCAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAAC 0 +1 0 0 +>TTGATCCAAACCATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCG 0 +1 0 0 +>TTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTTTGTT 0 +1 0 0 +>CGGTTTCTATCTATTCTATACTTTTCCCAGTACGAAAGGACAAGAAAAGT 0 +1 0 0 +>AATCTAACTAATTTATAACTTCTACCGCCCTAGAACAGGGCTCgttaggg 0 +1 0 0 +>caactcctctccctaacaacaTGTTCATAATTAACGTCCTCCTCCTAATT 0 +1 0 0 +>CTTAGGCTATATGCAACTTCGCAAAGGACCCAACATCGTAGGCCCCTATG 0 +1 0 0 +>CTACAACCACTAACATCATCGACATCCATATTCATCATCGCACCAATCCT 0 +1 0 0 +>CACTAATCAACATAAACCTAGGAATTCTATTCATACTAGCCATGTCCAGC 0 +1 0 0 +>CGCCCTAATTGGAGCTCTACGAGCAGTAGCACAAACCATCTCATACGAAG 0 +1 0 0 +>ACATTATCAACACTTATTATTACCCAAGAATACCTCTGATTAATCTTCCC 0 +1 0 0 +>ACCGAGCTCCATTTGACCTAACAGAAGGAGAATCAGAACTCGTCTCTGGA 0 +1 0 0 +>ATACGCAAACATCATCATGATAAACATCTTCACAACAACCCTATTTCTAG 0 +1 0 0 +>ATTAAAGCTCTCCTTCTAACATGTTCCTTCCTATGAATCCGAGCATCCTA 0 +1 0 0 +>TACCACTCACACTAGCCCTCTGCATATGACACGTCTCACTTCCAATCATA 0 +1 0 0 +>ACTTTGATAGAGTAAAACATAGAGGCTCAAACCCTCTTATTTctagaact 0 +1 0 0 +>ttacaccatgtcctaCAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCAT 0 +1 0 0 +>CTTCACAACTATTCTAATAACAGTTCTTCTAGGAACTATAATCGTTATAA 0 +1 0 0 +>GCCATTATCCCTATCCTAATAAAAAAGTACAATCCCCGAACCATAGAAGC 0 +1 0 0 +>TAGCGATCATCATTAACCTCATACACTCAGGCCAATGAACAATCACAAAA 0 +1 0 0 +>ACTTGGACTCACACCATTCCACTTCTGAGTACCCGAAGTCACACAGGGCA 0 +1 0 0 +>ATATCAATCCTATATCAAATCTCACCCTCAATTAACCTAAATATCTTATT 0 +1 0 0 +>AAACCCAACTACGAAAAATCATAGCATACTCGTCAATCGCGCATATAGGA 0 +1 0 0 +>ATTAATTTACATTATAATAACACTCACAATATTCATACTATTTATCCACA 0 +1 0 0 +>CTAACCACTACACTAATCTTAATTACCTTACTATCCATAGGAGGCCTCCC 0 +1 0 0 +>AAAATAGCAGCATCATCCTCCCCACACTAATAGCCATTATAGCACTACTC 0 +1 0 0 +>CCCATCCACAAACAACATAAAAATAAAATGACAATTCGAAACCAAACGAA 0 +1 0 0 +>ACCCCCATACTATCAATTTTGGACTAGGAATTTAGGTTAACATCCCAGAC 0 +1 0 0 +>TAAGGACTGCGAGACTCTATCTCACATCAATTGAACGCAAATCAAACTCT 0 +1 0 0 +>TTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCC 0 +1 0 0 +>TCCTTTGAATTTGCAATTCAATGTGAAAATTCACCACGGGACTTGATAAG 0 +1 0 0 +>CCATCTTACCTATGTTCATCAACCGCTGACTATTTTCAACTAACCACAAA 0 +1 0 0 +>AACTGCCCTAAGCCTCCTAATCCGTGCTGAATTAGGCCAACCTGGGACCC 0 +1 0 0 +>GTAATAATTTTCTTTATGGTCATACCCATTATAATCGGAGGATTCGGAAA 0 +1 0 0 +>TAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTCTC 0 +1 0 0 +>TCCTCTAGCTGGAAATCTGGCGCATGCAGGAGCCTCTGTTGACTTAACCA 0 +1 0 0 +>TTTATTACCACAATCATTAACATAAAACCACCAGCCCTATCCCAATATCA 0 +1 0 0 +>TAGCCCTCCCGGTCCTAGCAGCAGGCATTACCATGCTTCTCACAGACCGT 0 +1 0 0 +>TTATCAACACCTATTCTGATTCTTCGGACACCCCGAAGTCTATATTCTTA 0 +1 0 0 +>AAAAAGGAACCTTTTGGCTACATGGGTATAGTGTGAGCTATAATATCCAT 0 +1 0 0 +>TAGACGTTGACACACGAGCATACTTCACATCAGCTACCATAATCATCGCT 0 +1 0 0 +>AAATATCAAATGATCTCCAGCTATACTCTGAGCTCTAGGCTTCATCTTCT 0 +1 0 0 +>GATATTGTTCTCCACGATACTTATTATGTAGTAGCACATTTCCATTATGT 0 +1 0 0 +>TCCCTCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCAC 0 +1 0 0 +>CCTTGGCCTCTCAGGAATGCCACGACGCTATTCTGATTATCCAGACGCAT 0 +1 0 0 +>GCAGTGATACTAATAATTTTCATAATTTGAGAAGCGTTCGCATCCAAACG 0 +1 0 0 +>GATGCCCCCCACCATACCACACATTTGAAGAACCCACCTACGTAAACCTA 0 +1 0 0 +>tcataaccactatgtctttctcCATCAATTGAGGTATTAGTAAAAATTAC 0 +1 0 0 +>GCCTACCCCTTCCAACTAGGATTCCAAGACGCAACATCCCCTATTATAGA 0 +1 0 0 +>GCTCTCTAGTATTATATATTATCTCATCAATACTAACAACTAAATTAACC 0 +1 0 0 +>ACCAGCCATCATCCTTATTCTAATCGCCCTCCCATCCCTACGAATTCTAT 0 +1 0 0 +>CACCAATGATACTGAAGCTACGAGTATACCGATTACGAAGACTTGACCTT 0 +1 0 0 +>TTCTAGAAGTCGACAATCGAGTGGTTCTCCCCATAGAAATAACCATCCGA 0 +1 0 0 +>AGGCCTAAAAACAGACGCTATCCCTGGGCGCCTAAATCAGACAACTCTCG 0 +1 0 0 +>TCAAACCACAGCTTTATACCAATTGTCCTTGAACTAGTTCCACTGAAACA 0 +1 0 0 +>TAGCATTAACCTTTTAAGTTAAAGATTGAGGGTTCAACCCCCTCCCTAGT 0 +1 0 0 +>AATCCTAACTCTATTTATTGTATTTCAACTAAAAATCTCAAAGCACTCCT 0 +1 0 0 +>CCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCA 0 +1 0 0 +>CCTATTCCCCTCACCCAACCGACTAATCAACAATCGCCTAATCTCAATTC 0 +1 0 0 +>AGCAAAGGACAAACCTGAACTCTTATACTCATATCACTGATCCTATTCAT 0 +1 0 0 +>CACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGGGCAGGGACA 0 +1 0 0 +>ACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGA 0 +1 0 0 +>AACATTACCGCCGGACACCTCCTAATACACCTCATCGGAGGGGCAACACT 0 +1 0 0 +>TAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAATCCAAGCCTAC 0 +1 0 0 +>CACCAAACCCACGCTTACCACATAGTAAACCCCAGCCCATGACCACTTAC 0 +1 0 0 +>ACTTTAACTCAACCTTACTTCTAGCTATAGGGCTATTAACTAACATCCTT 0 +1 0 0 +>CCATCACACATCAATCGTTCAAAAGGGACTCCGATATGGCATAATCCTTT 0 +1 0 0 +>CACTCAAGCCTAGCCCCCACACCCGAACTAGGCGGCTGCTGACCACCCAC 0 +1 0 0 +>TGCTCCTAGCATCTGGAGTCTCTATCACCTGAGCCCACCATAGCCTAATA 0 +1 0 0 +>AGGCGTATACTTCACCCTTCTCCAAGCCTCAGAATACTATGAAGCCTCAT 0 +1 0 0 +>TTCCACGGACTACACGTAATTATCGGATCTACCTTCCTCATTGTATGTTT 0 +1 0 0 +>AAGCAGCCGCTTGATACTGACACTTCGTCGACGTAGTCTGACTATTCTTG 0 +1 0 0 +>CAATTGACTTCCAATCAATCAGCTTCGGTATAACCCGAAAAAGAATAATA 0 +1 0 0 +>ACTCATCGCATTCTGACTACCACAACTAAACATCTATGCAGAAAAAACCA 0 +1 0 0 +>TCAATAAAATTTTTCTTAGTGGCCATTACATTTCTGCTATTCGACTTAGA 0 +1 0 0 +>ACACTATACTTATCATAGCACTAGTCCTAATCTCTCTTCTAGCCATCAGC 0 +1 0 0 +>TTAGTTTAAACCAAAACAAATGATTTCGACTCATTAAACTATGATTAACT 0 +1 0 0 +>ACAGTATCCCTCGTAGGCCTACTAATGTACCGATCCCACCTAATATCCTC 0 +1 0 0 +>TAATAGTCCTAAACACCCACTTCACACTAGCTAGTATAATACCTATCATC 0 +1 0 0 +>CATAGTCTCCAATACTTATGGAGTAGACCACGTACAAAACCTTAACCTCC 0 +1 0 0 +>GACTATCAAAAAAGAATATAATCTGAATCAACACTACAACCTATAGTCTA 0 +1 0 0 +>CCTAAACTTCTCACTAATATTCTTCTCCGATCCCCTATCAGCCCCACTTC 0 +1 0 0 +>CATCTATCTAAGGAACCACTAATCCGAAAAAAACTCTACATCACCATGCT 0 +1 0 0 +>TCTCCTTCTACATCCTATTTGAAGCCACATTAGTTCCAACACTAATTATC 0 +1 0 0 +>CCTATTCTACACACTAATAGGTTCCCTCCCACTCTTAGTTGCACTAATCT 0 +1 0 0 +>AACCAAGCACTACCCGACTCTTGATCCAATATTTTCCTATGACTAGCATG 0 +1 0 0 +>TCCCAAAAGCCCATGTAGAAGCCCCAATTGCCGGATCCATAGTGCTAGCA 0 +1 0 0 +>ACTAAACCCCCAAACTAGCTTTATAGCCTACCCCTTCCTCATACTATCCC 0 +1 0 0 +>AAATCACTTATTGCATACTCCTCTGTCAGCCACATAGCCCTAGTAATCGT 0 +1 0 0 +>TAATCGCTCACGGCCTTACATCATCAATACTATTCTGCCTGGCAAACTCA 0 +1 0 0 +>AACACTTCTTCCCCTTATAGCAGCCTGATGACTATTAGCCAGCCTAACCA 0 +1 0 0 +>ATATCATCATTCTCATGATCAAATATTACCATTATCCTAATAGGAGCCAA 0 +1 0 0 +>GAGGGAAATACACACACCATATCAACAGCATTAAACCTTCATTTACACGA 0 +1 0 0 +>TAACCCTAAAATTATCCTAGGCTTTACGTACTGTAAATATAGTTTAACAA 0 +1 0 0 +>CGAGAAAGTATGCAAGAACTGCTAATTCATGCCCCCATGTCCAACAAACA 0 +1 0 0 +>CCAAAAAATTGGTGCAACTCCAAATAAAAGTAATCAACATGTTCTCCTCC 0 +1 0 0 +>CTTCAATACCTACAAAAACAGCACGTTCCCGCATCATGTAAAAAACACTA 0 +1 0 0 +>TCTGGACAAGAAACAATTATCTCAAACTGACACTGAATAACCATACAAAC 0 +1 0 0 +>TACCAGTAGCCCTATTCGTAACATGATCTATTATGGAATTCTCCCTATGA 0 +1 0 0 +>ATTCCTCATCACTATAATAATTCTAGTCACAGCTAACAACCTTTTCCAAC 0 +1 0 0 +>TGATGATACGGCCGAACAGATGCCAACACCGCGGCCCTTCAAGCAATCCT 0 +1 0 0 +>TATTCAACACCAACACATGAGACCTCCAACAAATCTTCATACTCGACCCC 0 +1 0 0 +>ATCCGCTCAATTTGGACTCCACCCATGACTTCCTTCAGCCATAGAGGGCC 0 +1 0 0 +>GTCTTCCTGCTAATCCGCTTCCATCCACTAATAGAAAACAACAAAACAAT 0 +1 0 0 +>TCTGCGCACTCACTCAAAACGATATCAAAAAAATCATTGCTTTCTCCACC 0 +1 0 0 +>CCTAGCATTCCTCCACATTTGCACTCACGCATTCTTCAAAGCTATACTAT 0 +1 0 0 +>CGAAAAATAGGCGGACTATTTAATGCAATACCCTTCACCACCACATCTCT 0 +1 0 0 +>ACTCCAAAGACCTCATCATCGAAACCGCCAACACATCGTACACCAACGCC 0 +1 0 0 +>TACCCGAATCATCTTCTTTGCACTCCTAGGGCAACCCCGCTTCCTCCCTC 0 +1 0 0 +>CTCTTAATTGGCAGCATTTTTGCCGGATTCTTCATCTCCAACAATATCTA 0 +1 0 0 +>CCCTCGCAGTAACCATCCTAGGATTTACACTAGCCCTAGAACTAAGCTTG 0 +1 0 0 +>CAACCTCCTAGGATACTACCCAACAATTATACACCGACTCCCACCGCTCG 0 +1 0 0 +>TGACTAGAAAACATCCTGCCAAAATCTATCTCCCAGTTCCAAATAAAAAC 0 +1 0 0 +>CATTCCTCATCACCCTTACCCTAAGCATACTACTTTTTAATCTCCACGAG 0 +1 0 0 +>ATCACAACCCAAGCCCCATAACTATACAATGCAGCAGCCCCTATAATTTC 0 +1 0 0 +>CACCACTAAACTTAAACACTACCCCCACTTCCTCACTCTTCAGAACATAT 0 +1 0 0 +>AGTCGTATTAGACACCCATACCTCAGGATACTGCTCAGTAGCCATAGCCG 0 +1 0 0 +>ATCAACCCCAAAAAGGACCCTCCAAAATTCATAATAATACCACAACCTAC 0 +1 0 0 +>AAGAAAACCCCACAAAACTAACAACAAAAATAACACTCAAAATAAACACA 0 +1 0 0 +>GAAAAATCATCGTTGTATTTCAACTATAAGAACACCAATGACAAACATCC 0 +1 0 0 +>CCAGCCCCCTCAAACATTTCATCATGATGAAACTTCGGCTCCCTCCTAGG 0 +1 0 0 +>ACACATCAGACACGACAACTGCCTTCTCATCCGTCACTCACATCTGCCGA 0 +1 0 0 +>AATATTTTTTATCTGCCTCTTCATTCACGTAGGACGCGGCCTCTACTACG 0 +1 0 0 +>ACAGTTATAGCTACAGCATTCATGGGCTATGTCCTACCATGAGGCCAAAT 0 +1 0 0 +>ACATCGGTACTACCCTCGTCGAGTGAATCTGAGGTGGATTCTCAGTAGAC 0 +1 0 0 +>CATCACAGCCCTGGTAGTCGTACATTTACTATTTCTTCACGAAACAGGAT 0 +1 0 0 +>CCATATTATACAATTAAAGACATCCTAGGACTCCTCCTCCTGATCTTGCT 0 +1 0 0 +>ACTACACCCCAGCTAACCCTCTCAGCACTCCCCCTCATATTAAACCAGAA 0 +1 0 0 +>AGGCGGCGTATTAGCCCTAATCCTCTCCATCCTGATCCTAGCACTCATCC 0 +1 0 0 +>CAATGCGTATTCTGACTCTTAGTGGCAGACTTACTGACACTAACATGAAT 0 +1 0 0 +>CAATCCTCTACTTCTCCCTAATTCTCATTTTTATACCACTCGCAAGCACC 0 +1 0 0 +>ACCCTGGTCTTGTAAACCAGAAAAGGGGGAAAACGTTTCCTCCCAAGGAC 0 +1 0 0 +>TACTTAAACTATTCCTTGATTTCTTCCCCTAAACGACAACAATTTACCCT 0 +1 0 0 +>CTGACATGCAATATCTTATGAATGGCCTATGTACGTCGTGCATTAAATTG 0 +1 0 0 +>GTACATTATATTATTGATCGTGCATACCCCATCCAAGTCAAATCATTTCC 0 +1 0 0 +>GCGGGAAATCAGCAACCCTCCCAACTACGTGTCCCAATCCTCGCTCCGGG 0 +1 0 0 +>TCTTTCTTCAGGGCCATTCCCACCCAACCTCGCCCATTCTTTCCCCTTAA 0 +1 0 0 +>CTGTGATTTCATGCATTTGGTATCTTTTTATATTTGGGGATGCTATGACT 0 +1 0 0 +>CTTAAATTGAACGTTATTCCTCCGCATCAGCAACCATAAGGTGTTATTCA 0 +1 0 0 +>ctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacct 0 +1 0 0 +>gcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgc 0 +1 0 0 +>ctgtgcacctACCCGCGCAGTAAGCAAGTAATATAGCTTTCTTAATCAAA 0 +1 0 0 +>GCCAAACCCCAAAAACAAGACTAAACAATGCACAATACTTCATGAAGCTT 0 +1 0 0 +>GAACTTTCCCCCCGCCATTAATACCAACATGCTACTTTAATCAATAAAAT 0 +1 0 0 +>TTCTTCCCCC 0 +1 0 0
--- a/test-data/ngsc_out.cov Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,336 +0,0 @@ ->>chrM 0 -1 0 0 ->GTATTCTTACTCCATAAACACATAGGCTTGGTCCTAGCCTTTTTATTAGT 0 -1 0 0 ->CTAAATCACGTCTCTACGATTAAAAGGAGCAGGTATCAAGCACACTAGAA 0 -1 0 0 ->ATAAAAATTAAGCTATGAACGAAAGTTCGACTAAGTCATATTAAATAAGG 0 -1 0 0 ->ATAAATCTCCGGCGTAAAGCGTGTCAAAGACTAATACCAAAATAAAGTTA 0 -1 0 0 ->AAGTGACTTTAATACCTCTGACTACACGATAGCTAAGACCCAAACTGGGA 0 -1 0 0 ->AAGCTATTCGCCAGAGTACTACTAGCAACAGCCTAAAACTCAAAGGACTT 0 -1 0 0 ->CCGATAAACCCCACCATCCCTTGCTAATTCAGCCTATATACCGCCATCTT 0 -1 0 0 ->AACGTTAGGTCAAGGTGTAGCCCATGGGATGGAGAGAAATGGGCTACATT 0 -1 0 0 ->TGGAGACTAAAGGAGGATTTAGCAGTAAATTAAGAATAGAGAGCTTAATT 0 -1 0 0 ->CACAAATCATAACATAACATAAAACCGTGACCCAAACATATGAAAGGAGA 0 -1 0 0 ->TGTAGCTTAAACAAAGCATCCAGCTTACACCTAGAAGATTTCACTCAAAA 0 -1 0 0 ->TTAGTCACTTAACTAAAACATTCACCAAACCATTAAAGTATAGGAGATAG 0 -1 0 0 ->ATGCATTAAAAGTACTAAACAGCAAAGCTTACCCCTTTTACCTTTTGCAT 0 -1 0 0 ->CGAAACCAGACGAGCTACCTATGAACAGTTACAAATGAACCAACTCATCT 0 -1 0 0 ->AGCCTGGTGATAGCTGGTTGTCCAGAAACAGAATTTCAGTTCAAATTTAA 0 -1 0 0 ->AAAGGTACAGCTTTTTAGATACAGGTTACAACCTTCATTAGAGAGTAAGA 0 -1 0 0 ->TTCAAGCTCAACGACACATCTATCTTAATCCCAACAATCAACCCAAACTA 0 -1 0 0 ->TTAATATGAGTAACAAGAATTATTTCTCCTTGCATAAGCTTATATCAGAA 0 -1 0 0 ->TCATCTATTTAAACCATTGTTAACCCAACACAGGCATGCATCTATAAGGA 0 -1 0 0 ->ACCAAAAACATCACCTCTAGCATTTCCAGTATTAGAGGCACTGCCTGCCC 0 -1 0 0 ->taatcacttgttccctaaatagggacttgtatgaatggccacacgagggt 0 -1 0 0 ->cgggaatgactaaataagacgagaagaccctatggagcttTAATTAACTG 0 -1 0 0 ->TTGATTGAATCAGCAATTTCGGTTGGGGTGACCTCGGAGAACAAAACAAC 0 -1 0 0 ->TTGATCCAAACCATTGATCAACGGAACAAGTTACCCTAGGGATAACAGCG 0 -1 0 0 ->TTGGATCAAGACATCCTAATGGTGCAACCGCTATTAAGGGTTCGTTTGTT 0 -1 0 0 ->CGGTTTCTATCTATTCTATACTTTTCCCAGTACGAAAGGACAAGAAAAGT 0 -1 0 0 ->AATCTAACTAATTTATAACTTCTACCGCCCTAGAACAGGGCTCgttaggg 0 -1 0 0 ->caactcctctccctaacaacaTGTTCATAATTAACGTCCTCCTCCTAATT 0 -1 0 0 ->CTTAGGCTATATGCAACTTCGCAAAGGACCCAACATCGTAGGCCCCTATG 0 -1 0 0 ->CTACAACCACTAACATCATCGACATCCATATTCATCATCGCACCAATCCT 0 -1 0 0 ->CACTAATCAACATAAACCTAGGAATTCTATTCATACTAGCCATGTCCAGC 0 -1 0 0 ->CGCCCTAATTGGAGCTCTACGAGCAGTAGCACAAACCATCTCATACGAAG 0 -1 0 0 ->ACATTATCAACACTTATTATTACCCAAGAATACCTCTGATTAATCTTCCC 0 -1 0 0 ->ACCGAGCTCCATTTGACCTAACAGAAGGAGAATCAGAACTCGTCTCTGGA 0 -1 0 0 ->ATACGCAAACATCATCATGATAAACATCTTCACAACAACCCTATTTCTAG 0 -1 0 0 ->ATTAAAGCTCTCCTTCTAACATGTTCCTTCCTATGAATCCGAGCATCCTA 0 -1 0 0 ->TACCACTCACACTAGCCCTCTGCATATGACACGTCTCACTTCCAATCATA 0 -1 0 0 ->ACTTTGATAGAGTAAAACATAGAGGCTCAAACCCTCTTATTTctagaact 0 -1 0 0 ->ttacaccatgtcctaCAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCAT 0 -1 0 0 ->CTTCACAACTATTCTAATAACAGTTCTTCTAGGAACTATAATCGTTATAA 0 -1 0 0 ->GCCATTATCCCTATCCTAATAAAAAAGTACAATCCCCGAACCATAGAAGC 0 -1 0 0 ->TAGCGATCATCATTAACCTCATACACTCAGGCCAATGAACAATCACAAAA 0 -1 0 0 ->ACTTGGACTCACACCATTCCACTTCTGAGTACCCGAAGTCACACAGGGCA 0 -1 0 0 ->ATATCAATCCTATATCAAATCTCACCCTCAATTAACCTAAATATCTTATT 0 -1 0 0 ->AAACCCAACTACGAAAAATCATAGCATACTCGTCAATCGCGCATATAGGA 0 -1 0 0 ->ATTAATTTACATTATAATAACACTCACAATATTCATACTATTTATCCACA 0 -1 0 0 ->CTAACCACTACACTAATCTTAATTACCTTACTATCCATAGGAGGCCTCCC 0 -1 0 0 ->AAAATAGCAGCATCATCCTCCCCACACTAATAGCCATTATAGCACTACTC 0 -1 0 0 ->CCCATCCACAAACAACATAAAAATAAAATGACAATTCGAAACCAAACGAA 0 -1 0 0 ->ACCCCCATACTATCAATTTTGGACTAGGAATTTAGGTTAACATCCCAGAC 0 -1 0 0 ->TAAGGACTGCGAGACTCTATCTCACATCAATTGAACGCAAATCAAACTCT 0 -1 0 0 ->TTTAGTTAACAGCTAAATACCCTAATCAACTGGCTTCAATCTACTTCTCC 0 -1 0 0 ->TCCTTTGAATTTGCAATTCAATGTGAAAATTCACCACGGGACTTGATAAG 0 -1 0 0 ->CCATCTTACCTATGTTCATCAACCGCTGACTATTTTCAACTAACCACAAA 0 -1 0 0 ->AACTGCCCTAAGCCTCCTAATCCGTGCTGAATTAGGCCAACCTGGGACCC 0 -1 0 0 ->GTAATAATTTTCTTTATGGTCATACCCATTATAATCGGAGGATTCGGAAA 0 -1 0 0 ->TAAACAACATAAGCTTCTGATTACTTCCCCCATCATTCCTACTTCTTCTC 0 -1 0 0 ->TCCTCTAGCTGGAAATCTGGCGCATGCAGGAGCCTCTGTTGACTTAACCA 0 -1 0 0 ->TTTATTACCACAATCATTAACATAAAACCACCAGCCCTATCCCAATATCA 0 -1 0 0 ->TAGCCCTCCCGGTCCTAGCAGCAGGCATTACCATGCTTCTCACAGACCGT 0 -1 0 0 ->TTATCAACACCTATTCTGATTCTTCGGACACCCCGAAGTCTATATTCTTA 0 -1 0 0 ->AAAAAGGAACCTTTTGGCTACATGGGTATAGTGTGAGCTATAATATCCAT 0 -1 0 0 ->TAGACGTTGACACACGAGCATACTTCACATCAGCTACCATAATCATCGCT 0 -1 0 0 ->AAATATCAAATGATCTCCAGCTATACTCTGAGCTCTAGGCTTCATCTTCT 0 -1 0 0 ->GATATTGTTCTCCACGATACTTATTATGTAGTAGCACATTTCCATTATGT 0 -1 0 0 ->TCCCTCTATTCTCAGGATACACACTCAACCAAACCTGAGCAAAAATCCAC 0 -1 0 0 ->CCTTGGCCTCTCAGGAATGCCACGACGCTATTCTGATTATCCAGACGCAT 0 -1 0 0 ->GCAGTGATACTAATAATTTTCATAATTTGAGAAGCGTTCGCATCCAAACG 0 -1 0 0 ->GATGCCCCCCACCATACCACACATTTGAAGAACCCACCTACGTAAACCTA 0 -1 0 0 ->tcataaccactatgtctttctcCATCAATTGAGGTATTAGTAAAAATTAC 0 -1 0 0 ->GCCTACCCCTTCCAACTAGGATTCCAAGACGCAACATCCCCTATTATAGA 0 -1 0 0 ->GCTCTCTAGTATTATATATTATCTCATCAATACTAACAACTAAATTAACC 0 -1 0 0 ->ACCAGCCATCATCCTTATTCTAATCGCCCTCCCATCCCTACGAATTCTAT 0 -1 0 0 ->CACCAATGATACTGAAGCTACGAGTATACCGATTACGAAGACTTGACCTT 0 -1 0 0 ->TTCTAGAAGTCGACAATCGAGTGGTTCTCCCCATAGAAATAACCATCCGA 0 -1 0 0 ->AGGCCTAAAAACAGACGCTATCCCTGGGCGCCTAAATCAGACAACTCTCG 0 -1 0 0 ->TCAAACCACAGCTTTATACCAATTGTCCTTGAACTAGTTCCACTGAAACA 0 -1 0 0 ->TAGCATTAACCTTTTAAGTTAAAGATTGAGGGTTCAACCCCCTCCCTAGT 0 -1 0 0 ->AATCCTAACTCTATTTATTGTATTTCAACTAAAAATCTCAAAGCACTCCT 0 -1 0 0 ->CCTTGAGAATCAAAATGAACGAAAATCTATTCGCCTCTTTCGCTACCCCA 0 -1 0 0 ->CCTATTCCCCTCACCCAACCGACTAATCAACAATCGCCTAATCTCAATTC 0 -1 0 0 ->AGCAAAGGACAAACCTGAACTCTTATACTCATATCACTGATCCTATTCAT 0 -1 0 0 ->CACAACTATCAATAAACCTAGGCATAGCTATTCCCCTATGGGCAGGGACA 0 -1 0 0 ->ACCTCAAGGGACGCCCATTTTCCTCATCCCCATACTAGTAATTATCGAGA 0 -1 0 0 ->AACATTACCGCCGGACACCTCCTAATACACCTCATCGGAGGGGCAACACT 0 -1 0 0 ->TAATTCTACTAACTATCCTCGAATTCGCAGTAGCTATAATCCAAGCCTAC 0 -1 0 0 ->CACCAAACCCACGCTTACCACATAGTAAACCCCAGCCCATGACCACTTAC 0 -1 0 0 ->ACTTTAACTCAACCTTACTTCTAGCTATAGGGCTATTAACTAACATCCTT 0 -1 0 0 ->CCATCACACATCAATCGTTCAAAAGGGACTCCGATATGGCATAATCCTTT 0 -1 0 0 ->CACTCAAGCCTAGCCCCCACACCCGAACTAGGCGGCTGCTGACCACCCAC 0 -1 0 0 ->TGCTCCTAGCATCTGGAGTCTCTATCACCTGAGCCCACCATAGCCTAATA 0 -1 0 0 ->AGGCGTATACTTCACCCTTCTCCAAGCCTCAGAATACTATGAAGCCTCAT 0 -1 0 0 ->TTCCACGGACTACACGTAATTATCGGATCTACCTTCCTCATTGTATGTTT 0 -1 0 0 ->AAGCAGCCGCTTGATACTGACACTTCGTCGACGTAGTCTGACTATTCTTG 0 -1 0 0 ->CAATTGACTTCCAATCAATCAGCTTCGGTATAACCCGAAAAAGAATAATA 0 -1 0 0 ->ACTCATCGCATTCTGACTACCACAACTAAACATCTATGCAGAAAAAACCA 0 -1 0 0 ->TCAATAAAATTTTTCTTAGTGGCCATTACATTTCTGCTATTCGACTTAGA 0 -1 0 0 ->ACACTATACTTATCATAGCACTAGTCCTAATCTCTCTTCTAGCCATCAGC 0 -1 0 0 ->TTAGTTTAAACCAAAACAAATGATTTCGACTCATTAAACTATGATTAACT 0 -1 0 0 ->ACAGTATCCCTCGTAGGCCTACTAATGTACCGATCCCACCTAATATCCTC 0 -1 0 0 ->TAATAGTCCTAAACACCCACTTCACACTAGCTAGTATAATACCTATCATC 0 -1 0 0 ->CATAGTCTCCAATACTTATGGAGTAGACCACGTACAAAACCTTAACCTCC 0 -1 0 0 ->GACTATCAAAAAAGAATATAATCTGAATCAACACTACAACCTATAGTCTA 0 -1 0 0 ->CCTAAACTTCTCACTAATATTCTTCTCCGATCCCCTATCAGCCCCACTTC 0 -1 0 0 ->CATCTATCTAAGGAACCACTAATCCGAAAAAAACTCTACATCACCATGCT 0 -1 0 0 ->TCTCCTTCTACATCCTATTTGAAGCCACATTAGTTCCAACACTAATTATC 0 -1 0 0 ->CCTATTCTACACACTAATAGGTTCCCTCCCACTCTTAGTTGCACTAATCT 0 -1 0 0 ->AACCAAGCACTACCCGACTCTTGATCCAATATTTTCCTATGACTAGCATG 0 -1 0 0 ->TCCCAAAAGCCCATGTAGAAGCCCCAATTGCCGGATCCATAGTGCTAGCA 0 -1 0 0 ->ACTAAACCCCCAAACTAGCTTTATAGCCTACCCCTTCCTCATACTATCCC 0 -1 0 0 ->AAATCACTTATTGCATACTCCTCTGTCAGCCACATAGCCCTAGTAATCGT 0 -1 0 0 ->TAATCGCTCACGGCCTTACATCATCAATACTATTCTGCCTGGCAAACTCA 0 -1 0 0 ->AACACTTCTTCCCCTTATAGCAGCCTGATGACTATTAGCCAGCCTAACCA 0 -1 0 0 ->ATATCATCATTCTCATGATCAAATATTACCATTATCCTAATAGGAGCCAA 0 -1 0 0 ->GAGGGAAATACACACACCATATCAACAGCATTAAACCTTCATTTACACGA 0 -1 0 0 ->TAACCCTAAAATTATCCTAGGCTTTACGTACTGTAAATATAGTTTAACAA 0 -1 0 0 ->CGAGAAAGTATGCAAGAACTGCTAATTCATGCCCCCATGTCCAACAAACA 0 -1 0 0 ->CCAAAAAATTGGTGCAACTCCAAATAAAAGTAATCAACATGTTCTCCTCC 0 -1 0 0 ->CTTCAATACCTACAAAAACAGCACGTTCCCGCATCATGTAAAAAACACTA 0 -1 0 0 ->TCTGGACAAGAAACAATTATCTCAAACTGACACTGAATAACCATACAAAC 0 -1 0 0 ->TACCAGTAGCCCTATTCGTAACATGATCTATTATGGAATTCTCCCTATGA 0 -1 0 0 ->ATTCCTCATCACTATAATAATTCTAGTCACAGCTAACAACCTTTTCCAAC 0 -1 0 0 ->TGATGATACGGCCGAACAGATGCCAACACCGCGGCCCTTCAAGCAATCCT 0 -1 0 0 ->TATTCAACACCAACACATGAGACCTCCAACAAATCTTCATACTCGACCCC 0 -1 0 0 ->ATCCGCTCAATTTGGACTCCACCCATGACTTCCTTCAGCCATAGAGGGCC 0 -1 0 0 ->GTCTTCCTGCTAATCCGCTTCCATCCACTAATAGAAAACAACAAAACAAT 0 -1 0 0 ->TCTGCGCACTCACTCAAAACGATATCAAAAAAATCATTGCTTTCTCCACC 0 -1 0 0 ->CCTAGCATTCCTCCACATTTGCACTCACGCATTCTTCAAAGCTATACTAT 0 -1 0 0 ->CGAAAAATAGGCGGACTATTTAATGCAATACCCTTCACCACCACATCTCT 0 -1 0 0 ->ACTCCAAAGACCTCATCATCGAAACCGCCAACACATCGTACACCAACGCC 0 -1 0 0 ->TACCCGAATCATCTTCTTTGCACTCCTAGGGCAACCCCGCTTCCTCCCTC 0 -1 0 0 ->CTCTTAATTGGCAGCATTTTTGCCGGATTCTTCATCTCCAACAATATCTA 0 -1 0 0 ->CCCTCGCAGTAACCATCCTAGGATTTACACTAGCCCTAGAACTAAGCTTG 0 -1 0 0 ->CAACCTCCTAGGATACTACCCAACAATTATACACCGACTCCCACCGCTCG 0 -1 0 0 ->TGACTAGAAAACATCCTGCCAAAATCTATCTCCCAGTTCCAAATAAAAAC 0 -1 0 0 ->CATTCCTCATCACCCTTACCCTAAGCATACTACTTTTTAATCTCCACGAG 0 -1 0 0 ->ATCACAACCCAAGCCCCATAACTATACAATGCAGCAGCCCCTATAATTTC 0 -1 0 0 ->CACCACTAAACTTAAACACTACCCCCACTTCCTCACTCTTCAGAACATAT 0 -1 0 0 ->AGTCGTATTAGACACCCATACCTCAGGATACTGCTCAGTAGCCATAGCCG 0 -1 0 0 ->ATCAACCCCAAAAAGGACCCTCCAAAATTCATAATAATACCACAACCTAC 0 -1 0 0 ->AAGAAAACCCCACAAAACTAACAACAAAAATAACACTCAAAATAAACACA 0 -1 0 0 ->GAAAAATCATCGTTGTATTTCAACTATAAGAACACCAATGACAAACATCC 0 -1 0 0 ->CCAGCCCCCTCAAACATTTCATCATGATGAAACTTCGGCTCCCTCCTAGG 0 -1 0 0 ->ACACATCAGACACGACAACTGCCTTCTCATCCGTCACTCACATCTGCCGA 0 -1 0 0 ->AATATTTTTTATCTGCCTCTTCATTCACGTAGGACGCGGCCTCTACTACG 0 -1 0 0 ->ACAGTTATAGCTACAGCATTCATGGGCTATGTCCTACCATGAGGCCAAAT 0 -1 0 0 ->ACATCGGTACTACCCTCGTCGAGTGAATCTGAGGTGGATTCTCAGTAGAC 0 -1 0 0 ->CATCACAGCCCTGGTAGTCGTACATTTACTATTTCTTCACGAAACAGGAT 0 -1 0 0 ->CCATATTATACAATTAAAGACATCCTAGGACTCCTCCTCCTGATCTTGCT 0 -1 0 0 ->ACTACACCCCAGCTAACCCTCTCAGCACTCCCCCTCATATTAAACCAGAA 0 -1 0 0 ->AGGCGGCGTATTAGCCCTAATCCTCTCCATCCTGATCCTAGCACTCATCC 0 -1 0 0 ->CAATGCGTATTCTGACTCTTAGTGGCAGACTTACTGACACTAACATGAAT 0 -1 0 0 ->CAATCCTCTACTTCTCCCTAATTCTCATTTTTATACCACTCGCAAGCACC 0 -1 0 0 ->ACCCTGGTCTTGTAAACCAGAAAAGGGGGAAAACGTTTCCTCCCAAGGAC 0 -1 0 0 ->TACTTAAACTATTCCTTGATTTCTTCCCCTAAACGACAACAATTTACCCT 0 -1 0 0 ->CTGACATGCAATATCTTATGAATGGCCTATGTACGTCGTGCATTAAATTG 0 -1 0 0 ->GTACATTATATTATTGATCGTGCATACCCCATCCAAGTCAAATCATTTCC 0 -1 0 0 ->GCGGGAAATCAGCAACCCTCCCAACTACGTGTCCCAATCCTCGCTCCGGG 0 -1 0 0 ->TCTTTCTTCAGGGCCATTCCCACCCAACCTCGCCCATTCTTTCCCCTTAA 0 -1 0 0 ->CTGTGATTTCATGCATTTGGTATCTTTTTATATTTGGGGATGCTATGACT 0 -1 0 0 ->CTTAAATTGAACGTTATTCCTCCGCATCAGCAACCATAAGGTGTTATTCA 0 -1 0 0 ->ctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacct 0 -1 0 0 ->gcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgcacctgtgc 0 -1 0 0 ->ctgtgcacctACCCGCGCAGTAAGCAAGTAATATAGCTTTCTTAATCAAA 0 -1 0 0 ->GCCAAACCCCAAAAACAAGACTAAACAATGCACAATACTTCATGAAGCTT 0 -1 0 0 ->GAACTTTCCCCCCGCCATTAATACCAACATGCTACTTTAATCAATAAAAT 0 -1 0 0 ->TTCTTCCCCC 0 -1 0 0
--- a/test-data/out.cov Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,14 +0,0 @@ ->gi|528476637:29857558-29915771 58214 -1 29093 0 -29094 29356 2 -29357 33376 0 -33377 41951 1 -41952 58214 0 ->gi|157734152:29655295-29712160 56866 -1 29214 0 -29215 29477 1 -29478 33498 0 -33499 42073 1 -42074 48471 0 -48472 56865 1 -56866 56866 0
--- a/test-data/out.wig Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,116 +0,0 @@ -track type="wiggle_0" name="PB" -fixedStep chrom=gi|528476637:29857558-29915771 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -variableStep chrom=gi|528476637:29857558-29915771 span=1894 -56321 0 -fixedStep chrom=gi|157734152:29655295-29712160 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -variableStep chrom=gi|157734152:29655295-29712160 span=1570 -55297 0
--- a/test-data/out2.cov Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,13 +0,0 @@ ->gi|528476637:29857558-29915771 58214 -1 29092 0 -29093 29357 2 -29358 33375 0 -33376 41952 1 -41953 58214 0 ->gi|157734152:29655295-29712160 56866 -1 29213 0 -29214 29478 1 -29479 33497 0 -33498 42074 1 -42075 48470 0 -48471 56866 1
--- a/test-data/out2.wig Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,116 +0,0 @@ -track type="wiggle_0" name="PB" -fixedStep chrom=gi|528476637:29857558-29915771 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -variableStep chrom=gi|528476637:29857558-29915771 span=1894 -56321 0 -fixedStep chrom=gi|157734152:29655295-29712160 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -variableStep chrom=gi|157734152:29655295-29712160 span=1570 -55297 1
--- a/test-data/out_hist_options.cov Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,14 +0,0 @@ ->gi|528476637:29857558-29915771 58214 -1 29093 0 -29094 29356 2 -29357 33376 0 -33377 41951 1 -41952 58214 0 ->gi|157734152:29655295-29712160 56866 -1 29214 0 -29215 29477 1 -29478 33498 0 -33499 42073 1 -42074 48471 0 -48472 56865 1 -56866 56866 0
--- a/test-data/out_hist_options.wig Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,116 +0,0 @@ -track type="wiggle_0" name="PB" -fixedStep chrom=gi|528476637:29857558-29915771 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -variableStep chrom=gi|528476637:29857558-29915771 span=1894 -56321 0 -fixedStep chrom=gi|157734152:29655295-29712160 start=1 step=1024 span=1024 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -1 -1 -0 -0 -0 -0 -0 -0 -0 -1 -1 -1 -1 -1 -1 -variableStep chrom=gi|157734152:29655295-29712160 span=1570 -55297 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pbcstat_cov_05.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,14 @@ +>gi|528476637:29857558-29915771 58214 +1 29093 0 +29094 29356 2 +29357 33376 0 +33377 41951 1 +41952 58214 0 +>gi|157734152:29655295-29712160 56866 +1 29214 0 +29215 29477 1 +29478 33498 0 +33499 42073 1 +42074 48471 0 +48472 56865 1 +56866 56866 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pbcstat_cov_05.wig Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,116 @@ +track type="wiggle_0" name="PB" +fixedStep chrom=gi|528476637:29857558-29915771 start=1 step=1024 span=1024 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +1 +1 +1 +1 +1 +1 +1 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +variableStep chrom=gi|528476637:29857558-29915771 span=1894 +56321 0 +fixedStep chrom=gi|157734152:29655295-29712160 start=1 step=1024 span=1024 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +0 +1 +1 +1 +1 +1 +1 +1 +1 +0 +0 +0 +0 +0 +0 +0 +1 +1 +1 +1 +1 +1 +variableStep chrom=gi|157734152:29655295-29712160 span=1570 +55297 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pbcstat_cov_06.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,14 @@ +>gi|528476637:29857558-29915771 58214 +1 29093 0 +29094 29356 2 +29357 33376 0 +33377 41951 1 +41952 58214 0 +>gi|157734152:29655295-29712160 56866 +1 29214 0 +29215 29477 1 +29478 33498 0 +33499 42073 1 +42074 48471 0 +48472 56865 1 +56866 56866 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pbcstat_cov_07.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,13 @@ +>gi|528476637:29857558-29915771 58214 +1 29092 0 +29093 29357 2 +29358 33375 0 +33376 41952 1 +41953 58214 0 +>gi|157734152:29655295-29712160 56866 +1 29213 0 +29214 29478 1 +29479 33497 0 +33498 42074 1 +42075 48470 0 +48471 56866 1
--- a/test-data/pbcstats.tabular Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1001 +0,0 @@ -0 89010 -1 25807 -2 263 -3 0 -4 0 -5 0 -6 0 -7 0 -8 0 -9 0 -10 0 -11 0 -12 0 -13 0 -14 0 -15 0 -16 0 -17 0 -18 0 -19 0 -20 0 -21 0 -22 0 -23 0 -24 0 -25 0 -26 0 -27 0 -28 0 -29 0 -30 0 -31 0 -32 0 -33 0 -34 0 -35 0 -36 0 -37 0 -38 0 -39 0 -40 0 -41 0 -42 0 -43 0 -44 0 -45 0 -46 0 -47 0 -48 0 -49 0 -50 0 -51 0 -52 0 -53 0 -54 0 -55 0 -56 0 -57 0 -58 0 -59 0 -60 0 -61 0 -62 0 -63 0 -64 0 -65 0 -66 0 -67 0 -68 0 -69 0 -70 0 -71 0 -72 0 -73 0 -74 0 -75 0 -76 0 -77 0 -78 0 -79 0 -80 0 -81 0 -82 0 -83 0 -84 0 -85 0 -86 0 -87 0 -88 0 -89 0 -90 0 -91 0 -92 0 -93 0 -94 0 -95 0 -96 0 -97 0 -98 0 -99 0 -100 0 -101 0 -102 0 -103 0 -104 0 -105 0 -106 0 -107 0 -108 0 -109 0 -110 0 -111 0 -112 0 -113 0 -114 0 -115 0 -116 0 -117 0 -118 0 -119 0 -120 0 -121 0 -122 0 -123 0 -124 0 -125 0 -126 0 -127 0 -128 0 -129 0 -130 0 -131 0 -132 0 -133 0 -134 0 -135 0 -136 0 -137 0 -138 0 -139 0 -140 0 -141 0 -142 0 -143 0 -144 0 -145 0 -146 0 -147 0 -148 0 -149 0 -150 0 -151 0 -152 0 -153 0 -154 0 -155 0 -156 0 -157 0 -158 0 -159 0 -160 0 -161 0 -162 0 -163 0 -164 0 -165 0 -166 0 -167 0 -168 0 -169 0 -170 0 -171 0 -172 0 -173 0 -174 0 -175 0 -176 0 -177 0 -178 0 -179 0 -180 0 -181 0 -182 0 -183 0 -184 0 -185 0 -186 0 -187 0 -188 0 -189 0 -190 0 -191 0 -192 0 -193 0 -194 0 -195 0 -196 0 -197 0 -198 0 -199 0 -200 0 -201 0 -202 0 -203 0 -204 0 -205 0 -206 0 -207 0 -208 0 -209 0 -210 0 -211 0 -212 0 -213 0 -214 0 -215 0 -216 0 -217 0 -218 0 -219 0 -220 0 -221 0 -222 0 -223 0 -224 0 -225 0 -226 0 -227 0 -228 0 -229 0 -230 0 -231 0 -232 0 -233 0 -234 0 -235 0 -236 0 -237 0 -238 0 -239 0 -240 0 -241 0 -242 0 -243 0 -244 0 -245 0 -246 0 -247 0 -248 0 -249 0 -250 0 -251 0 -252 0 -253 0 -254 0 -255 0 -256 0 -257 0 -258 0 -259 0 -260 0 -261 0 -262 0 -263 0 -264 0 -265 0 -266 0 -267 0 -268 0 -269 0 -270 0 -271 0 -272 0 -273 0 -274 0 -275 0 -276 0 -277 0 -278 0 -279 0 -280 0 -281 0 -282 0 -283 0 -284 0 -285 0 -286 0 -287 0 -288 0 -289 0 -290 0 -291 0 -292 0 -293 0 -294 0 -295 0 -296 0 -297 0 -298 0 -299 0 -300 0 -301 0 -302 0 -303 0 -304 0 -305 0 -306 0 -307 0 -308 0 -309 0 -310 0 -311 0 -312 0 -313 0 -314 0 -315 0 -316 0 -317 0 -318 0 -319 0 -320 0 -321 0 -322 0 -323 0 -324 0 -325 0 -326 0 -327 0 -328 0 -329 0 -330 0 -331 0 -332 0 -333 0 -334 0 -335 0 -336 0 -337 0 -338 0 -339 0 -340 0 -341 0 -342 0 -343 0 -344 0 -345 0 -346 0 -347 0 -348 0 -349 0 -350 0 -351 0 -352 0 -353 0 -354 0 -355 0 -356 0 -357 0 -358 0 -359 0 -360 0 -361 0 -362 0 -363 0 -364 0 -365 0 -366 0 -367 0 -368 0 -369 0 -370 0 -371 0 -372 0 -373 0 -374 0 -375 0 -376 0 -377 0 -378 0 -379 0 -380 0 -381 0 -382 0 -383 0 -384 0 -385 0 -386 0 -387 0 -388 0 -389 0 -390 0 -391 0 -392 0 -393 0 -394 0 -395 0 -396 0 -397 0 -398 0 -399 0 -400 0 -401 0 -402 0 -403 0 -404 0 -405 0 -406 0 -407 0 -408 0 -409 0 -410 0 -411 0 -412 0 -413 0 -414 0 -415 0 -416 0 -417 0 -418 0 -419 0 -420 0 -421 0 -422 0 -423 0 -424 0 -425 0 -426 0 -427 0 -428 0 -429 0 -430 0 -431 0 -432 0 -433 0 -434 0 -435 0 -436 0 -437 0 -438 0 -439 0 -440 0 -441 0 -442 0 -443 0 -444 0 -445 0 -446 0 -447 0 -448 0 -449 0 -450 0 -451 0 -452 0 -453 0 -454 0 -455 0 -456 0 -457 0 -458 0 -459 0 -460 0 -461 0 -462 0 -463 0 -464 0 -465 0 -466 0 -467 0 -468 0 -469 0 -470 0 -471 0 -472 0 -473 0 -474 0 -475 0 -476 0 -477 0 -478 0 -479 0 -480 0 -481 0 -482 0 -483 0 -484 0 -485 0 -486 0 -487 0 -488 0 -489 0 -490 0 -491 0 -492 0 -493 0 -494 0 -495 0 -496 0 -497 0 -498 0 -499 0 -500 0 -501 0 -502 0 -503 0 -504 0 -505 0 -506 0 -507 0 -508 0 -509 0 -510 0 -511 0 -512 0 -513 0 -514 0 -515 0 -516 0 -517 0 -518 0 -519 0 -520 0 -521 0 -522 0 -523 0 -524 0 -525 0 -526 0 -527 0 -528 0 -529 0 -530 0 -531 0 -532 0 -533 0 -534 0 -535 0 -536 0 -537 0 -538 0 -539 0 -540 0 -541 0 -542 0 -543 0 -544 0 -545 0 -546 0 -547 0 -548 0 -549 0 -550 0 -551 0 -552 0 -553 0 -554 0 -555 0 -556 0 -557 0 -558 0 -559 0 -560 0 -561 0 -562 0 -563 0 -564 0 -565 0 -566 0 -567 0 -568 0 -569 0 -570 0 -571 0 -572 0 -573 0 -574 0 -575 0 -576 0 -577 0 -578 0 -579 0 -580 0 -581 0 -582 0 -583 0 -584 0 -585 0 -586 0 -587 0 -588 0 -589 0 -590 0 -591 0 -592 0 -593 0 -594 0 -595 0 -596 0 -597 0 -598 0 -599 0 -600 0 -601 0 -602 0 -603 0 -604 0 -605 0 -606 0 -607 0 -608 0 -609 0 -610 0 -611 0 -612 0 -613 0 -614 0 -615 0 -616 0 -617 0 -618 0 -619 0 -620 0 -621 0 -622 0 -623 0 -624 0 -625 0 -626 0 -627 0 -628 0 -629 0 -630 0 -631 0 -632 0 -633 0 -634 0 -635 0 -636 0 -637 0 -638 0 -639 0 -640 0 -641 0 -642 0 -643 0 -644 0 -645 0 -646 0 -647 0 -648 0 -649 0 -650 0 -651 0 -652 0 -653 0 -654 0 -655 0 -656 0 -657 0 -658 0 -659 0 -660 0 -661 0 -662 0 -663 0 -664 0 -665 0 -666 0 -667 0 -668 0 -669 0 -670 0 -671 0 -672 0 -673 0 -674 0 -675 0 -676 0 -677 0 -678 0 -679 0 -680 0 -681 0 -682 0 -683 0 -684 0 -685 0 -686 0 -687 0 -688 0 -689 0 -690 0 -691 0 -692 0 -693 0 -694 0 -695 0 -696 0 -697 0 -698 0 -699 0 -700 0 -701 0 -702 0 -703 0 -704 0 -705 0 -706 0 -707 0 -708 0 -709 0 -710 0 -711 0 -712 0 -713 0 -714 0 -715 0 -716 0 -717 0 -718 0 -719 0 -720 0 -721 0 -722 0 -723 0 -724 0 -725 0 -726 0 -727 0 -728 0 -729 0 -730 0 -731 0 -732 0 -733 0 -734 0 -735 0 -736 0 -737 0 -738 0 -739 0 -740 0 -741 0 -742 0 -743 0 -744 0 -745 0 -746 0 -747 0 -748 0 -749 0 -750 0 -751 0 -752 0 -753 0 -754 0 -755 0 -756 0 -757 0 -758 0 -759 0 -760 0 -761 0 -762 0 -763 0 -764 0 -765 0 -766 0 -767 0 -768 0 -769 0 -770 0 -771 0 -772 0 -773 0 -774 0 -775 0 -776 0 -777 0 -778 0 -779 0 -780 0 -781 0 -782 0 -783 0 -784 0 -785 0 -786 0 -787 0 -788 0 -789 0 -790 0 -791 0 -792 0 -793 0 -794 0 -795 0 -796 0 -797 0 -798 0 -799 0 -800 0 -801 0 -802 0 -803 0 -804 0 -805 0 -806 0 -807 0 -808 0 -809 0 -810 0 -811 0 -812 0 -813 0 -814 0 -815 0 -816 0 -817 0 -818 0 -819 0 -820 0 -821 0 -822 0 -823 0 -824 0 -825 0 -826 0 -827 0 -828 0 -829 0 -830 0 -831 0 -832 0 -833 0 -834 0 -835 0 -836 0 -837 0 -838 0 -839 0 -840 0 -841 0 -842 0 -843 0 -844 0 -845 0 -846 0 -847 0 -848 0 -849 0 -850 0 -851 0 -852 0 -853 0 -854 0 -855 0 -856 0 -857 0 -858 0 -859 0 -860 0 -861 0 -862 0 -863 0 -864 0 -865 0 -866 0 -867 0 -868 0 -869 0 -870 0 -871 0 -872 0 -873 0 -874 0 -875 0 -876 0 -877 0 -878 0 -879 0 -880 0 -881 0 -882 0 -883 0 -884 0 -885 0 -886 0 -887 0 -888 0 -889 0 -890 0 -891 0 -892 0 -893 0 -894 0 -895 0 -896 0 -897 0 -898 0 -899 0 -900 0 -901 0 -902 0 -903 0 -904 0 -905 0 -906 0 -907 0 -908 0 -909 0 -910 0 -911 0 -912 0 -913 0 -914 0 -915 0 -916 0 -917 0 -918 0 -919 0 -920 0 -921 0 -922 0 -923 0 -924 0 -925 0 -926 0 -927 0 -928 0 -929 0 -930 0 -931 0 -932 0 -933 0 -934 0 -935 0 -936 0 -937 0 -938 0 -939 0 -940 0 -941 0 -942 0 -943 0 -944 0 -945 0 -946 0 -947 0 -948 0 -949 0 -950 0 -951 0 -952 0 -953 0 -954 0 -955 0 -956 0 -957 0 -958 0 -959 0 -960 0 -961 0 -962 0 -963 0 -964 0 -965 0 -966 0 -967 0 -968 0 -969 0 -970 0 -971 0 -972 0 -973 0 -974 0 -975 0 -976 0 -977 0 -978 0 -979 0 -980 0 -981 0 -982 0 -983 0 -984 0 -985 0 -986 0 -987 0 -988 0 -989 0 -990 0 -991 0 -992 0 -993 0 -994 0 -995 0 -996 0 -997 0 -998 0 -999 0 -1000 0
--- a/test-data/pbcstats2.tabular Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,501 +0,0 @@ -0 89000 -1 25815 -2 265 -3 0 -4 0 -5 0 -6 0 -7 0 -8 0 -9 0 -10 0 -11 0 -12 0 -13 0 -14 0 -15 0 -16 0 -17 0 -18 0 -19 0 -20 0 -21 0 -22 0 -23 0 -24 0 -25 0 -26 0 -27 0 -28 0 -29 0 -30 0 -31 0 -32 0 -33 0 -34 0 -35 0 -36 0 -37 0 -38 0 -39 0 -40 0 -41 0 -42 0 -43 0 -44 0 -45 0 -46 0 -47 0 -48 0 -49 0 -50 0 -51 0 -52 0 -53 0 -54 0 -55 0 -56 0 -57 0 -58 0 -59 0 -60 0 -61 0 -62 0 -63 0 -64 0 -65 0 -66 0 -67 0 -68 0 -69 0 -70 0 -71 0 -72 0 -73 0 -74 0 -75 0 -76 0 -77 0 -78 0 -79 0 -80 0 -81 0 -82 0 -83 0 -84 0 -85 0 -86 0 -87 0 -88 0 -89 0 -90 0 -91 0 -92 0 -93 0 -94 0 -95 0 -96 0 -97 0 -98 0 -99 0 -100 0 -101 0 -102 0 -103 0 -104 0 -105 0 -106 0 -107 0 -108 0 -109 0 -110 0 -111 0 -112 0 -113 0 -114 0 -115 0 -116 0 -117 0 -118 0 -119 0 -120 0 -121 0 -122 0 -123 0 -124 0 -125 0 -126 0 -127 0 -128 0 -129 0 -130 0 -131 0 -132 0 -133 0 -134 0 -135 0 -136 0 -137 0 -138 0 -139 0 -140 0 -141 0 -142 0 -143 0 -144 0 -145 0 -146 0 -147 0 -148 0 -149 0 -150 0 -151 0 -152 0 -153 0 -154 0 -155 0 -156 0 -157 0 -158 0 -159 0 -160 0 -161 0 -162 0 -163 0 -164 0 -165 0 -166 0 -167 0 -168 0 -169 0 -170 0 -171 0 -172 0 -173 0 -174 0 -175 0 -176 0 -177 0 -178 0 -179 0 -180 0 -181 0 -182 0 -183 0 -184 0 -185 0 -186 0 -187 0 -188 0 -189 0 -190 0 -191 0 -192 0 -193 0 -194 0 -195 0 -196 0 -197 0 -198 0 -199 0 -200 0 -201 0 -202 0 -203 0 -204 0 -205 0 -206 0 -207 0 -208 0 -209 0 -210 0 -211 0 -212 0 -213 0 -214 0 -215 0 -216 0 -217 0 -218 0 -219 0 -220 0 -221 0 -222 0 -223 0 -224 0 -225 0 -226 0 -227 0 -228 0 -229 0 -230 0 -231 0 -232 0 -233 0 -234 0 -235 0 -236 0 -237 0 -238 0 -239 0 -240 0 -241 0 -242 0 -243 0 -244 0 -245 0 -246 0 -247 0 -248 0 -249 0 -250 0 -251 0 -252 0 -253 0 -254 0 -255 0 -256 0 -257 0 -258 0 -259 0 -260 0 -261 0 -262 0 -263 0 -264 0 -265 0 -266 0 -267 0 -268 0 -269 0 -270 0 -271 0 -272 0 -273 0 -274 0 -275 0 -276 0 -277 0 -278 0 -279 0 -280 0 -281 0 -282 0 -283 0 -284 0 -285 0 -286 0 -287 0 -288 0 -289 0 -290 0 -291 0 -292 0 -293 0 -294 0 -295 0 -296 0 -297 0 -298 0 -299 0 -300 0 -301 0 -302 0 -303 0 -304 0 -305 0 -306 0 -307 0 -308 0 -309 0 -310 0 -311 0 -312 0 -313 0 -314 0 -315 0 -316 0 -317 0 -318 0 -319 0 -320 0 -321 0 -322 0 -323 0 -324 0 -325 0 -326 0 -327 0 -328 0 -329 0 -330 0 -331 0 -332 0 -333 0 -334 0 -335 0 -336 0 -337 0 -338 0 -339 0 -340 0 -341 0 -342 0 -343 0 -344 0 -345 0 -346 0 -347 0 -348 0 -349 0 -350 0 -351 0 -352 0 -353 0 -354 0 -355 0 -356 0 -357 0 -358 0 -359 0 -360 0 -361 0 -362 0 -363 0 -364 0 -365 0 -366 0 -367 0 -368 0 -369 0 -370 0 -371 0 -372 0 -373 0 -374 0 -375 0 -376 0 -377 0 -378 0 -379 0 -380 0 -381 0 -382 0 -383 0 -384 0 -385 0 -386 0 -387 0 -388 0 -389 0 -390 0 -391 0 -392 0 -393 0 -394 0 -395 0 -396 0 -397 0 -398 0 -399 0 -400 0 -401 0 -402 0 -403 0 -404 0 -405 0 -406 0 -407 0 -408 0 -409 0 -410 0 -411 0 -412 0 -413 0 -414 0 -415 0 -416 0 -417 0 -418 0 -419 0 -420 0 -421 0 -422 0 -423 0 -424 0 -425 0 -426 0 -427 0 -428 0 -429 0 -430 0 -431 0 -432 0 -433 0 -434 0 -435 0 -436 0 -437 0 -438 0 -439 0 -440 0 -441 0 -442 0 -443 0 -444 0 -445 0 -446 0 -447 0 -448 0 -449 0 -450 0 -451 0 -452 0 -453 0 -454 0 -455 0 -456 0 -457 0 -458 0 -459 0 -460 0 -461 0 -462 0 -463 0 -464 0 -465 0 -466 0 -467 0 -468 0 -469 0 -470 0 -471 0 -472 0 -473 0 -474 0 -475 0 -476 0 -477 0 -478 0 -479 0 -480 0 -481 0 -482 0 -483 0 -484 0 -485 0 -486 0 -487 0 -488 0 -489 0 -490 0 -491 0 -492 0 -493 0 -494 0 -495 0 -496 0 -497 0 -498 0 -499 0 -500 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/pbcstats_05.tabular Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1001 @@ +0 89010 +1 25807 +2 263 +3 0 +4 0 +5 0 +6 0 +7 0 +8 0 +9 0 +10 0 +11 0 +12 0 +13 0 +14 0 +15 0 +16 0 +17 0 +18 0 +19 0 +20 0 +21 0 +22 0 +23 0 +24 0 +25 0 +26 0 +27 0 +28 0 +29 0 +30 0 +31 0 +32 0 +33 0 +34 0 +35 0 +36 0 +37 0 +38 0 +39 0 +40 0 +41 0 +42 0 +43 0 +44 0 +45 0 +46 0 +47 0 +48 0 +49 0 +50 0 +51 0 +52 0 +53 0 +54 0 +55 0 +56 0 +57 0 +58 0 +59 0 +60 0 +61 0 +62 0 +63 0 +64 0 +65 0 +66 0 +67 0 +68 0 +69 0 +70 0 +71 0 +72 0 +73 0 +74 0 +75 0 +76 0 +77 0 +78 0 +79 0 +80 0 +81 0 +82 0 +83 0 +84 0 +85 0 +86 0 +87 0 +88 0 +89 0 +90 0 +91 0 +92 0 +93 0 +94 0 +95 0 +96 0 +97 0 +98 0 +99 0 +100 0 +101 0 +102 0 +103 0 +104 0 +105 0 +106 0 +107 0 +108 0 +109 0 +110 0 +111 0 +112 0 +113 0 +114 0 +115 0 +116 0 +117 0 +118 0 +119 0 +120 0 +121 0 +122 0 +123 0 +124 0 +125 0 +126 0 +127 0 +128 0 +129 0 +130 0 +131 0 +132 0 +133 0 +134 0 +135 0 +136 0 +137 0 +138 0 +139 0 +140 0 +141 0 +142 0 +143 0 +144 0 +145 0 +146 0 +147 0 +148 0 +149 0 +150 0 +151 0 +152 0 +153 0 +154 0 +155 0 +156 0 +157 0 +158 0 +159 0 +160 0 +161 0 +162 0 +163 0 +164 0 +165 0 +166 0 +167 0 +168 0 +169 0 +170 0 +171 0 +172 0 +173 0 +174 0 +175 0 +176 0 +177 0 +178 0 +179 0 +180 0 +181 0 +182 0 +183 0 +184 0 +185 0 +186 0 +187 0 +188 0 +189 0 +190 0 +191 0 +192 0 +193 0 +194 0 +195 0 +196 0 +197 0 +198 0 +199 0 +200 0 +201 0 +202 0 +203 0 +204 0 +205 0 +206 0 +207 0 +208 0 +209 0 +210 0 +211 0 +212 0 +213 0 +214 0 +215 0 +216 0 +217 0 +218 0 +219 0 +220 0 +221 0 +222 0 +223 0 +224 0 +225 0 +226 0 +227 0 +228 0 +229 0 +230 0 +231 0 +232 0 +233 0 +234 0 +235 0 +236 0 +237 0 +238 0 +239 0 +240 0 +241 0 +242 0 +243 0 +244 0 +245 0 +246 0 +247 0 +248 0 +249 0 +250 0 +251 0 +252 0 +253 0 +254 0 +255 0 +256 0 +257 0 +258 0 +259 0 +260 0 +261 0 +262 0 +263 0 +264 0 +265 0 +266 0 +267 0 +268 0 +269 0 +270 0 +271 0 +272 0 +273 0 +274 0 +275 0 +276 0 +277 0 +278 0 +279 0 +280 0 +281 0 +282 0 +283 0 +284 0 +285 0 +286 0 +287 0 +288 0 +289 0 +290 0 +291 0 +292 0 +293 0 +294 0 +295 0 +296 0 +297 0 +298 0 +299 0 +300 0 +301 0 +302 0 +303 0 +304 0 +305 0 +306 0 +307 0 +308 0 +309 0 +310 0 +311 0 +312 0 +313 0 +314 0 +315 0 +316 0 +317 0 +318 0 +319 0 +320 0 +321 0 +322 0 +323 0 +324 0 +325 0 +326 0 +327 0 +328 0 +329 0 +330 0 +331 0 +332 0 +333 0 +334 0 +335 0 +336 0 +337 0 +338 0 +339 0 +340 0 +341 0 +342 0 +343 0 +344 0 +345 0 +346 0 +347 0 +348 0 +349 0 +350 0 +351 0 +352 0 +353 0 +354 0 +355 0 +356 0 +357 0 +358 0 +359 0 +360 0 +361 0 +362 0 +363 0 +364 0 +365 0 +366 0 +367 0 +368 0 +369 0 +370 0 +371 0 +372 0 +373 0 +374 0 +375 0 +376 0 +377 0 +378 0 +379 0 +380 0 +381 0 +382 0 +383 0 +384 0 +385 0 +386 0 +387 0 +388 0 +389 0 +390 0 +391 0 +392 0 +393 0 +394 0 +395 0 +396 0 +397 0 +398 0 +399 0 +400 0 +401 0 +402 0 +403 0 +404 0 +405 0 +406 0 +407 0 +408 0 +409 0 +410 0 +411 0 +412 0 +413 0 +414 0 +415 0 +416 0 +417 0 +418 0 +419 0 +420 0 +421 0 +422 0 +423 0 +424 0 +425 0 +426 0 +427 0 +428 0 +429 0 +430 0 +431 0 +432 0 +433 0 +434 0 +435 0 +436 0 +437 0 +438 0 +439 0 +440 0 +441 0 +442 0 +443 0 +444 0 +445 0 +446 0 +447 0 +448 0 +449 0 +450 0 +451 0 +452 0 +453 0 +454 0 +455 0 +456 0 +457 0 +458 0 +459 0 +460 0 +461 0 +462 0 +463 0 +464 0 +465 0 +466 0 +467 0 +468 0 +469 0 +470 0 +471 0 +472 0 +473 0 +474 0 +475 0 +476 0 +477 0 +478 0 +479 0 +480 0 +481 0 +482 0 +483 0 +484 0 +485 0 +486 0 +487 0 +488 0 +489 0 +490 0 +491 0 +492 0 +493 0 +494 0 +495 0 +496 0 +497 0 +498 0 +499 0 +500 0 +501 0 +502 0 +503 0 +504 0 +505 0 +506 0 +507 0 +508 0 +509 0 +510 0 +511 0 +512 0 +513 0 +514 0 +515 0 +516 0 +517 0 +518 0 +519 0 +520 0 +521 0 +522 0 +523 0 +524 0 +525 0 +526 0 +527 0 +528 0 +529 0 +530 0 +531 0 +532 0 +533 0 +534 0 +535 0 +536 0 +537 0 +538 0 +539 0 +540 0 +541 0 +542 0 +543 0 +544 0 +545 0 +546 0 +547 0 +548 0 +549 0 +550 0 +551 0 +552 0 +553 0 +554 0 +555 0 +556 0 +557 0 +558 0 +559 0 +560 0 +561 0 +562 0 +563 0 +564 0 +565 0 +566 0 +567 0 +568 0 +569 0 +570 0 +571 0 +572 0 +573 0 +574 0 +575 0 +576 0 +577 0 +578 0 +579 0 +580 0 +581 0 +582 0 +583 0 +584 0 +585 0 +586 0 +587 0 +588 0 +589 0 +590 0 +591 0 +592 0 +593 0 +594 0 +595 0 +596 0 +597 0 +598 0 +599 0 +600 0 +601 0 +602 0 +603 0 +604 0 +605 0 +606 0 +607 0 +608 0 +609 0 +610 0 +611 0 +612 0 +613 0 +614 0 +615 0 +616 0 +617 0 +618 0 +619 0 +620 0 +621 0 +622 0 +623 0 +624 0 +625 0 +626 0 +627 0 +628 0 +629 0 +630 0 +631 0 +632 0 +633 0 +634 0 +635 0 +636 0 +637 0 +638 0 +639 0 +640 0 +641 0 +642 0 +643 0 +644 0 +645 0 +646 0 +647 0 +648 0 +649 0 +650 0 +651 0 +652 0 +653 0 +654 0 +655 0 +656 0 +657 0 +658 0 +659 0 +660 0 +661 0 +662 0 +663 0 +664 0 +665 0 +666 0 +667 0 +668 0 +669 0 +670 0 +671 0 +672 0 +673 0 +674 0 +675 0 +676 0 +677 0 +678 0 +679 0 +680 0 +681 0 +682 0 +683 0 +684 0 +685 0 +686 0 +687 0 +688 0 +689 0 +690 0 +691 0 +692 0 +693 0 +694 0 +695 0 +696 0 +697 0 +698 0 +699 0 +700 0 +701 0 +702 0 +703 0 +704 0 +705 0 +706 0 +707 0 +708 0 +709 0 +710 0 +711 0 +712 0 +713 0 +714 0 +715 0 +716 0 +717 0 +718 0 +719 0 +720 0 +721 0 +722 0 +723 0 +724 0 +725 0 +726 0 +727 0 +728 0 +729 0 +730 0 +731 0 +732 0 +733 0 +734 0 +735 0 +736 0 +737 0 +738 0 +739 0 +740 0 +741 0 +742 0 +743 0 +744 0 +745 0 +746 0 +747 0 +748 0 +749 0 +750 0 +751 0 +752 0 +753 0 +754 0 +755 0 +756 0 +757 0 +758 0 +759 0 +760 0 +761 0 +762 0 +763 0 +764 0 +765 0 +766 0 +767 0 +768 0 +769 0 +770 0 +771 0 +772 0 +773 0 +774 0 +775 0 +776 0 +777 0 +778 0 +779 0 +780 0 +781 0 +782 0 +783 0 +784 0 +785 0 +786 0 +787 0 +788 0 +789 0 +790 0 +791 0 +792 0 +793 0 +794 0 +795 0 +796 0 +797 0 +798 0 +799 0 +800 0 +801 0 +802 0 +803 0 +804 0 +805 0 +806 0 +807 0 +808 0 +809 0 +810 0 +811 0 +812 0 +813 0 +814 0 +815 0 +816 0 +817 0 +818 0 +819 0 +820 0 +821 0 +822 0 +823 0 +824 0 +825 0 +826 0 +827 0 +828 0 +829 0 +830 0 +831 0 +832 0 +833 0 +834 0 +835 0 +836 0 +837 0 +838 0 +839 0 +840 0 +841 0 +842 0 +843 0 +844 0 +845 0 +846 0 +847 0 +848 0 +849 0 +850 0 +851 0 +852 0 +853 0 +854 0 +855 0 +856 0 +857 0 +858 0 +859 0 +860 0 +861 0 +862 0 +863 0 +864 0 +865 0 +866 0 +867 0 +868 0 +869 0 +870 0 +871 0 +872 0 +873 0 +874 0 +875 0 +876 0 +877 0 +878 0 +879 0 +880 0 +881 0 +882 0 +883 0 +884 0 +885 0 +886 0 +887 0 +888 0 +889 0 +890 0 +891 0 +892 0 +893 0 +894 0 +895 0 +896 0 +897 0 +898 0 +899 0 +900 0 +901 0 +902 0 +903 0 +904 0 +905 0 +906 0 +907 0 +908 0 +909 0 +910 0 +911 0 +912 0 +913 0 +914 0 +915 0 +916 0 +917 0 +918 0 +919 0 +920 0 +921 0 +922 0 +923 0 +924 0 +925 0 +926 0 +927 0 +928 0 +929 0 +930 0 +931 0 +932 0 +933 0 +934 0 +935 0 +936 0 +937 0 +938 0 +939 0 +940 0 +941 0 +942 0 +943 0 +944 0 +945 0 +946 0 +947 0 +948 0 +949 0 +950 0 +951 0 +952 0 +953 0 +954 0 +955 0 +956 0 +957 0 +958 0 +959 0 +960 0 +961 0 +962 0 +963 0 +964 0 +965 0 +966 0 +967 0 +968 0 +969 0 +970 0 +971 0 +972 0 +973 0 +974 0 +975 0 +976 0 +977 0 +978 0 +979 0 +980 0 +981 0 +982 0 +983 0 +984 0 +985 0 +986 0 +987 0 +988 0 +989 0 +990 0 +991 0 +992 0 +993 0 +994 0 +995 0 +996 0 +997 0 +998 0 +999 0 +1000 0
--- a/test-data/pbcstats_hist_options.tabular Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1001 +0,0 @@ -0 89010 -1 25807 -2 263 -3 0 -4 0 -5 0 -6 0 -7 0 -8 0 -9 0 -10 0 -11 0 -12 0 -13 0 -14 0 -15 0 -16 0 -17 0 -18 0 -19 0 -20 0 -21 0 -22 0 -23 0 -24 0 -25 0 -26 0 -27 0 -28 0 -29 0 -30 0 -31 0 -32 0 -33 0 -34 0 -35 0 -36 0 -37 0 -38 0 -39 0 -40 0 -41 0 -42 0 -43 0 -44 0 -45 0 -46 0 -47 0 -48 0 -49 0 -50 0 -51 0 -52 0 -53 0 -54 0 -55 0 -56 0 -57 0 -58 0 -59 0 -60 0 -61 0 -62 0 -63 0 -64 0 -65 0 -66 0 -67 0 -68 0 -69 0 -70 0 -71 0 -72 0 -73 0 -74 0 -75 0 -76 0 -77 0 -78 0 -79 0 -80 0 -81 0 -82 0 -83 0 -84 0 -85 0 -86 0 -87 0 -88 0 -89 0 -90 0 -91 0 -92 0 -93 0 -94 0 -95 0 -96 0 -97 0 -98 0 -99 0 -100 0 -101 0 -102 0 -103 0 -104 0 -105 0 -106 0 -107 0 -108 0 -109 0 -110 0 -111 0 -112 0 -113 0 -114 0 -115 0 -116 0 -117 0 -118 0 -119 0 -120 0 -121 0 -122 0 -123 0 -124 0 -125 0 -126 0 -127 0 -128 0 -129 0 -130 0 -131 0 -132 0 -133 0 -134 0 -135 0 -136 0 -137 0 -138 0 -139 0 -140 0 -141 0 -142 0 -143 0 -144 0 -145 0 -146 0 -147 0 -148 0 -149 0 -150 0 -151 0 -152 0 -153 0 -154 0 -155 0 -156 0 -157 0 -158 0 -159 0 -160 0 -161 0 -162 0 -163 0 -164 0 -165 0 -166 0 -167 0 -168 0 -169 0 -170 0 -171 0 -172 0 -173 0 -174 0 -175 0 -176 0 -177 0 -178 0 -179 0 -180 0 -181 0 -182 0 -183 0 -184 0 -185 0 -186 0 -187 0 -188 0 -189 0 -190 0 -191 0 -192 0 -193 0 -194 0 -195 0 -196 0 -197 0 -198 0 -199 0 -200 0 -201 0 -202 0 -203 0 -204 0 -205 0 -206 0 -207 0 -208 0 -209 0 -210 0 -211 0 -212 0 -213 0 -214 0 -215 0 -216 0 -217 0 -218 0 -219 0 -220 0 -221 0 -222 0 -223 0 -224 0 -225 0 -226 0 -227 0 -228 0 -229 0 -230 0 -231 0 -232 0 -233 0 -234 0 -235 0 -236 0 -237 0 -238 0 -239 0 -240 0 -241 0 -242 0 -243 0 -244 0 -245 0 -246 0 -247 0 -248 0 -249 0 -250 0 -251 0 -252 0 -253 0 -254 0 -255 0 -256 0 -257 0 -258 0 -259 0 -260 0 -261 0 -262 0 -263 0 -264 0 -265 0 -266 0 -267 0 -268 0 -269 0 -270 0 -271 0 -272 0 -273 0 -274 0 -275 0 -276 0 -277 0 -278 0 -279 0 -280 0 -281 0 -282 0 -283 0 -284 0 -285 0 -286 0 -287 0 -288 0 -289 0 -290 0 -291 0 -292 0 -293 0 -294 0 -295 0 -296 0 -297 0 -298 0 -299 0 -300 0 -301 0 -302 0 -303 0 -304 0 -305 0 -306 0 -307 0 -308 0 -309 0 -310 0 -311 0 -312 0 -313 0 -314 0 -315 0 -316 0 -317 0 -318 0 -319 0 -320 0 -321 0 -322 0 -323 0 -324 0 -325 0 -326 0 -327 0 -328 0 -329 0 -330 0 -331 0 -332 0 -333 0 -334 0 -335 0 -336 0 -337 0 -338 0 -339 0 -340 0 -341 0 -342 0 -343 0 -344 0 -345 0 -346 0 -347 0 -348 0 -349 0 -350 0 -351 0 -352 0 -353 0 -354 0 -355 0 -356 0 -357 0 -358 0 -359 0 -360 0 -361 0 -362 0 -363 0 -364 0 -365 0 -366 0 -367 0 -368 0 -369 0 -370 0 -371 0 -372 0 -373 0 -374 0 -375 0 -376 0 -377 0 -378 0 -379 0 -380 0 -381 0 -382 0 -383 0 -384 0 -385 0 -386 0 -387 0 -388 0 -389 0 -390 0 -391 0 -392 0 -393 0 -394 0 -395 0 -396 0 -397 0 -398 0 -399 0 -400 0 -401 0 -402 0 -403 0 -404 0 -405 0 -406 0 -407 0 -408 0 -409 0 -410 0 -411 0 -412 0 -413 0 -414 0 -415 0 -416 0 -417 0 -418 0 -419 0 -420 0 -421 0 -422 0 -423 0 -424 0 -425 0 -426 0 -427 0 -428 0 -429 0 -430 0 -431 0 -432 0 -433 0 -434 0 -435 0 -436 0 -437 0 -438 0 -439 0 -440 0 -441 0 -442 0 -443 0 -444 0 -445 0 -446 0 -447 0 -448 0 -449 0 -450 0 -451 0 -452 0 -453 0 -454 0 -455 0 -456 0 -457 0 -458 0 -459 0 -460 0 -461 0 -462 0 -463 0 -464 0 -465 0 -466 0 -467 0 -468 0 -469 0 -470 0 -471 0 -472 0 -473 0 -474 0 -475 0 -476 0 -477 0 -478 0 -479 0 -480 0 -481 0 -482 0 -483 0 -484 0 -485 0 -486 0 -487 0 -488 0 -489 0 -490 0 -491 0 -492 0 -493 0 -494 0 -495 0 -496 0 -497 0 -498 0 -499 0 -500 0 -501 0 -502 0 -503 0 -504 0 -505 0 -506 0 -507 0 -508 0 -509 0 -510 0 -511 0 -512 0 -513 0 -514 0 -515 0 -516 0 -517 0 -518 0 -519 0 -520 0 -521 0 -522 0 -523 0 -524 0 -525 0 -526 0 -527 0 -528 0 -529 0 -530 0 -531 0 -532 0 -533 0 -534 0 -535 0 -536 0 -537 0 -538 0 -539 0 -540 0 -541 0 -542 0 -543 0 -544 0 -545 0 -546 0 -547 0 -548 0 -549 0 -550 0 -551 0 -552 0 -553 0 -554 0 -555 0 -556 0 -557 0 -558 0 -559 0 -560 0 -561 0 -562 0 -563 0 -564 0 -565 0 -566 0 -567 0 -568 0 -569 0 -570 0 -571 0 -572 0 -573 0 -574 0 -575 0 -576 0 -577 0 -578 0 -579 0 -580 0 -581 0 -582 0 -583 0 -584 0 -585 0 -586 0 -587 0 -588 0 -589 0 -590 0 -591 0 -592 0 -593 0 -594 0 -595 0 -596 0 -597 0 -598 0 -599 0 -600 0 -601 0 -602 0 -603 0 -604 0 -605 0 -606 0 -607 0 -608 0 -609 0 -610 0 -611 0 -612 0 -613 0 -614 0 -615 0 -616 0 -617 0 -618 0 -619 0 -620 0 -621 0 -622 0 -623 0 -624 0 -625 0 -626 0 -627 0 -628 0 -629 0 -630 0 -631 0 -632 0 -633 0 -634 0 -635 0 -636 0 -637 0 -638 0 -639 0 -640 0 -641 0 -642 0 -643 0 -644 0 -645 0 -646 0 -647 0 -648 0 -649 0 -650 0 -651 0 -652 0 -653 0 -654 0 -655 0 -656 0 -657 0 -658 0 -659 0 -660 0 -661 0 -662 0 -663 0 -664 0 -665 0 -666 0 -667 0 -668 0 -669 0 -670 0 -671 0 -672 0 -673 0 -674 0 -675 0 -676 0 -677 0 -678 0 -679 0 -680 0 -681 0 -682 0 -683 0 -684 0 -685 0 -686 0 -687 0 -688 0 -689 0 -690 0 -691 0 -692 0 -693 0 -694 0 -695 0 -696 0 -697 0 -698 0 -699 0 -700 0 -701 0 -702 0 -703 0 -704 0 -705 0 -706 0 -707 0 -708 0 -709 0 -710 0 -711 0 -712 0 -713 0 -714 0 -715 0 -716 0 -717 0 -718 0 -719 0 -720 0 -721 0 -722 0 -723 0 -724 0 -725 0 -726 0 -727 0 -728 0 -729 0 -730 0 -731 0 -732 0 -733 0 -734 0 -735 0 -736 0 -737 0 -738 0 -739 0 -740 0 -741 0 -742 0 -743 0 -744 0 -745 0 -746 0 -747 0 -748 0 -749 0 -750 0 -751 0 -752 0 -753 0 -754 0 -755 0 -756 0 -757 0 -758 0 -759 0 -760 0 -761 0 -762 0 -763 0 -764 0 -765 0 -766 0 -767 0 -768 0 -769 0 -770 0 -771 0 -772 0 -773 0 -774 0 -775 0 -776 0 -777 0 -778 0 -779 0 -780 0 -781 0 -782 0 -783 0 -784 0 -785 0 -786 0 -787 0 -788 0 -789 0 -790 0 -791 0 -792 0 -793 0 -794 0 -795 0 -796 0 -797 0 -798 0 -799 0 -800 0 -801 0 -802 0 -803 0 -804 0 -805 0 -806 0 -807 0 -808 0 -809 0 -810 0 -811 0 -812 0 -813 0 -814 0 -815 0 -816 0 -817 0 -818 0 -819 0 -820 0 -821 0 -822 0 -823 0 -824 0 -825 0 -826 0 -827 0 -828 0 -829 0 -830 0 -831 0 -832 0 -833 0 -834 0 -835 0 -836 0 -837 0 -838 0 -839 0 -840 0 -841 0 -842 0 -843 0 -844 0 -845 0 -846 0 -847 0 -848 0 -849 0 -850 0 -851 0 -852 0 -853 0 -854 0 -855 0 -856 0 -857 0 -858 0 -859 0 -860 0 -861 0 -862 0 -863 0 -864 0 -865 0 -866 0 -867 0 -868 0 -869 0 -870 0 -871 0 -872 0 -873 0 -874 0 -875 0 -876 0 -877 0 -878 0 -879 0 -880 0 -881 0 -882 0 -883 0 -884 0 -885 0 -886 0 -887 0 -888 0 -889 0 -890 0 -891 0 -892 0 -893 0 -894 0 -895 0 -896 0 -897 0 -898 0 -899 0 -900 0 -901 0 -902 0 -903 0 -904 0 -905 0 -906 0 -907 0 -908 0 -909 0 -910 0 -911 0 -912 0 -913 0 -914 0 -915 0 -916 0 -917 0 -918 0 -919 0 -920 0 -921 0 -922 0 -923 0 -924 0 -925 0 -926 0 -927 0 -928 0 -929 0 -930 0 -931 0 -932 0 -933 0 -934 0 -935 0 -936 0 -937 0 -938 0 -939 0 -940 0 -941 0 -942 0 -943 0 -944 0 -945 0 -946 0 -947 0 -948 0 -949 0 -950 0 -951 0 -952 0 -953 0 -954 0 -955 0 -956 0 -957 0 -958 0 -959 0 -960 0 -961 0 -962 0 -963 0 -964 0 -965 0 -966 0 -967 0 -968 0 -969 0 -970 0 -971 0 -972 0 -973 0 -974 0 -975 0 -976 0 -977 0 -978 0 -979 0 -980 0 -981 0 -982 0 -983 0 -984 0 -985 0 -986 0 -987 0 -988 0 -989 0 -990 0 -991 0 -992 0 -993 0 -994 0 -995 0 -996 0 -997 0 -998 0 -999 0 -1000 0
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/purge_dups_01.bed Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,11 @@ +gi|568815454 1200216 1203631 JUNK +gi|568815567 1196244 1200852 JUNK +gi|568815551 1197321 1201446 JUNK +gi|568815561 1196951 1200436 JUNK +gi|568815569 1240288 1243708 JUNK +gi|568815529 1421891 1425306 JUNK +gi|568815564 1286641 1289973 JUNK +gi|568815592 29942469 29945883 JUNK +gi|342187237 5004 8419 JUNK +gi|528476637 29857558 29915771 JUNK +gi|157734152 29655295 29712160 JUNK
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/purge_dups_02.bed Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,11 @@ +gi|568815454 1200216 1203631 JUNK +gi|568815567 1196244 1200852 JUNK +gi|568815551 1197321 1201446 JUNK +gi|568815561 1196951 1200436 JUNK +gi|568815569 1240288 1243708 JUNK +gi|568815529 1421891 1425306 JUNK +gi|568815564 1286641 1289973 JUNK +gi|568815592 29942469 29945883 JUNK +gi|342187237 5004 8419 JUNK +gi|528476637 29857558 29915771 JUNK +gi|157734152 29655295 29712160 JUNK
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/purge_dups_03.bed Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,1 @@ +gi|157734152 29655294 29712160 HAPLOTIG gi|528476637
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/purge_dups_log_02.txt Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,12 @@ +tp:gi|568815454:1200216-1203631 +tp:gi|568815567:1196244-1200852 +tp:gi|568815551:1197321-1201446 +tp:gi|568815561:1196951-1200436 +tp:gi|568815569:1240288-1243708 +tp:gi|568815529:1421891-1425306 +tp:gi|568815564:1286641-1289973 +tp:gi|568815592:29942469-29945883 +tp:gi|342187237:5004-8419 +tp:gi|528476637:29857558-29915771 +tp:gi|157734152:29655295-29712160 +[M::flt_by_bm_mm] check overpuring
--- a/test-data/purge_dups_out.bed Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,11 +0,0 @@ -gi|568815454 1200216 1203631 JUNK -gi|568815567 1196244 1200852 JUNK -gi|568815551 1197321 1201446 JUNK -gi|568815561 1196951 1200436 JUNK -gi|568815569 1240288 1243708 JUNK -gi|568815529 1421891 1425306 JUNK -gi|568815564 1286641 1289973 JUNK -gi|568815592 29942469 29945883 JUNK -gi|342187237 5004 8419 JUNK -gi|528476637 29857558 29915771 JUNK -gi|157734152 29655295 29712160 JUNK
--- a/test-data/purge_dups_out_2.bed Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1 +0,0 @@ -gi|157734152 29655294 29712160 HAPLOTIG gi|528476637
--- a/test-data/purged_out.fa Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2 +0,0 @@ ->Sequence:1-608_1 -gttcgatgcc taaaatacct tcttttgtcc ctacacagac cacagttttc ctaatggctttacaccgact agaaattctt gtgcaagcac taattgaaag cggttggcct agagtgttaccggtttgtat agctgagcgc gtctcttgcc ctgatcaaag gttcattttc tctactttggaagacgttgt ggaagaatac aacaagtacg agtctctccc ccctggtttg ctgattactggatacagttg taataccctt cgcaacaccg cgtaactatc tatatgaatt attttccctttattatatgt agtaggttcg tctttaatct tcctttagca agtcttttac tgttttcgacctcaatgttc atgttcttag gttgttttgg ataatatgcg gtcagtttaa tcttcgttgtttcttcttaa aatatttatt catggtttaa tttttggttt gtacttgttc aggggccagttcattattta ctctgtttgt atacagcagt tcttttattt ttagtatgat tttaatttaaaacaattcta atggtcaaaa a
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/split_04.fasta Tue Oct 12 19:07:05 2021 +0000 @@ -0,0 +1,16 @@ +>Test_sequece_purge_dups:1-744 +ATGCCAGAGCACGTGGTCCAATGCAAGTATTGACGAGACAGCCTGTAGAGGGTAGATCGAGAGACGGTGGTTTAAGATTCGGTGAGATGGAACGTGACTGTATGATTGCTCATGGTGCTGCCTCATTCTTGAAGGAGAGATTAATGGAAGCATCCGATGCCTTTAGAGTCCATATTTGTGGTATTTGCGGGCTGATGACAGTTATCGCGAAATTAAATCATAACCAATTTGAATGTAAGGGATGTGATAATAAGATTGATATTTACCAAATTCATATTCCATACGCCGCGAAGTTATTATTCCAAGAACTTATGGCTATGAACATTACACCACGTTTATATACCGATCGTTCGAGAGATTTTTAAGAAATAATGTTGTAACTCTAAGAAAGTAAAATAATAAAAAACATTTCATTTGTGCTGATCTTGCCAAAAAAAGGGTAAACAAGTAGGCAATAGTAATAAAATAAGAATGAAGCATTTCTTTTAATAAGCAGAGAGAACTTTCAAGCATTCAAAAAACACAAAAATAATGATGAATAAAATGGGACTCACAGTGTTTATTTATAGTCCTTGTTTCGCATTTTACCAAATTAAAATTTAATTTTATCAAGACATATTAATGAACTTTAGCGGAAAACCTTAAATATCCAAGTCATAAATAATGACTTATGTAAAAAGTTATAAGAAAAATATACGGTGTTCATTTTGGAACAATGTTGCTGTTACACACTGTTAAATATAT +>Test_sequece_purge_dups:746-1078 +TAGTATTCATAAAAGAAAGAAGATTTTAATACGCGTTTTGATTAAAACTACATAACAGATAAATATATACATGGATTGAAGACTGCAAAAAGGATATATAAAAAAATGACAAATAATTTCAATAAGCTATTTCAATTGGTTAAAAATTGATTCTTTAAGAGGCTCTGGTATTGATGATTGCTCATGGGCAAAGGCAGTAATATTTTGTTTATAAGGGTTTTCACTTCCATCGAAAACTTTTAAGCGGTCTAACCGTTGCTTTCTCAATTTATTTTTAGGCAACATACCGCTAACTGCTTTTTTCAAAATTTCTCCAAATCCTTTATCGGCAAC +>Test_sequece_purge_dups:1080-1985 +ACCTTGTTCATTGTCTGTAACTTTAGCTGACCAGGTCTACCTGAATGAGACCAGTAAGTCTTCTGCTCAAATTTCTTACCTGTTACACGGATTTTTTGGCAATTAGTCACTACTACGTAGTCTCCACAGTCTTGTGACGGATGATAGACCGGCTTATGTCTACCAATTAAGGTAATTGCAATTGCTGAAGCCAATCTACCCAATGTCCTCTTATCACGGGCAACGTCGACATGGTGCCAAAGGCGCGCAAAAGCCAAGCCACTGTGTCCAATCTTCTGCGACATGAATAGGCTATTGTTGATGCTGGTATTGCTTTCTTTTTCTATATGATATCAGTGTATTCATAAGGTCTTTCTCTTTTACTTATTTAGAACGTTTTAAAGATCTCTAAACTACAAGGAAGGCTCCATGCGGGTAACAATCAACATTATAACGATAATTAACTAAACCATAACCGTCTAAGTAACCATAGCGTGCGGTGATTCTTCGCTAGATGGAACTCATGTCTTACTAGTAGCGTGTTTGGTACGTGCAATATAGAGCAAAACATTATATAGACATCGTAATAGCTTTTTATGTGCGGACTGTAATGTTTGTAAGAAGTAAAACCAGTCACTAATATAGTGAAAAAAAGTCAACTTATCGATCTATGTATCTCATAGAAGATGTATTGATTTAATATAACTTATAAAGGTGCTTCTACAGTAAGGTGCTGAGAGGACTTACTATGTCGGCAACAAGTTCAAATCTGAAGCTCTGAGGATTTCGCGAGATGCGCACAATCTGAAGTAATATAAAGATGAAAACACAATACAAAAGGCCTGAAAATCTATATGTCCGATAAGATATCATAGTATTCTTACTCGCAAGCACACATCAGGTACTTGGAAGTGTATGATGAGGTAT +>Test_sequece_purge_dups:1987-3249 +AATGGTGGCTTTATTTAGTATATGCCATCGGCCTAATGCTATGCCTAGGCCCGTCGTATATTCATCCAGATGAACATTTCCAATGCATCGAGATTTTGGCTATGCAGTTCATGAAGGTCAAAGGTACCATCCCATGGGAATTTAAATCAAAATTTGCTGCTAGGAGTTACGGCCCCCTATTATTGGTTTACGGGCCTTTGTTCACTATTTTAGAATCTTTTCCCCGAAATTCAGGACAACCCAGCGTTAATTCTGTATTCGATGAGACTACAAAACTATGTGATGTACCTATTGTGCTATCATTTTTTAATACCTAAATTAATAAGGGATGAGAGAAAGGCCGTACAATTCATCAAAAAAAGTCTACTTTTAACTTCTTACGTAACCTGGACGTACCAAACACACACGTTTTCCAATTCCATAGAAACGCTGGCTTTAATCTCAACTTTAACTGTAATGGAAGATATGGTAAACGAAAAAAATATTCAAAGAAGTAATTTCAAAAATTCGGTTATATTGGGACTTATATTTAGTTTTGGTGTTTTTAATAGAGTTACTTTTCCTGCATTTATTTTCTTACCATGTTTGATATTATTCTGGAAGTTTTACCGGGTCCATTGGAAATCCTTTTCTTTACTTTTACTTTCATTTTCATTTTCCTCGTGTCTATTTGTTCTTATTGATACAAATATTTATAACAACGGAAAGGGATTTGTCATTACGCCCTTGAATAACCTGAAATACAACCTCAATGTCCAAAATTTGCAAGTACATGGATTACATCCAAGATACACCCATCTGCTGGTCAATTTACCTCAAATAGTTGGCCCAGTATTGCTGCTAGCGATTTTTTCCGGTTACAAACTCGATAAATTATCTACTTACGCAATCATATCTGGCCTGCTTTTTCTTTCATTCTTTCAACATCAAGAATTAAGATTCCTTGTACCGCTAGTGCCACTACTCGTGACAAACTTAAACTGGACACCTCTGAGTTCCACGTTAGTAAACAAGAAAATTTTCAAGGGAACTTGGCTTCTTTTTAACATAATCATGGCGTTCATCATGGGAATTTCACATCAAGCAGGAATTATCCAATTTTTGGGAGATTACTTCCACTTTCGTACCGAACAAATGGGCGTTCACATATGGTGGAAAACATACTCACCACCCACCTGGATGTATATGAGCAATAACCTAACCGTTTCTTCTCTTATCAATACACAGGATGGTATTGAGTCGATAGATGAAGTGGCATTCAGT +>Test_sequece_purge_dups:3251-5412 +TAGGTAACCATCATGTAATAGACCTTAAAGGCTGTGATTTACCACTTTTAACAGAAACAATTAGGCGGCTGCGTTTAAACGGGTCCATAACTCCACTAACTTTAGTAACTCCCAATTCCATGACATCAGAATTGAAAAAGTTGAAGAGAGATGGCACTATTAACTTAATACCCAAAAGAAATTACTTGTTCCATTTGGATTTGGATCATCTTGATTTCAATGATTTCACGACTTTTAAGCCAGGGCTAACAGTGTACTCCATCGAACTACTATAAGACCAGCTATATGAGGAGTTATGCATATATTATGGCTGTGAATTTAAGTTTAAATGATCTTATCCTAGGTATTCTTATAAAAAAGAAGAGTGCTTTAATCGAGCAATGGTTAACTATTTGTTGCATACTCATTTTTTCCCATTGAAATCTCTAATTGTAGGCTGATACAAACTCGGTACTCAGCTCAAGATAGGATTGTTAGTTCTGATATGCAATCTTATTAATCTATGTATAGTACACAACTGTATGAAAACCTCCCGAAGTCTAAGTAAAGCTCCATTGATGTTCTCTTGCTGTTAAGTATTATATTACTCCATAACCAAATCTGTGTTCACACGTACTACAAGCTTGACATGATACTGACCATAGTACATGTGCAAGTTATTCAAACTAAGAATTACAGAGCTTCATTTGTCACAGTCACTTCATACTACTATGCTTCTAATGCTTCTAATATTTATGCATTGCAGGTTCAACATGCAACACTTGGGTTCTCAATGATCTGGCGCTATCATTTGTTACCCGACCGTGCGTAGAAAAAAATGTAAAAATATAGGAATAGCTGTTTTAAGTTATTAAGGTAATAATGCACGTCGAGCGATGGTAGGTAAAATGTCTAGAGGCATATCTAGGATGTAGAATGAGCAAGTTTTCACTTAAGTTGGGGAGTAAGACCTTGAAAAAAAATATTTCCAAGAAGACGAAAAAAAAAAACTCATTACAGAAGGCCAACTTATTCGATTGGGATGATGCGGAAACTGCAAGCCTTTCGCATAAACCTCAAAGTAAGATAAAGATTCAAAGTATTGATAAATTCGATCTTGATGAAGAATCATCTTCTAAGAAGAAATTAGTGATCAAGCTGAGTGAAAATGCGGATACCAAAAAAAACGATGCTCCTCTGGTGGAATATGTCACCGAAAAAGAATATAATGAGGTACCTGTCGAGGAATTTGGAGATGCTTTACTTCGGGGTATGGGGTGGGAAAGTGACTCCGAGCAAGATTCTAAAGGCGACAAGACACAGAGTCGAAACAAGGACGTTTCAAATGTTTCACAGATACATCCTGATGGACTGGGAATTGGTGCCAAGTTAAATAAGGCAATAAACGTGGAGGAGGCTTCATTTATGCCCGTCGTAAAAATCGATAAAATAACGGGCACTAAAGTTGATGACGACAAAAAAAATAAGTCATGAGAAAGTTTGAATATATAATTTAAAGTACTTGGTATATACACATTATATTTTATGCATGTTCCGAAGGAGGTATTTTTAGTTTGGCTTTTTTTTCTTATTTTTTCTTCAATTTACTTGATAAATGAAATGCAAGGAAGTTCAGTTTGATATTATATAAGCAATAGTCAAACCATGGCACCAAACCCAAACAACAATAATTGGGATGCAAAGGTAGTACCCCATTGTTTCATCCAATCATTTTTGTTTTTAAACTCCCAATCTTCTACTATTTTGGTTAAATCAACATATAGCTCCATGGTAATTTGGTCTAGTATTTGATTAATGTTAATAAGCTGTAAATCTGACAAGTTTTTGACCATCTTACAGCGTAAAACAATTTCGTTTGCATTAGTATTTGGTTGATTATGAAACTTGATGATTTCCTTCGTGGAATTGGAAGTGACTTTTGTAGTTAAAGGATAAGATTTCCTTTGCCTATTAATCGATACATTTGGCGAGTTCCAGATTATGGAATTGGTCAATCTCTCGTTTTCCGAGAAATCTTTCAATATAGGATTAGCCATCCCTTCATATGAGTTAATAAATGTTATTATAGGTTTCAATTCATCCAATGAAACAATACTGTCACCTGTCGATAATACTGGAGGTTCCTGAGGGAAAGTTGTCTTCAAGTCCCTACAAGTTACCTT +>Test_sequece_purge_dups:5414-7266 +AAATCCACCACTGCATATTTCGACTCCGATGATAGATGAGAAGTAGAATTTGTTAGCATTATGTCAGCAAGTATTTCAACTTGGCCGTCTTTCAACCAGTTGAACTTACCATCGCCATTAAATTTTAAATCATTAATGTTGATAAAGTTCAATCTTAACGTCGTTACATAATTCGGATCATCCTGATGAGTCACTGTGCGGTAATTTTCCTGATTGTTGTCCGTGAAATCAAACTTCGAGCTTGCCATCCTATTTTTGTTATTATTTTCAATAACTGCTGTTAACTTTTGTTGCCTCTTAAATAAGTTGAAAAGAGAATTATTAATTGAACCAGAAAATGTTTTGGCACTCAGAATATCAGAAATAAAATGGTTCAGTCTTAGTCGTGGTAAAGATAGATTGTAAATGGAAAATTTTAGACTCGGAGTTTCCTGGGCACTCAGAGATTGTTTCAAAAGAATTTCTGAGTCAGTAATTTCAACGTTATTTAAAGTTTTCAAAAAATTCTCCGTCTTTTGATCTCCTTGAAAAGAGTTTACTAAATTGATGAAATTGGATAAGTTCAAACATCCTCTAATACCGTATATTGAAACATTTGTAATTAGTCCCCTGCCAAGTAACCAATTTTTTAGGGAAACATTCAGGTTAATGTGGTGAAATTTTAAGTCTAAGTCCAAAATCTCATCCCTGACATTTAGCCTTTTTATAAGTATTGAATTTGACTCCCAGTCTGGAGAGAGCACAAGCATTGATGCTTTATCTTCCGGAGAAAATGTGATTTCCAAATCTTGATTGGAGCACTTATGATCTTTCAACAACCATTTTAGAAGCCTTTCATAGATTTTCTTCTCATGGATGTATTCCTGACTGAAAACAGAGTTAATGACGAATAGATAGAACGAAATGAAAGTGGTGGTGCTCAGAATGAGCCATAGAATTTGTGACAATATCAGCCAAGACGCTATAATACTTATTTCATTCAGAGAGAACGGCCTGTTGTTTTTAATAAGAATCCACTTTAGATTGATTTTGAACCTTTCTTGAAAATTCTTTGCATCTGCTAGAAGCGATTGCTTGAACTCTCGCTCATTATTTTTTCTCAGCAAAATAGTCTCAATATTGGAAGCCTTGGTAGTGAACTTGTCATTGCTTGGAAATGTTCGGATGTGCCTTTGGGCGATCAAACATCTAACAGGTAACGAACTCTTGTAAGGTGTTATAAAAGGTCTGACATTTCCATGATTAGTTGCGACGTAAGTTCGAATACAGTGTCTTACGAGATGACTTGTAATTGGAAGCAGTGGCCGCTTTATTGTAGGGACCCGTAAACGTGTGATTAGCATGAATTTTATAAACCTCCCACCACCTGATAATCTGTATGTGCCTTTTGTTTTAATACTTCTTGACGCAAATCTACTGTCAACTTTAATATGCATCCCTCCATAGTAAGTCAAGGATCAGCTAGAACCAATAACGAGAAGTAAAAAAAAGTGACAAAAAGTCAAATGTGTCTTTATACGAATTTTTTAACCTACATATGAAGAGTAAGGTCATAAATAATAAATGTAGGGCTAAATGCAGTTAAGATTACTACAGTATTAGGTCTGTTTTTTATCACCTCTTACGGAAAGTGCGAGCGGGAAAAAATTTTTCTTCTTTCCTTATTATCATACCGATGCTCATCACAATGAAAGATACATATTGCATCAATAATAGGCAGTTTTCAATATTCTTCTGTTTAGTTAAGAAAAAGACTTGAAGTGAAAATAAACTACATTATGGTTGCGCCTACTGCTTTGAAAAAGGCTACTGTGACACCTGTAAGTGGACAAGATGGGGGCAGTAGTAGAATT +>Test_sequece_purge_dups:7268-9120 +TAGGAATAAATAATACCGAAAGCATCGATGAGGACGATGATGACGACGTTCTGTTAGATGATTCCGACAATAACACAGCAAAAGAAGAGGTAGAGGGCGAAGAAGGTAGCCGGAAAACGCACGAATCTAAGACCGTAGTGGTTGATGACCAGGGGAAACCTCGCTTCACTTCAGCTAGCAAAACACAGGGTAACAAAATAAAATTTGAATCGAGAAAGATCATGGTTCCACCACACAGAATGACACCCTTGAGGAACAGTTGGACAAAAATTTATCCTCCTTTGGTCGAGCACTTGAAGCTGCAAGTCAGAATGAATTTAAAGACCAAATCCGTAGAACTAAGAACGAATCCTAAATTTACCACAGACCCTGGTGCGTTGCAAAAAGGGGCCGATTTTATCAAAGCCTTTACCTTAGGGTTTGATCTTGACGATTCTATCGCACTATTGAGGCTAGATGATTTATATATTGAGACTTTTGAAGTCAAAGATGTCAAGACTCTAACAGGTGACCATTTGTCGAGAGCCATCGGTCGTATTGCCGGTAAAGACGGTAAAACGAAATTTGCGATTGAAAACGCTACAAGAACAAGAATTGTCTTAGCTGACTCTAAAATCCACATTTTGGGCGGGTTCACCCACATCAGAATGGCAAGAGAATCTGTGGTTAGTTTAATTTTGGGTTCCCCTCCAGGTAAAGTTTATGGGAACTTACGTACCGTTGCATCTAGATTAAAAGAACGCTACTAAACATAATTTGTGGGCTTTCATCATCTGTATAATATTTATATGTCGTTTTATGGCGAAATAGAGTGAATAAATAGGTTTTTTTTTCCTTCTTTTTTTTAGGACGCCAAACGCGTAACGTTAGCGGTGATAAATTAGTTTAGTATTATTATCCGGCTATTTGCTTCATGTATTTAACGTCTTCACTGACCACCTTCGCTGCACTAAATCGTATGGTACCATAGCATTAATCTTTTTGAATCAGAGAAGGTTTTCCAATGAAAAGGCACGTGTCTTTATCTGATATATTGACAGGAAATAAGAGAAAAGTGAGAAGACAAGATGCTCTACAGATTACCATCGATGACGAAAATGATACTGAATCAGGCACTTTTGACGCCAGAACAGCCAAACATGACGATTCTTCAGTAATATTTTTAAACCACTCTGTTGTGAAGCCAATTGAAGCTGTTTCTACTAATCACAAATCTGCAAAGGAGTTTTTGATGACGAAACGCACAAAAGAAAAATGCGATGACGACGATGATGATCTTATTGTAATCAGTGATAAGAGTCCCAAAAGTGAGACTAATTGTAGCAAAATTGCACTTTCGCAGGAGCATGAAGATGATATTTCTATAATTTCCACATCGAGAATCAAATCATCGCTTCTTAATGAAAGAGCATCAAAGATTAAAAACTTCCTTAAACATGAGACAACCGACACGTTCAAAAGATTAAATAGCATCTCTAAACTAAATGAAATAGAGCCACCATTACCATTACATCAATCGATTTTCCCAGTAGGTGACAAAGAGCTGTCAGATCGGAGTGTTGATATCCCGCTTCCTTTCCGCACAATACCGCCATTAAATCATAATTTTCTTCCTAGTGACTATGAATCGTTGAAAGACAAGAATTCAGCATCTTGTATTCCTGTTCGCTATCAAGCACCGGTATTACTTGGCACAAATATTAAAAGAAATACAACTCTCACATGGCCGCAGCTATTCAAGCCTGTCACTTTAAAACAAGTATTAATTGAACCCAAATTGAAACTTCGAATCAAAAATTGGATTGAAACATCCTTTCATACGCTAGAAAAGCCTACCTTGAGGAACCGTCTAT +>Test_sequece_purge_dups:9122-10180 +GAACAGAATAAATCCCAATAAACAACAGGGATCTGGTGATGAGCTTGCCAACTTCATTGTACCTGATCTCGAAGAAGACGAAAACTTGCGTCCAGATTTCTACAGAAATGGCGAAGCAAATAGCAGCTTGAGCGAATTTGTTCCACTAATGATATTACACGGAAATTCAATAGGCAAGAAAACGCTGATACAGACAATCATGAGAGAGATTGCTGGCGACGATAATTCTTACCAGATATATGAAGTTAATTCAAACATGAACAGGAGCAAAAAAGATTTGCTTGATATCCTACTAGATTTTACCACCACACACTATGTCAAAGATTCCTCAAAAAGGAAAAGTGACTACGGGCTTGTTTTATTTAATGATGTTGATGTTTTATTTAAAGAACATGATAGGGGATATTGGGCAATGATCAGCAAGCTTTGTGAATTTTCACGAAGGCCCCTCGTATTGACTTGTAAGGATTTGTCACTAGTTCCTAGTGAACTTATTGCCTTGGCAAGTGAACAAAACTCTTTGTTTCATACTAAGAAAATTAGTACATCCACAGTCTATGCGTTTCTAACAAAATATTTAAAGTCCCTTGAAATCGAAGTTTGTGACGACTGGCTTCGCGATGTTGTAAAACAAAATAATGCGGATATTAGGAAGTGCTTGATGCACTTGCAGTTTTGGTGCGTTGATACTGGGGCTGATTTGATTTCATCCAAGAACAGACTACCGGTCCTAACATCAACTCTTGGTTCAAGCGTTAAAGATATATCGCAATTAACTGATCTACTCTCCATAAATGATGTTATTGGTCAAGCAACGCTCAATCGTTCCATGGTTAGACAAGAAATAGATTCTACCACAATGACCCCAGAAAAAGTTAATACTTTCCAGGATCAAAATCTGGATGATGAAATGAAATTAAAATTTGATTACGTGATAGATTATAAATTGCATTTAAATGACCCCAATAGACAACCATTATTACCCTTTGAATTGAATATTTACCAACACATCCAAGAACAATTGGAAGCTCGGTATTCCTATGTTAGAGAAGCAAACCA
--- a/test-data/split_out.fasta Mon Jun 14 18:01:05 2021 +0000 +++ b/test-data/split_out.fasta Tue Oct 12 19:07:05 2021 +0000 @@ -1,2 +1,16 @@ ->Sequence:1-608 -gttcgatgcc taaaatacct tcttttgtcc ctacacagac cacagttttc ctaatggctttacaccgact agaaattctt gtgcaagcac taattgaaag cggttggcct agagtgttaccggtttgtat agctgagcgc gtctcttgcc ctgatcaaag gttcattttc tctactttggaagacgttgt ggaagaatac aacaagtacg agtctctccc ccctggtttg ctgattactggatacagttg taataccctt cgcaacaccg cgtaactatc tatatgaatt attttccctttattatatgt agtaggttcg tctttaatct tcctttagca agtcttttac tgttttcgacctcaatgttc atgttcttag gttgttttgg ataatatgcg gtcagtttaa tcttcgttgtttcttcttaa aatatttatt catggtttaa tttttggttt gtacttgttc aggggccagttcattattta ctctgtttgt atacagcagt tcttttattt ttagtatgat tttaatttaaaacaattcta atggtcaaaa a +>Test_sequece_purge_dups:1-744 +ATGCCAGAGCACGTGGTCCAATGCAAGTATTGACGAGACAGCCTGTAGAGGGTAGATCGAGAGACGGTGGTTTAAGATTCGGTGAGATGGAACGTGACTGTATGATTGCTCATGGTGCTGCCTCATTCTTGAAGGAGAGATTAATGGAAGCATCCGATGCCTTTAGAGTCCATATTTGTGGTATTTGCGGGCTGATGACAGTTATCGCGAAATTAAATCATAACCAATTTGAATGTAAGGGATGTGATAATAAGATTGATATTTACCAAATTCATATTCCATACGCCGCGAAGTTATTATTCCAAGAACTTATGGCTATGAACATTACACCACGTTTATATACCGATCGTTCGAGAGATTTTTAAGAAATAATGTTGTAACTCTAAGAAAGTAAAATAATAAAAAACATTTCATTTGTGCTGATCTTGCCAAAAAAAGGGTAAACAAGTAGGCAATAGTAATAAAATAAGAATGAAGCATTTCTTTTAATAAGCAGAGAGAACTTTCAAGCATTCAAAAAACACAAAAATAATGATGAATAAAATGGGACTCACAGTGTTTATTTATAGTCCTTGTTTCGCATTTTACCAAATTAAAATTTAATTTTATCAAGACATATTAATGAACTTTAGCGGAAAACCTTAAATATCCAAGTCATAAATAATGACTTATGTAAAAAGTTATAAGAAAAATATACGGTGTTCATTTTGGAACAATGTTGCTGTTACACACTGTTAAATATAT +>Test_sequece_purge_dups:746-1078 +TAGTATTCATAAAAGAAAGAAGATTTTAATACGCGTTTTGATTAAAACTACATAACAGATAAATATATACATGGATTGAAGACTGCAAAAAGGATATATAAAAAAATGACAAATAATTTCAATAAGCTATTTCAATTGGTTAAAAATTGATTCTTTAAGAGGCTCTGGTATTGATGATTGCTCATGGGCAAAGGCAGTAATATTTTGTTTATAAGGGTTTTCACTTCCATCGAAAACTTTTAAGCGGTCTAACCGTTGCTTTCTCAATTTATTTTTAGGCAACATACCGCTAACTGCTTTTTTCAAAATTTCTCCAAATCCTTTATCGGCAAC +>Test_sequece_purge_dups:1080-1985 +ACCTTGTTCATTGTCTGTAACTTTAGCTGACCAGGTCTACCTGAATGAGACCAGTAAGTCTTCTGCTCAAATTTCTTACCTGTTACACGGATTTTTTGGCAATTAGTCACTACTACGTAGTCTCCACAGTCTTGTGACGGATGATAGACCGGCTTATGTCTACCAATTAAGGTAATTGCAATTGCTGAAGCCAATCTACCCAATGTCCTCTTATCACGGGCAACGTCGACATGGTGCCAAAGGCGCGCAAAAGCCAAGCCACTGTGTCCAATCTTCTGCGACATGAATAGGCTATTGTTGATGCTGGTATTGCTTTCTTTTTCTATATGATATCAGTGTATTCATAAGGTCTTTCTCTTTTACTTATTTAGAACGTTTTAAAGATCTCTAAACTACAAGGAAGGCTCCATGCGGGTAACAATCAACATTATAACGATAATTAACTAAACCATAACCGTCTAAGTAACCATAGCGTGCGGTGATTCTTCGCTAGATGGAACTCATGTCTTACTAGTAGCGTGTTTGGTACGTGCAATATAGAGCAAAACATTATATAGACATCGTAATAGCTTTTTATGTGCGGACTGTAATGTTTGTAAGAAGTAAAACCAGTCACTAATATAGTGAAAAAAAGTCAACTTATCGATCTATGTATCTCATAGAAGATGTATTGATTTAATATAACTTATAAAGGTGCTTCTACAGTAAGGTGCTGAGAGGACTTACTATGTCGGCAACAAGTTCAAATCTGAAGCTCTGAGGATTTCGCGAGATGCGCACAATCTGAAGTAATATAAAGATGAAAACACAATACAAAAGGCCTGAAAATCTATATGTCCGATAAGATATCATAGTATTCTTACTCGCAAGCACACATCAGGTACTTGGAAGTGTATGATGAGGTAT +>Test_sequece_purge_dups:1987-3249 +AATGGTGGCTTTATTTAGTATATGCCATCGGCCTAATGCTATGCCTAGGCCCGTCGTATATTCATCCAGATGAACATTTCCAATGCATCGAGATTTTGGCTATGCAGTTCATGAAGGTCAAAGGTACCATCCCATGGGAATTTAAATCAAAATTTGCTGCTAGGAGTTACGGCCCCCTATTATTGGTTTACGGGCCTTTGTTCACTATTTTAGAATCTTTTCCCCGAAATTCAGGACAACCCAGCGTTAATTCTGTATTCGATGAGACTACAAAACTATGTGATGTACCTATTGTGCTATCATTTTTTAATACCTAAATTAATAAGGGATGAGAGAAAGGCCGTACAATTCATCAAAAAAAGTCTACTTTTAACTTCTTACGTAACCTGGACGTACCAAACACACACGTTTTCCAATTCCATAGAAACGCTGGCTTTAATCTCAACTTTAACTGTAATGGAAGATATGGTAAACGAAAAAAATATTCAAAGAAGTAATTTCAAAAATTCGGTTATATTGGGACTTATATTTAGTTTTGGTGTTTTTAATAGAGTTACTTTTCCTGCATTTATTTTCTTACCATGTTTGATATTATTCTGGAAGTTTTACCGGGTCCATTGGAAATCCTTTTCTTTACTTTTACTTTCATTTTCATTTTCCTCGTGTCTATTTGTTCTTATTGATACAAATATTTATAACAACGGAAAGGGATTTGTCATTACGCCCTTGAATAACCTGAAATACAACCTCAATGTCCAAAATTTGCAAGTACATGGATTACATCCAAGATACACCCATCTGCTGGTCAATTTACCTCAAATAGTTGGCCCAGTATTGCTGCTAGCGATTTTTTCCGGTTACAAACTCGATAAATTATCTACTTACGCAATCATATCTGGCCTGCTTTTTCTTTCATTCTTTCAACATCAAGAATTAAGATTCCTTGTACCGCTAGTGCCACTACTCGTGACAAACTTAAACTGGACACCTCTGAGTTCCACGTTAGTAAACAAGAAAATTTTCAAGGGAACTTGGCTTCTTTTTAACATAATCATGGCGTTCATCATGGGAATTTCACATCAAGCAGGAATTATCCAATTTTTGGGAGATTACTTCCACTTTCGTACCGAACAAATGGGCGTTCACATATGGTGGAAAACATACTCACCACCCACCTGGATGTATATGAGCAATAACCTAACCGTTTCTTCTCTTATCAATACACAGGATGGTATTGAGTCGATAGATGAAGTGGCATTCAGT +>Test_sequece_purge_dups:3251-5412 +TAGGTAACCATCATGTAATAGACCTTAAAGGCTGTGATTTACCACTTTTAACAGAAACAATTAGGCGGCTGCGTTTAAACGGGTCCATAACTCCACTAACTTTAGTAACTCCCAATTCCATGACATCAGAATTGAAAAAGTTGAAGAGAGATGGCACTATTAACTTAATACCCAAAAGAAATTACTTGTTCCATTTGGATTTGGATCATCTTGATTTCAATGATTTCACGACTTTTAAGCCAGGGCTAACAGTGTACTCCATCGAACTACTATAAGACCAGCTATATGAGGAGTTATGCATATATTATGGCTGTGAATTTAAGTTTAAATGATCTTATCCTAGGTATTCTTATAAAAAAGAAGAGTGCTTTAATCGAGCAATGGTTAACTATTTGTTGCATACTCATTTTTTCCCATTGAAATCTCTAATTGTAGGCTGATACAAACTCGGTACTCAGCTCAAGATAGGATTGTTAGTTCTGATATGCAATCTTATTAATCTATGTATAGTACACAACTGTATGAAAACCTCCCGAAGTCTAAGTAAAGCTCCATTGATGTTCTCTTGCTGTTAAGTATTATATTACTCCATAACCAAATCTGTGTTCACACGTACTACAAGCTTGACATGATACTGACCATAGTACATGTGCAAGTTATTCAAACTAAGAATTACAGAGCTTCATTTGTCACAGTCACTTCATACTACTATGCTTCTAATGCTTCTAATATTTATGCATTGCAGGTTCAACATGCAACACTTGGGTTCTCAATGATCTGGCGCTATCATTTGTTACCCGACCGTGCGTAGAAAAAAATGTAAAAATATAGGAATAGCTGTTTTAAGTTATTAAGGTAATAATGCACGTCGAGCGATGGTAGGTAAAATGTCTAGAGGCATATCTAGGATGTAGAATGAGCAAGTTTTCACTTAAGTTGGGGAGTAAGACCTTGAAAAAAAATATTTCCAAGAAGACGAAAAAAAAAAACTCATTACAGAAGGCCAACTTATTCGATTGGGATGATGCGGAAACTGCAAGCCTTTCGCATAAACCTCAAAGTAAGATAAAGATTCAAAGTATTGATAAATTCGATCTTGATGAAGAATCATCTTCTAAGAAGAAATTAGTGATCAAGCTGAGTGAAAATGCGGATACCAAAAAAAACGATGCTCCTCTGGTGGAATATGTCACCGAAAAAGAATATAATGAGGTACCTGTCGAGGAATTTGGAGATGCTTTACTTCGGGGTATGGGGTGGGAAAGTGACTCCGAGCAAGATTCTAAAGGCGACAAGACACAGAGTCGAAACAAGGACGTTTCAAATGTTTCACAGATACATCCTGATGGACTGGGAATTGGTGCCAAGTTAAATAAGGCAATAAACGTGGAGGAGGCTTCATTTATGCCCGTCGTAAAAATCGATAAAATAACGGGCACTAAAGTTGATGACGACAAAAAAAATAAGTCATGAGAAAGTTTGAATATATAATTTAAAGTACTTGGTATATACACATTATATTTTATGCATGTTCCGAAGGAGGTATTTTTAGTTTGGCTTTTTTTTCTTATTTTTTCTTCAATTTACTTGATAAATGAAATGCAAGGAAGTTCAGTTTGATATTATATAAGCAATAGTCAAACCATGGCACCAAACCCAAACAACAATAATTGGGATGCAAAGGTAGTACCCCATTGTTTCATCCAATCATTTTTGTTTTTAAACTCCCAATCTTCTACTATTTTGGTTAAATCAACATATAGCTCCATGGTAATTTGGTCTAGTATTTGATTAATGTTAATAAGCTGTAAATCTGACAAGTTTTTGACCATCTTACAGCGTAAAACAATTTCGTTTGCATTAGTATTTGGTTGATTATGAAACTTGATGATTTCCTTCGTGGAATTGGAAGTGACTTTTGTAGTTAAAGGATAAGATTTCCTTTGCCTATTAATCGATACATTTGGCGAGTTCCAGATTATGGAATTGGTCAATCTCTCGTTTTCCGAGAAATCTTTCAATATAGGATTAGCCATCCCTTCATATGAGTTAATAAATGTTATTATAGGTTTCAATTCATCCAATGAAACAATACTGTCACCTGTCGATAATACTGGAGGTTCCTGAGGGAAAGTTGTCTTCAAGTCCCTACAAGTTACCTT +>Test_sequece_purge_dups:5414-7266 +AAATCCACCACTGCATATTTCGACTCCGATGATAGATGAGAAGTAGAATTTGTTAGCATTATGTCAGCAAGTATTTCAACTTGGCCGTCTTTCAACCAGTTGAACTTACCATCGCCATTAAATTTTAAATCATTAATGTTGATAAAGTTCAATCTTAACGTCGTTACATAATTCGGATCATCCTGATGAGTCACTGTGCGGTAATTTTCCTGATTGTTGTCCGTGAAATCAAACTTCGAGCTTGCCATCCTATTTTTGTTATTATTTTCAATAACTGCTGTTAACTTTTGTTGCCTCTTAAATAAGTTGAAAAGAGAATTATTAATTGAACCAGAAAATGTTTTGGCACTCAGAATATCAGAAATAAAATGGTTCAGTCTTAGTCGTGGTAAAGATAGATTGTAAATGGAAAATTTTAGACTCGGAGTTTCCTGGGCACTCAGAGATTGTTTCAAAAGAATTTCTGAGTCAGTAATTTCAACGTTATTTAAAGTTTTCAAAAAATTCTCCGTCTTTTGATCTCCTTGAAAAGAGTTTACTAAATTGATGAAATTGGATAAGTTCAAACATCCTCTAATACCGTATATTGAAACATTTGTAATTAGTCCCCTGCCAAGTAACCAATTTTTTAGGGAAACATTCAGGTTAATGTGGTGAAATTTTAAGTCTAAGTCCAAAATCTCATCCCTGACATTTAGCCTTTTTATAAGTATTGAATTTGACTCCCAGTCTGGAGAGAGCACAAGCATTGATGCTTTATCTTCCGGAGAAAATGTGATTTCCAAATCTTGATTGGAGCACTTATGATCTTTCAACAACCATTTTAGAAGCCTTTCATAGATTTTCTTCTCATGGATGTATTCCTGACTGAAAACAGAGTTAATGACGAATAGATAGAACGAAATGAAAGTGGTGGTGCTCAGAATGAGCCATAGAATTTGTGACAATATCAGCCAAGACGCTATAATACTTATTTCATTCAGAGAGAACGGCCTGTTGTTTTTAATAAGAATCCACTTTAGATTGATTTTGAACCTTTCTTGAAAATTCTTTGCATCTGCTAGAAGCGATTGCTTGAACTCTCGCTCATTATTTTTTCTCAGCAAAATAGTCTCAATATTGGAAGCCTTGGTAGTGAACTTGTCATTGCTTGGAAATGTTCGGATGTGCCTTTGGGCGATCAAACATCTAACAGGTAACGAACTCTTGTAAGGTGTTATAAAAGGTCTGACATTTCCATGATTAGTTGCGACGTAAGTTCGAATACAGTGTCTTACGAGATGACTTGTAATTGGAAGCAGTGGCCGCTTTATTGTAGGGACCCGTAAACGTGTGATTAGCATGAATTTTATAAACCTCCCACCACCTGATAATCTGTATGTGCCTTTTGTTTTAATACTTCTTGACGCAAATCTACTGTCAACTTTAATATGCATCCCTCCATAGTAAGTCAAGGATCAGCTAGAACCAATAACGAGAAGTAAAAAAAAGTGACAAAAAGTCAAATGTGTCTTTATACGAATTTTTTAACCTACATATGAAGAGTAAGGTCATAAATAATAAATGTAGGGCTAAATGCAGTTAAGATTACTACAGTATTAGGTCTGTTTTTTATCACCTCTTACGGAAAGTGCGAGCGGGAAAAAATTTTTCTTCTTTCCTTATTATCATACCGATGCTCATCACAATGAAAGATACATATTGCATCAATAATAGGCAGTTTTCAATATTCTTCTGTTTAGTTAAGAAAAAGACTTGAAGTGAAAATAAACTACATTATGGTTGCGCCTACTGCTTTGAAAAAGGCTACTGTGACACCTGTAAGTGGACAAGATGGGGGCAGTAGTAGAATT +>Test_sequece_purge_dups:7268-9120 +TAGGAATAAATAATACCGAAAGCATCGATGAGGACGATGATGACGACGTTCTGTTAGATGATTCCGACAATAACACAGCAAAAGAAGAGGTAGAGGGCGAAGAAGGTAGCCGGAAAACGCACGAATCTAAGACCGTAGTGGTTGATGACCAGGGGAAACCTCGCTTCACTTCAGCTAGCAAAACACAGGGTAACAAAATAAAATTTGAATCGAGAAAGATCATGGTTCCACCACACAGAATGACACCCTTGAGGAACAGTTGGACAAAAATTTATCCTCCTTTGGTCGAGCACTTGAAGCTGCAAGTCAGAATGAATTTAAAGACCAAATCCGTAGAACTAAGAACGAATCCTAAATTTACCACAGACCCTGGTGCGTTGCAAAAAGGGGCCGATTTTATCAAAGCCTTTACCTTAGGGTTTGATCTTGACGATTCTATCGCACTATTGAGGCTAGATGATTTATATATTGAGACTTTTGAAGTCAAAGATGTCAAGACTCTAACAGGTGACCATTTGTCGAGAGCCATCGGTCGTATTGCCGGTAAAGACGGTAAAACGAAATTTGCGATTGAAAACGCTACAAGAACAAGAATTGTCTTAGCTGACTCTAAAATCCACATTTTGGGCGGGTTCACCCACATCAGAATGGCAAGAGAATCTGTGGTTAGTTTAATTTTGGGTTCCCCTCCAGGTAAAGTTTATGGGAACTTACGTACCGTTGCATCTAGATTAAAAGAACGCTACTAAACATAATTTGTGGGCTTTCATCATCTGTATAATATTTATATGTCGTTTTATGGCGAAATAGAGTGAATAAATAGGTTTTTTTTTCCTTCTTTTTTTTAGGACGCCAAACGCGTAACGTTAGCGGTGATAAATTAGTTTAGTATTATTATCCGGCTATTTGCTTCATGTATTTAACGTCTTCACTGACCACCTTCGCTGCACTAAATCGTATGGTACCATAGCATTAATCTTTTTGAATCAGAGAAGGTTTTCCAATGAAAAGGCACGTGTCTTTATCTGATATATTGACAGGAAATAAGAGAAAAGTGAGAAGACAAGATGCTCTACAGATTACCATCGATGACGAAAATGATACTGAATCAGGCACTTTTGACGCCAGAACAGCCAAACATGACGATTCTTCAGTAATATTTTTAAACCACTCTGTTGTGAAGCCAATTGAAGCTGTTTCTACTAATCACAAATCTGCAAAGGAGTTTTTGATGACGAAACGCACAAAAGAAAAATGCGATGACGACGATGATGATCTTATTGTAATCAGTGATAAGAGTCCCAAAAGTGAGACTAATTGTAGCAAAATTGCACTTTCGCAGGAGCATGAAGATGATATTTCTATAATTTCCACATCGAGAATCAAATCATCGCTTCTTAATGAAAGAGCATCAAAGATTAAAAACTTCCTTAAACATGAGACAACCGACACGTTCAAAAGATTAAATAGCATCTCTAAACTAAATGAAATAGAGCCACCATTACCATTACATCAATCGATTTTCCCAGTAGGTGACAAAGAGCTGTCAGATCGGAGTGTTGATATCCCGCTTCCTTTCCGCACAATACCGCCATTAAATCATAATTTTCTTCCTAGTGACTATGAATCGTTGAAAGACAAGAATTCAGCATCTTGTATTCCTGTTCGCTATCAAGCACCGGTATTACTTGGCACAAATATTAAAAGAAATACAACTCTCACATGGCCGCAGCTATTCAAGCCTGTCACTTTAAAACAAGTATTAATTGAACCCAAATTGAAACTTCGAATCAAAAATTGGATTGAAACATCCTTTCATACGCTAGAAAAGCCTACCTTGAGGAACCGTCTAT +>Test_sequece_purge_dups:9122-10180 +GAACAGAATAAATCCCAATAAACAACAGGGATCTGGTGATGAGCTTGCCAACTTCATTGTACCTGATCTCGAAGAAGACGAAAACTTGCGTCCAGATTTCTACAGAAATGGCGAAGCAAATAGCAGCTTGAGCGAATTTGTTCCACTAATGATATTACACGGAAATTCAATAGGCAAGAAAACGCTGATACAGACAATCATGAGAGAGATTGCTGGCGACGATAATTCTTACCAGATATATGAAGTTAATTCAAACATGAACAGGAGCAAAAAAGATTTGCTTGATATCCTACTAGATTTTACCACCACACACTATGTCAAAGATTCCTCAAAAAGGAAAAGTGACTACGGGCTTGTTTTATTTAATGATGTTGATGTTTTATTTAAAGAACATGATAGGGGATATTGGGCAATGATCAGCAAGCTTTGTGAATTTTCACGAAGGCCCCTCGTATTGACTTGTAAGGATTTGTCACTAGTTCCTAGTGAACTTATTGCCTTGGCAAGTGAACAAAACTCTTTGTTTCATACTAAGAAAATTAGTACATCCACAGTCTATGCGTTTCTAACAAAATATTTAAAGTCCCTTGAAATCGAAGTTTGTGACGACTGGCTTCGCGATGTTGTAAAACAAAATAATGCGGATATTAGGAAGTGCTTGATGCACTTGCAGTTTTGGTGCGTTGATACTGGGGCTGATTTGATTTCATCCAAGAACAGACTACCGGTCCTAACATCAACTCTTGGTTCAAGCGTTAAAGATATATCGCAATTAACTGATCTACTCTCCATAAATGATGTTATTGGTCAAGCAACGCTCAATCGTTCCATGGTTAGACAAGAAATAGATTCTACCACAATGACCCCAGAAAAAGTTAATACTTTCCAGGATCAAAATCTGGATGATGAAATGAAATTAAAATTTGATTACGTGATAGATTATAAATTGCATTTAAATGACCCCAATAGACAACCATTATTACCCTTTGAATTGAATATTTACCAACACATCCAAGAACAATTGGAAGCTCGGTATTCCTATGTTAGAGAAGCAAACCA
--- a/test-data/test.fasta Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,11 +0,0 @@ ->Sequence 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other; -gttcgatgcc taaaatacct tcttttgtcc ctacacagac cacagttttc ctaatggctt -tacaccgact agaaattctt gtgcaagcac taattgaaag cggttggcct agagtgttac -cggtttgtat agctgagcgc gtctcttgcc ctgatcaaag gttcattttc tctactttgg -aagacgttgt ggaagaatac aacaagtacg agtctctccc ccctggtttg ctgattactg -gatacagttg taataccctt cgcaacaccg cgtaactatc tatatgaatt attttccctt -tattatatgt agtaggttcg tctttaatct tcctttagca agtcttttac tgttttcgac -ctcaatgttc atgttcttag gttgttttgg ataatatgcg gtcagtttaa tcttcgttgt -ttcttcttaa aatatttatt catggtttaa tttttggttt gtacttgttc aggggccagt -tcattattta ctctgtttgt atacagcagt tcttttattt ttagtatgat tttaatttaa -aacaattcta atggtcaaaa a \ No newline at end of file
--- a/test-data/test.paf Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,245 +0,0 @@ -gi|568815454:1200216-1203631 3416 0 3416 + gi|568815529:1421891-1425306 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M -gi|568815454:1200216-1203631 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M -gi|568815454:1200216-1203631 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M -gi|568815454:1200216-1203631 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|568815454:1200216-1203631 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|568815454:1200216-1203631 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|568815454:1200216-1203631 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|568815529:1421891-1425306 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M -gi|568815529:1421891-1425306 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M -gi|568815529:1421891-1425306 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|568815529:1421891-1425306 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|568815529:1421891-1425306 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|568815529:1421891-1425306 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|568815551:1197321-1201446 4126 0 4126 + gi|568815567:1196244-1200852 4609 483 4609 4061 4126 0 NM:i:65 ms:i:7862 AS:i:7862 nn:i:0 tp:A:S cm:i:604 s1:i:3595 de:f:0.0158 rl:i:0 cg:Z:4126M -gi|568815551:1197321-1201446 4126 793 4126 + gi|568815564:1286641-1289973 3333 0 3333 3333 3333 0 NM:i:0 ms:i:6666 AS:i:6666 nn:i:0 tp:A:S cm:i:615 s1:i:3324 de:f:0 rl:i:0 cg:Z:3333M -gi|568815551:1197321-1201446 4126 641 4126 + gi|568815561:1196951-1200436 3486 0 3486 3409 3487 0 NM:i:78 ms:i:6504 AS:i:6504 nn:i:0 tp:A:S cm:i:456 s1:i:2855 de:f:0.0221 rl:i:0 cg:Z:235M1I1996M2D1253M -gi|568815551:1197321-1201446 4126 706 4126 + gi|568815569:1240288-1243708 3421 0 3421 3343 3422 0 NM:i:79 ms:i:6368 AS:i:6368 nn:i:0 tp:A:S cm:i:455 s1:i:2819 de:f:0.0228 rl:i:0 cg:Z:170M1I1996M2D1253M -gi|568815551:1197321-1201446 4126 701 4126 + gi|568815592:29942469-29945883 3415 0 3410 3296 3432 0 NM:i:136 ms:i:6078 AS:i:6078 nn:i:0 tp:A:S cm:i:381 s1:i:2471 de:f:0.0334 rl:i:0 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1000M -gi|568815561:1196951-1200436 3486 65 3486 + gi|568815569:1240288-1243708 3421 0 3421 3398 3421 0 NM:i:23 ms:i:6704 AS:i:6704 nn:i:0 tp:A:S cm:i:574 s1:i:3257 de:f:0.0067 rl:i:0 cg:Z:3421M -gi|568815561:1196951-1200436 3486 0 3486 + gi|568815567:1196244-1200852 4609 1124 4609 3435 3487 0 NM:i:52 ms:i:6660 AS:i:6660 nn:i:0 tp:A:S cm:i:518 s1:i:3068 de:f:0.0146 rl:i:0 cg:Z:235M1D1996M2I1253M -gi|568815561:1196951-1200436 3486 152 3486 + gi|568815564:1286641-1289973 3333 0 3333 3257 3335 0 NM:i:78 ms:i:6200 AS:i:6200 nn:i:0 tp:A:S cm:i:426 s1:i:2708 de:f:0.0231 rl:i:0 cg:Z:83M1D1996M2I1253M -gi|568815561:1196951-1200436 3486 60 3486 + gi|568815592:29942469-29945883 3415 0 3410 3298 3434 0 NM:i:136 ms:i:6084 AS:i:6084 nn:i:0 tp:A:S cm:i:380 s1:i:2501 de:f:0.0328 rl:i:0 cg:Z:175M1D1036M1I126M4I149M17I495M3D165M2I18M1D238M3D1000M -gi|568815564:1286641-1289973 3333 0 3333 + gi|568815567:1196244-1200852 4609 1276 4609 3271 3333 0 NM:i:62 ms:i:6294 AS:i:6294 nn:i:0 tp:A:S cm:i:459 s1:i:2836 de:f:0.0186 rl:i:0 cg:Z:3333M -gi|568815564:1286641-1289973 3333 0 3333 + gi|568815569:1240288-1243708 3421 87 3421 3256 3335 0 NM:i:79 ms:i:6194 AS:i:6194 nn:i:0 tp:A:S cm:i:439 s1:i:2735 de:f:0.0234 rl:i:0 cg:Z:83M1I1996M2D1253M -gi|568815564:1286641-1289973 3333 0 3333 + gi|568815592:29942469-29945883 3415 92 3410 3206 3340 0 NM:i:134 ms:i:5906 AS:i:5906 nn:i:0 tp:A:S cm:i:370 s1:i:2404 de:f:0.0338 rl:i:0 cg:Z:1120M1I130M3I1M1I144M17I495M3D183M1D238M3D1000M -gi|568815567:1196244-1200852 4609 1189 4609 + gi|568815569:1240288-1243708 3421 0 3421 3368 3422 0 NM:i:54 ms:i:6518 AS:i:6518 nn:i:0 tp:A:S cm:i:514 s1:i:3034 de:f:0.0155 rl:i:0 cg:Z:170M1I1996M2D1253M -gi|568815567:1196244-1200852 4609 1184 4609 + gi|568815592:29942469-29945883 3415 0 3410 3293 3432 0 NM:i:139 ms:i:6064 AS:i:6064 nn:i:0 tp:A:S cm:i:374 s1:i:2444 de:f:0.0340 rl:i:0 cg:Z:1212M1I126M4I149M17I495M3D183M1D238M3D1000M -gi|568815569:1240288-1243708 3421 0 3421 + gi|568815592:29942469-29945883 3415 5 3410 3289 3429 0 NM:i:140 ms:i:6050 AS:i:6050 nn:i:0 tp:A:S cm:i:388 s1:i:2487 de:f:0.0341 rl:i:0 cg:Z:170M1D1036M1I126M4I149M17I495M3D165M2I18M1D238M3D1000M -gi|342187237:5004-8419 3416 0 3416 + gi|568815529:1421891-1425306 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M -gi|342187237:5004-8419 3416 0 3416 + gi|568815454:1200216-1203631 3416 0 3416 3416 3416 0 NM:i:0 ms:i:6832 AS:i:6832 nn:i:0 tp:A:S cm:i:637 s1:i:3404 de:f:0 rl:i:0 cg:Z:3416M -gi|342187237:5004-8419 3416 0 3416 + gi|568815592:29942469-29945883 3415 0 3415 3371 3416 0 NM:i:45 ms:i:6560 AS:i:6560 nn:i:0 tp:A:S cm:i:540 s1:i:3085 de:f:0.0132 rl:i:0 cg:Z:1212M1I2203M -gi|342187237:5004-8419 3416 0 3411 + gi|568815567:1196244-1200852 4609 1184 4609 3297 3432 0 NM:i:135 ms:i:6090 AS:i:6090 nn:i:0 tp:A:S cm:i:381 s1:i:2452 de:f:0.0329 rl:i:0 cg:Z:1339M4D149M17D495M3I183M1I238M3I1000M -gi|342187237:5004-8419 3416 0 3416 + gi|528476637:29857558-29915771 58214 54784 58214 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1005M -gi|342187237:5004-8419 3416 0 3411 + gi|568815551:1197321-1201446 4126 701 4126 3289 3432 0 NM:i:143 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:385 s1:i:2485 de:f:0.0355 rl:i:0 cg:Z:1343M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|342187237:5004-8419 3416 0 3411 + gi|568815561:1196951-1200436 3486 60 3486 3290 3434 0 NM:i:144 ms:i:6038 AS:i:6038 nn:i:0 tp:A:S cm:i:371 s1:i:2447 de:f:0.0352 rl:i:0 cg:Z:175M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|342187237:5004-8419 3416 5 3411 + gi|568815569:1240288-1243708 3421 0 3421 3284 3429 0 NM:i:145 ms:i:6022 AS:i:6022 nn:i:0 tp:A:S cm:i:383 s1:i:2483 de:f:0.0355 rl:i:0 cg:Z:170M1I1163M4D149M17D495M3I165M2D18M1I238M3I1000M -gi|342187237:5004-8419 3416 92 3411 + gi|568815564:1286641-1289973 3333 0 3333 3198 3340 0 NM:i:142 ms:i:5860 AS:i:5860 nn:i:0 tp:A:S cm:i:372 s1:i:2412 de:f:0.0362 rl:i:0 cg:Z:1251M3D1M1D144M17D495M3I183M1I238M3I1000M -gi|342187237:5004-8419 3416 0 3416 + gi|528476637:29857558-29915771 58214 0 3428 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:0 cg:Z:185M2I2M4I224M1D3M1I61M1I5M1D108M3D13M1I118M1I486M12I112M4D22M19D127M17D296M1I433M2I589M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M -gi|342187237:5004-8419 3416 3 3416 + gi|528476637:29857558-29915771 58214 38484 41952 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:0 cg:Z:34M1D52M1I123M2I1M1D255M1I4M1D11M1I21M1D12M4I3M1D2M1D4M2D59M3D33M3D38M1I3M2D60M1I25M1D277M1I327M1D132M16D164M5D6M2D207M2I74M7D52M20D363M1D41M3D90M1I103M6I96M1D6M1I117M1D2M1I208M1I132M2D26M4D60M1I165M -gi|342187237:5004-8419 3416 1488 3158 + gi|528476637:29857558-29915771 58214 8636 10269 1295 1729 0 NM:i:434 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2026 rl:i:0 cg:Z:35M1I414M1D3M1I7M1I12M3D44M20D84M3I2M2I2M10I42M1D3M1I9M3I2M4I21M1D24M2I2M4I11M9D11M1D1M1D11M4I8M1D4M1D8M4I60M3I11M1D6M1D17M2I8M1D5M2D38M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M -gi|342187237:5004-8419 3416 891 1307 + gi|528476637:29857558-29915771 58214 44457 44873 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:0 cg:Z:416M -gi|528476637:29857558-29915771 58214 53600 58209 + gi|568815567:1196244-1200852 4609 0 4609 4559 4609 0 NM:i:50 ms:i:8918 AS:i:8918 nn:i:0 tp:A:S cm:i:729 s1:i:4180 de:f:0.0108 rl:i:25 cg:Z:4609M -gi|528476637:29857558-29915771 58214 33375 41952 + gi|528476637:29857558-29915771 58214 49822 58214 7180 8967 0 NM:i:1787 ms:i:8814 AS:i:9504 nn:i:0 tp:A:S cm:i:225 s1:i:2063 de:f:0.1118 rl:i:25 cg:Z:24M4D11M3I103M2I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I137M310D48M4I225M6I3M1D3M350I6M2I46M1D379M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D236M1D10M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D165M -gi|528476637:29857558-29915771 58214 49822 58214 + gi|528476637:29857558-29915771 58214 33375 41952 7180 8967 0 NM:i:1787 ms:i:8814 AS:i:9504 nn:i:0 tp:A:S cm:i:225 s1:i:2063 de:f:0.1118 rl:i:25 cg:Z:24M4I11M3D103M2D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D137M310I48M4D225M6D3M1I3M350D6M2D46M1I379M1D54M1D85M2D21M1D6M90D167M1D74M1I1M2I236M1I10M4I48M19D109M4I346M1D52M1I125M1I271M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I311M3I2M1I14M1D148M1I170M7D207M2I66M2D5M6D2M1I39M3D10M20D173M1D189M1D41M3D8M3D79M1I103M6I96M1D6M1I328M1I132M2D26M4D60M1I165M -gi|528476637:29857558-29915771 58214 54083 58209 + gi|568815551:1197321-1201446 4126 0 4126 4107 4126 0 NM:i:19 ms:i:8138 AS:i:8138 nn:i:0 tp:A:S cm:i:726 s1:i:3964 de:f:0.0046 rl:i:25 cg:Z:4126M -gi|528476637:29857558-29915771 58214 54876 58209 + gi|568815564:1286641-1289973 3333 0 3333 3317 3333 0 NM:i:16 ms:i:6570 AS:i:6570 nn:i:0 tp:A:S cm:i:578 s1:i:3203 de:f:0.0048 rl:i:25 cg:Z:3333M -gi|528476637:29857558-29915771 58214 54724 58209 + gi|568815561:1196951-1200436 3486 0 3486 3417 3487 0 NM:i:70 ms:i:6552 AS:i:6552 nn:i:0 tp:A:S cm:i:469 s1:i:2920 de:f:0.0198 rl:i:25 cg:Z:235M1I1996M2D1253M -gi|528476637:29857558-29915771 58214 54789 58209 + gi|568815569:1240288-1243708 3421 0 3421 3347 3422 0 NM:i:75 ms:i:6392 AS:i:6392 nn:i:0 tp:A:S cm:i:462 s1:i:2853 de:f:0.0216 rl:i:25 cg:Z:170M1I1996M2D1253M -gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815592:29942469-29945883 3415 0 3415 3305 3437 0 NM:i:132 ms:i:6112 AS:i:6112 nn:i:0 tp:A:S cm:i:393 s1:i:2554 de:f:0.0322 rl:i:25 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815454:1200216-1203631 3416 0 3416 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:25 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|528476637:29857558-29915771 58214 54784 58214 + gi|568815529:1421891-1425306 3416 0 3416 3296 3437 0 NM:i:141 ms:i:6060 AS:i:6060 nn:i:0 tp:A:S cm:i:389 s1:i:2505 de:f:0.0348 rl:i:25 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|528476637:29857558-29915771 58214 37198 41947 + gi|568815567:1196244-1200852 4609 4 4609 4086 4791 0 NM:i:705 ms:i:5600 AS:i:5670 nn:i:0 tp:A:S cm:i:117 s1:i:1106 de:f:0.1146 rl:i:25 cg:Z:48M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D236M1D10M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I217M3D9M3I48M1D311M1D2M3D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|528476637:29857558-29915771 58214 37770 41947 + gi|568815551:1197321-1201446 4126 0 4126 3656 4215 0 NM:i:559 ms:i:5146 AS:i:5146 nn:i:0 tp:A:S cm:i:119 s1:i:1088 de:f:0.1156 rl:i:25 cg:Z:216M1D10M4D48M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|528476637:29857558-29915771 58214 0 3423 + gi|568815567:1196244-1200852 4609 1184 4609 3154 3460 0 NM:i:306 ms:i:5116 AS:i:5116 nn:i:0 tp:A:S cm:i:190 s1:i:1543 de:f:0.0767 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|528476637:29857558-29915771 58214 0 3428 + gi|528476637:29857558-29915771 58214 54784 58214 3155 3464 0 NM:i:309 ms:i:5110 AS:i:5110 nn:i:0 tp:A:S cm:i:202 s1:i:1617 de:f:0.0775 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|528476637:29857558-29915771 58214 54784 58214 + gi|528476637:29857558-29915771 58214 0 3428 3155 3464 0 NM:i:309 ms:i:5110 AS:i:5110 nn:i:0 tp:A:S cm:i:202 s1:i:1617 de:f:0.0775 rl:i:25 cg:Z:185M2I2M4I225M1D2M1I61M1I5M1D108M3D13M1I118M1I486M12I138M19D440M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M -gi|528476637:29857558-29915771 58214 5 3423 + gi|568815569:1240288-1243708 3421 0 3421 3148 3458 0 NM:i:310 ms:i:5086 AS:i:5086 nn:i:0 tp:A:S cm:i:191 s1:i:1564 de:f:0.0774 rl:i:25 cg:Z:167M1D2M2I9M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|528476637:29857558-29915771 58214 0 3428 + gi|568815529:1421891-1425306 3416 0 3416 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:25 cg:Z:185M2D2M4D224M1I3M1D61M1D5M1I108M3I13M1D118M1D486M12D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|528476637:29857558-29915771 58214 0 3428 + gi|568815454:1200216-1203631 3416 0 3416 3142 3464 0 NM:i:322 ms:i:5064 AS:i:5064 nn:i:0 tp:A:S cm:i:215 s1:i:1596 de:f:0.0772 rl:i:25 cg:Z:185M2D2M4D224M1I3M1D61M1D5M1I108M3I13M1D118M1D486M12D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|528476637:29857558-29915771 58214 0 3423 + gi|568815561:1196951-1200436 3486 60 3486 3144 3463 0 NM:i:319 ms:i:5042 AS:i:5042 nn:i:0 tp:A:S cm:i:188 s1:i:1556 de:f:0.0799 rl:i:25 cg:Z:172M1D2M2I9M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|528476637:29857558-29915771 58214 0 3423 + gi|568815551:1197321-1201446 4126 701 4126 3137 3459 0 NM:i:322 ms:i:5022 AS:i:5022 nn:i:0 tp:A:S cm:i:196 s1:i:1569 de:f:0.0814 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M -gi|528476637:29857558-29915771 58214 0 3428 + gi|568815592:29942469-29945883 3415 0 3415 3134 3463 0 NM:i:329 ms:i:5014 AS:i:5014 nn:i:0 tp:A:S cm:i:206 s1:i:1582 de:f:0.0799 rl:i:25 cg:Z:185M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D485M10D1M1D112M4I22M19I127M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|528476637:29857558-29915771 58214 92 3423 + gi|568815564:1286641-1289973 3333 0 3333 3053 3367 0 NM:i:314 ms:i:4886 AS:i:4886 nn:i:0 tp:A:S cm:i:191 s1:i:1531 de:f:0.0813 rl:i:25 cg:Z:93M2D2M4D225M1I2M1D61M1D5M1I108M3I13M1D118M1D486M12D138M19I440M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M -gi|528476637:29857558-29915771 58214 38484 42085 + gi|528476637:29857558-29915771 58214 3 3561 3171 3642 0 NM:i:471 ms:i:4520 AS:i:4520 nn:i:0 tp:A:S cm:i:135 s1:i:1107 de:f:0.1103 rl:i:25 cg:Z:34M1I52M1D95M2I2M4I22M1D202M1D2M1I67M1D19M1I104M1I9M3I47M1I87M1I277M1D106M1D7M2I2M1D68M12I114M1D2M3D20M17D1M1D142M1D164M5I6M2I120M1I86M2D74M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D103M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I84M4I101M1I26M4I358M -gi|528476637:29857558-29915771 58214 3 3561 + gi|528476637:29857558-29915771 58214 38484 42085 3171 3642 0 NM:i:471 ms:i:4520 AS:i:4520 nn:i:0 tp:A:S cm:i:135 s1:i:1107 de:f:0.1103 rl:i:25 cg:Z:34M1D52M1I95M2D2M4D22M1I202M1I2M1D67M1I19M1D104M1D9M3D47M1D87M1D277M1I106M1I7M2D2M1I68M12D114M1I2M3I20M17I1M1I142M1I164M5D6M2D120M1D86M2I74M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I103M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D84M4D101M1D26M4D358M -gi|528476637:29857558-29915771 58214 38421 41947 + gi|568815561:1196951-1200436 3486 0 3486 3090 3555 0 NM:i:465 ms:i:4352 AS:i:4352 nn:i:0 tp:A:S cm:i:95 s1:i:919 de:f:0.1166 rl:i:25 cg:Z:97M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M1D2M3D14M1I148M1D170M7I207M2D74M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815592:29942469-29945883 3415 3 3415 3041 3495 0 NM:i:454 ms:i:4326 AS:i:4326 nn:i:0 tp:A:S cm:i:110 s1:i:990 de:f:0.1121 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I222M3D4M3I48M1D180M1I146M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M -gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815454:1200216-1203631 3416 3 3416 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M -gi|528476637:29857558-29915771 58214 38484 41952 + gi|568815529:1421891-1425306 3416 3 3416 3039 3493 0 NM:i:454 ms:i:4320 AS:i:4320 nn:i:0 tp:A:S cm:i:107 s1:i:1001 de:f:0.1130 rl:i:25 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I164M5I6M2I207M2D74M7I52M20I363M1I41M3I90M1D103M6D96M1I6M1D117M1I2M1D208M1D132M2I26M4I60M1D165M -gi|528476637:29857558-29915771 58214 38486 41947 + gi|568815569:1240288-1243708 3421 0 3421 3037 3486 0 NM:i:449 ms:i:4310 AS:i:4310 nn:i:0 tp:A:S cm:i:97 s1:i:949 de:f:0.1154 rl:i:25 cg:Z:32M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I82M2I3M1I32M3I40M1I62M1D25M1I277M1D311M1D2M3D14M1I148M1D170M7I207M2D74M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|528476637:29857558-29915771 58214 38573 41947 + gi|568815564:1286641-1289973 3333 0 3333 2962 3402 0 NM:i:440 ms:i:4198 AS:i:4198 nn:i:0 tp:A:S cm:i:100 s1:i:935 de:f:0.1145 rl:i:25 cg:Z:121M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D311M3D2M1D14M1I148M1D170M7I207M2D66M2I5M6I2M1D39M3I10M20I173M1I189M1I41M3I8M3I79M1D103M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|528476637:29857558-29915771 58214 3555 4654 + gi|528476637:29857558-29915771 58214 43020 44118 982 1103 0 NM:i:121 ms:i:1478 AS:i:1478 nn:i:0 tp:A:S cm:i:30 s1:i:230 de:f:0.1065 rl:i:25 cg:Z:156M1I416M3D62M3I27M1I156M1D277M -gi|528476637:29857558-29915771 58214 43020 44118 + gi|528476637:29857558-29915771 58214 3555 4654 982 1103 0 NM:i:121 ms:i:1478 AS:i:1478 nn:i:0 tp:A:S cm:i:30 s1:i:230 de:f:0.1065 rl:i:25 cg:Z:156M1D416M3I62M3D27M1D156M1I277M -gi|528476637:29857558-29915771 58214 48998 49823 + gi|528476637:29857558-29915771 58214 31581 32408 735 834 0 NM:i:99 ms:i:1062 AS:i:1062 nn:i:0 tp:A:S cm:i:17 s1:i:194 de:f:0.1134 rl:i:25 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D28M2D3M2D113M1I3M3I4M1I155M -gi|528476637:29857558-29915771 58214 31581 32408 + gi|528476637:29857558-29915771 58214 48998 49823 735 834 0 NM:i:99 ms:i:1062 AS:i:1062 nn:i:0 tp:A:S cm:i:17 s1:i:194 de:f:0.1134 rl:i:25 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I28M2I3M2I113M1D3M3D4M1D155M -gi|528476637:29857558-29915771 58214 1488 3170 + gi|528476637:29857558-29915771 58214 8615 10269 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:25 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M -gi|528476637:29857558-29915771 58214 8615 10269 + gi|528476637:29857558-29915771 58214 1488 3170 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:25 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M -gi|528476637:29857558-29915771 58214 39969 41686 + gi|528476637:29857558-29915771 58214 8615 10266 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:25 cg:Z:11M2I12M1D32M1I131M1I1M5I6M1I202M2D69M4I9M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M27I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D38M -gi|528476637:29857558-29915771 58214 8615 10266 + gi|528476637:29857558-29915771 58214 39969 41686 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:25 cg:Z:11M2D12M1I32M1D131M1D1M5D6M1D202M2I69M4D9M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M27D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I38M -gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815454:1200216-1203631 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815529:1421891-1425306 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8636 10269 + gi|568815592:29942469-29945883 3415 1487 3157 1291 1726 0 NM:i:435 ms:i:944 AS:i:950 nn:i:0 tp:A:S cm:i:9 s1:i:103 de:f:0.2060 rl:i:25 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M2I12M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 30702 31515 + gi|528476637:29857558-29915771 58214 45466 46301 718 857 0 NM:i:139 ms:i:940 AS:i:952 nn:i:0 tp:A:S cm:i:50 s1:i:326 de:f:0.1125 rl:i:25 cg:Z:36M2D6M1I4M3I8M3D14M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D197M7I1M2I3M1D15M2D1M1D138M3D41M -gi|528476637:29857558-29915771 58214 45466 46301 + gi|528476637:29857558-29915771 58214 30702 31515 718 857 0 NM:i:139 ms:i:940 AS:i:952 nn:i:0 tp:A:S cm:i:50 s1:i:326 de:f:0.1125 rl:i:25 cg:Z:36M2I6M1D4M3D8M3I14M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I197M7D1M2D3M1I15M2I1M1I138M3I41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815564:1286641-1289973 3333 1410 3080 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815551:1197321-1201446 4126 2203 3873 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|528476637:29857558-29915771 58214 56286 57956 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 56286 57956 + gi|528476637:29857558-29915771 58214 8629 10269 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:25 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I69M2I49M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815561:1196951-1200436 3486 1561 3233 1285 1737 0 NM:i:452 ms:i:874 AS:i:880 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2107 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I78M14D4M2D2M1I48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815567:1196244-1200852 4609 2686 4356 1284 1732 0 NM:i:448 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:9 s1:i:100 de:f:0.2132 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M3D1M5D58M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M1D1M1D11M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 8629 10269 + gi|568815569:1240288-1243708 3421 1496 3168 1284 1736 0 NM:i:452 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2118 rl:i:25 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D3M8D48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|528476637:29857558-29915771 58214 27052 28249 + gi|528476637:29857558-29915771 58214 4739 5908 925 1206 0 NM:i:281 ms:i:726 AS:i:726 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2181 rl:i:25 cg:Z:100M1D5M1I139M7I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M -gi|528476637:29857558-29915771 58214 4739 5908 + gi|528476637:29857558-29915771 58214 27052 28249 925 1207 0 NM:i:282 ms:i:726 AS:i:726 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2174 rl:i:25 cg:Z:100M1I5M1D139M7D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815569:1240288-1243708 3421 885 1301 398 416 0 NM:i:18 ms:i:724 AS:i:724 nn:i:0 tp:A:S cm:i:39 s1:i:284 de:f:0.0433 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815567:1196244-1200852 4609 2075 2491 398 416 0 NM:i:18 ms:i:724 AS:i:724 nn:i:0 tp:A:S cm:i:39 s1:i:295 de:f:0.0433 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815592:29942469-29945883 3415 891 1306 398 416 0 NM:i:18 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:42 s1:i:282 de:f:0.0433 rl:i:25 cg:Z:321M1I94M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815561:1196951-1200436 3486 950 1366 397 416 0 NM:i:19 ms:i:718 AS:i:718 nn:i:0 tp:A:S cm:i:36 s1:i:274 de:f:0.0457 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 55675 56091 + gi|528476637:29857558-29915771 58214 44457 44873 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815551:1197321-1201446 4126 1592 2008 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815564:1286641-1289973 3333 799 1215 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|528476637:29857558-29915771 58214 55675 56091 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815454:1200216-1203631 3416 891 1307 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 44457 44873 + gi|568815529:1421891-1425306 3416 891 1307 392 416 0 NM:i:24 ms:i:688 AS:i:688 nn:i:0 tp:A:S cm:i:36 s1:i:238 de:f:0.0577 rl:i:25 cg:Z:416M -gi|528476637:29857558-29915771 58214 886 1289 + gi|528476637:29857558-29915771 58214 44457 44872 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:17 s1:i:133 de:f:0.0891 rl:i:25 cg:Z:324M12D79M -gi|528476637:29857558-29915771 58214 44457 44872 + gi|528476637:29857558-29915771 58214 886 1289 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:17 s1:i:133 de:f:0.0891 rl:i:25 cg:Z:324M12I79M -gi|528476637:29857558-29915771 58214 44457 44872 + gi|528476637:29857558-29915771 58214 39378 39792 361 418 0 NM:i:57 ms:i:496 AS:i:496 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1280 rl:i:25 cg:Z:85M3I4M3D48M1I274M -gi|528476637:29857558-29915771 58214 39378 39792 + gi|528476637:29857558-29915771 58214 44457 44872 361 418 0 NM:i:57 ms:i:496 AS:i:496 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1280 rl:i:25 cg:Z:85M3D4M3I48M1D274M -gi|528476637:29857558-29915771 58214 49208 49824 + gi|528476637:29857558-29915771 58214 7043 7661 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:25 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I8M1D4M2I25M1I11M1D5M1D2M2I4M1D4M1D7M5I7M1I133M1I49M1I29M4I5M3D3M1D53M -gi|528476637:29857558-29915771 58214 7043 7661 + gi|528476637:29857558-29915771 58214 49208 49824 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:25 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D8M1I4M2D25M1D11M1I5M1I2M2D4M1I4M1I7M5D7M1D133M1D49M1D29M4D5M3I3M1I53M -gi|528476637:29857558-29915771 58214 29092 29357 - gi|528476637:29857558-29915771 58214 28378 28643 236 265 0 NM:i:29 ms:i:356 AS:i:356 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1094 zd:i:1 rl:i:25 cg:Z:265M -gi|528476637:29857558-29915771 58214 28378 28643 - gi|528476637:29857558-29915771 58214 29092 29357 236 265 31 NM:i:29 ms:i:356 AS:i:356 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1094 zd:i:2 rl:i:25 cg:Z:265M -gi|528476637:29857558-29915771 58214 45137 45465 - gi|528476637:29857558-29915771 58214 14421 14731 269 329 0 NM:i:60 ms:i:318 AS:i:318 nn:i:0 tp:A:S cm:i:3 s1:i:42 de:f:0.1433 rl:i:25 cg:Z:35M1D115M1I2M14I113M1I28M3I16M -gi|528476637:29857558-29915771 58214 14421 14731 - gi|528476637:29857558-29915771 58214 45137 45465 269 329 0 NM:i:60 ms:i:318 AS:i:318 nn:i:0 tp:A:S cm:i:3 s1:i:42 de:f:0.1433 rl:i:25 cg:Z:14M3D30M1D113M14D2M1D114M1I36M -gi|528476637:29857558-29915771 58214 6307 7004 - gi|528476637:29857558-29915771 58214 6307 7004 528 727 0 NM:i:199 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2392 rl:i:25 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M8I5M1I8M1I5M1I10M1D5M1D5M1D8M8D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M -gi|528476637:29857558-29915771 58214 8056 8300 + gi|528476637:29857558-29915771 58214 8056 8376 225 321 0 NM:i:96 ms:i:258 AS:i:271 nn:i:0 tp:A:S cm:i:7 s1:i:51 de:f:0.0816 rl:i:25 cg:Z:129M77D89M1I25M -gi|528476637:29857558-29915771 58214 8056 8376 + gi|528476637:29857558-29915771 58214 8056 8300 225 321 0 NM:i:96 ms:i:258 AS:i:271 nn:i:0 tp:A:S cm:i:7 s1:i:51 de:f:0.0816 rl:i:25 cg:Z:129M77I89M1D25M -gi|528476637:29857558-29915771 58214 17754 17858 + gi|528476637:29857558-29915771 58214 17845 17947 98 104 0 NM:i:6 ms:i:172 AS:i:172 nn:i:0 tp:A:S cm:i:8 s1:i:52 de:f:0.0485 rl:i:25 cg:Z:13M2I89M -gi|528476637:29857558-29915771 58214 17845 17947 + gi|528476637:29857558-29915771 58214 17754 17858 98 104 0 NM:i:6 ms:i:172 AS:i:172 nn:i:0 tp:A:S cm:i:8 s1:i:52 de:f:0.0485 rl:i:25 cg:Z:13M2D89M -gi|157734152:29655295-29712160 56866 0 46508 + gi|528476637:29857558-29915771 58214 0 46366 45990 46508 0 NM:i:603 ms:i:90335 AS:i:90495 nn:i:85 tp:A:S cm:i:7995 s1:i:44368 de:f:0.0051 rl:i:96 cg:Z:412M1D2M1I907M4D23M18D6334M7I858M94I3086M37D2996M9D806M2D2326M89I5050M1D4412M2I3477M4D393M1D344M2I610M4I1397M1D4480M1I2166M2D10M2D209M2I678M2I1528M1D21M2I2527M2D17M1I7M2I1114M18I91M -gi|157734152:29655295-29712160 56866 12900 22956 + gi|528476637:29857558-29915771 58214 12858 22836 9939 10067 0 NM:i:128 ms:i:19554 AS:i:19623 nn:i:0 tp:A:S cm:i:5 s1:i:51 de:f:0.0031 rl:i:96 cg:Z:1820M9D806M2D2415M89I4926M -gi|157734152:29655295-29712160 56866 47082 56866 + gi|528476637:29857558-29915771 58214 48429 58214 9630 9801 0 NM:i:171 ms:i:18606 AS:i:18606 nn:i:0 tp:A:S cm:i:1505 s1:i:8643 de:f:0.0150 rl:i:96 cg:Z:179M2D335M1D587M2D3229M2I161M13I113M1I180M8D563M1D518M3D3903M -gi|157734152:29655295-29712160 56866 48470 56866 + gi|528476637:29857558-29915771 58214 33375 41952 7179 8982 60 NM:i:1803 ms:i:8784 AS:i:9498 nn:i:0 tp:A:P cm:i:223 s1:i:1956 s2:i:0 de:f:0.1112 zd:i:2 rl:i:96 cg:Z:24M4I11M3D103M2D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D133M325I52M4D50M1I175M6D3M359D48M1I379M1D54M1D84M3D21M1D6M90D168M1D72M2I2M1I236M1I10M1I48M19D109M4I346M1D52M1I123M2I1M1D254M1I5M1D11M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I311M3I2M1I14M1D148M1I170M7D207M2I66M2D5M6D2M1I39M3D10M20D173M1D189M1D41M3D8M3D79M1I103M6I96M1D6M1I117M1D2M1I208M1I132M2D26M4D60M1I165M -gi|157734152:29655295-29712160 56866 33497 42074 + gi|528476637:29857558-29915771 58214 49822 58214 7174 8964 0 NM:i:1790 ms:i:8766 AS:i:9456 nn:i:0 tp:A:S cm:i:227 s1:i:2051 de:f:0.1132 rl:i:96 cg:Z:24M4D11M3I103M1I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I137M310D48M4I225M6I3M1D3M350I6M2I46M1D379M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D247M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 33497 42074 + gi|157734152:29655295-29712160 56866 48470 56866 7171 8978 60 NM:i:1807 ms:i:8732 AS:i:9446 nn:i:0 tp:A:P cm:i:226 s1:i:1962 s2:i:0 de:f:0.1127 zd:i:2 rl:i:96 cg:Z:24M4D11M3I103M1I43M2I32M3D51M1D139M5D1M1D573M3I3M2I49M1D3M1D13M2D5M1I189M1D36M17D448M1I3M1D215M3I35M4I263M8I23M1D91M1D279M1I133M325D52M4I50M1D175M6I3M359I48M1D379M1I54M1I84M3I21M1I6M90I168M1I72M2D2M1D236M1D59M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D30M1I1M1I72M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 48470 56866 + gi|157734152:29655295-29712160 56866 33497 42074 7171 8978 60 NM:i:1807 ms:i:8732 AS:i:9446 nn:i:0 tp:A:P cm:i:226 s1:i:1962 s2:i:0 de:f:0.1127 zd:i:2 rl:i:96 cg:Z:24M4I11M3D103M1D43M2D32M3I51M1I139M5I1M1I573M3D3M2D49M1I3M1I13M2I5M1D189M1I36M17I448M1D3M1I215M3D35M4D263M8D23M1I91M1I279M1D133M325I52M4D50M1I175M6D3M359D48M1I379M1D54M1D84M3D21M1D6M90D168M1D72M2I2M1I236M1I59M19D109M4I346M1D52M1I123M2I1M1D254M1I5M1D11M1I21M1D12M4I3M1D2M1D4M2D57M2D3M1D32M3D40M1D62M1I25M1D277M1I307M4I20M1D148M1I172M2D2M1D271M1D3M1D2M1D2M4D40M3D10M20D173M1D189M1D41M3D8M3D79M1I30M1D1M1D72M6I96M1D6M1I116M1D3M1I208M1I132M2D26M4D60M1I165M -gi|157734152:29655295-29712160 56866 52256 56861 + gi|568815567:1196244-1200852 4609 0 4609 4503 4609 0 NM:i:106 ms:i:8582 AS:i:8582 nn:i:0 tp:A:S cm:i:628 s1:i:3840 de:f:0.0226 rl:i:96 cg:Z:189M1D518M3D3898M -gi|157734152:29655295-29712160 56866 52738 56861 + gi|568815551:1197321-1201446 4126 0 4126 4100 4126 0 NM:i:26 ms:i:8098 AS:i:8098 nn:i:0 tp:A:S cm:i:722 s1:i:3930 de:f:0.0058 rl:i:96 cg:Z:225M3D3898M -gi|157734152:29655295-29712160 56866 53528 56861 + gi|568815564:1286641-1289973 3333 0 3333 3317 3333 0 NM:i:16 ms:i:6570 AS:i:6570 nn:i:0 tp:A:S cm:i:585 s1:i:3212 de:f:0.0048 rl:i:96 cg:Z:3333M -gi|157734152:29655295-29712160 56866 53376 56861 + gi|568815561:1196951-1200436 3486 0 3486 3397 3487 0 NM:i:90 ms:i:6432 AS:i:6432 nn:i:0 tp:A:S cm:i:442 s1:i:2777 de:f:0.0255 rl:i:96 cg:Z:235M1I1996M2D1253M -gi|157734152:29655295-29712160 56866 53441 56861 + gi|568815569:1240288-1243708 3421 0 3421 3331 3422 0 NM:i:91 ms:i:6296 AS:i:6296 nn:i:0 tp:A:S cm:i:441 s1:i:2741 de:f:0.0263 rl:i:96 cg:Z:170M1I1996M2D1253M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|342187237:5004-8419 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815454:1200216-1203631 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815529:1421891-1425306 3416 0 3416 3310 3437 0 NM:i:127 ms:i:6144 AS:i:6144 nn:i:0 tp:A:S cm:i:427 s1:i:2612 de:f:0.0307 rl:i:96 cg:Z:1343M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|568815592:29942469-29945883 3415 0 3415 3305 3437 0 NM:i:132 ms:i:6112 AS:i:6112 nn:i:0 tp:A:S cm:i:396 s1:i:2527 de:f:0.0322 rl:i:96 cg:Z:1212M1I130M3I1M1I144M17I495M3D183M1D238M3D1005M -gi|157734152:29655295-29712160 56866 37319 42069 + gi|568815567:1196244-1200852 4609 4 4609 4082 4789 0 NM:i:707 ms:i:5566 AS:i:5636 nn:i:0 tp:A:S cm:i:119 s1:i:1112 de:f:0.1165 rl:i:96 cg:Z:48M1I54M1I85M2I21M1I6M90I167M1I74M1D1M2D247M4D48M19I109M4D346M1I52M1D125M1D271M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I217M3D9M3I48M1D307M4D20M1I148M1D169M3I276M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|157734152:29655295-29712160 56866 43615 46576 + gi|157734152:29655295-29712160 56866 43615 46614 2915 3042 0 NM:i:127 ms:i:5546 AS:i:5600 nn:i:0 tp:A:S cm:i:16 s1:i:120 de:f:0.0031 rl:i:96 cg:Z:1340M41D41I1438M32D17M6D6M2D100M2I17M -gi|157734152:29655295-29712160 56866 43615 46614 + gi|157734152:29655295-29712160 56866 43615 46576 2915 3042 0 NM:i:127 ms:i:5546 AS:i:5600 nn:i:0 tp:A:S cm:i:16 s1:i:120 de:f:0.0031 rl:i:96 cg:Z:1340M41I41D1438M32I17M6I6M2I100M2D17M -gi|157734152:29655295-29712160 56866 0 3406 + gi|528476637:29857558-29915771 58214 54784 58214 3161 3445 0 NM:i:284 ms:i:5194 AS:i:5194 nn:i:0 tp:A:S cm:i:208 s1:i:1674 de:f:0.0746 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 0 3401 + gi|568815567:1196244-1200852 4609 1184 4609 3157 3441 0 NM:i:284 ms:i:5182 AS:i:5182 nn:i:0 tp:A:S cm:i:194 s1:i:1592 de:f:0.0747 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|157734152:29655295-29712160 56866 5 3401 + gi|568815569:1240288-1243708 3421 0 3421 3152 3439 0 NM:i:287 ms:i:5158 AS:i:5158 nn:i:0 tp:A:S cm:i:196 s1:i:1628 de:f:0.0751 rl:i:96 cg:Z:167M1D2M2I9M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|157734152:29655295-29712160 56866 0 3406 + gi|568815529:1421891-1425306 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 0 3406 + gi|342187237:5004-8419 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 0 3406 + gi|568815454:1200216-1203631 3416 0 3416 3143 3441 0 NM:i:298 ms:i:5126 AS:i:5126 nn:i:0 tp:A:S cm:i:206 s1:i:1579 de:f:0.0764 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 37891 42069 + gi|568815551:1197321-1201446 4126 0 4126 3654 4213 0 NM:i:559 ms:i:5120 AS:i:5120 nn:i:0 tp:A:S cm:i:117 s1:i:1076 de:f:0.1174 rl:i:96 cg:Z:227M4D48M19I109M4D346M1I52M1D123M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|157734152:29655295-29712160 56866 0 3401 + gi|568815561:1196951-1200436 3486 60 3486 3149 3444 0 NM:i:295 ms:i:5120 AS:i:5120 nn:i:0 tp:A:S cm:i:189 s1:i:1603 de:f:0.0774 rl:i:96 cg:Z:172M1D2M2I9M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I168M2D16M1I47M2D188M3I398M1D40M1I33M1D37M1D11M1D3M1I33M1D57M1I1M2D31M4D96M1I88M1D160M -gi|157734152:29655295-29712160 56866 0 3406 + gi|568815592:29942469-29945883 3415 0 3415 3142 3440 0 NM:i:298 ms:i:5118 AS:i:5118 nn:i:0 tp:A:S cm:i:207 s1:i:1610 de:f:0.0770 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D485M10D1M1D132M1I129M17I296M1D433M2D589M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 0 3401 + gi|568815551:1197321-1201446 4126 701 4126 3142 3440 0 NM:i:298 ms:i:5100 AS:i:5100 nn:i:0 tp:A:S cm:i:198 s1:i:1597 de:f:0.0789 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|157734152:29655295-29712160 56866 0 3406 3142 3445 0 NM:i:303 ms:i:5080 AS:i:5080 nn:i:0 tp:A:S cm:i:193 s1:i:1577 de:f:0.0802 rl:i:96 cg:Z:185M2I2M4I289M1I5M1D108M3D13M1I118M1I486M12I112M4I20M1D442M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M -gi|157734152:29655295-29712160 56866 0 3406 + gi|157734152:29655295-29712160 56866 53436 56866 3142 3445 0 NM:i:303 ms:i:5080 AS:i:5080 nn:i:0 tp:A:S cm:i:193 s1:i:1577 de:f:0.0802 rl:i:96 cg:Z:185M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D165M -gi|157734152:29655295-29712160 56866 53436 56866 + gi|528476637:29857558-29915771 58214 0 3428 3137 3464 0 NM:i:327 ms:i:5002 AS:i:5002 nn:i:0 tp:A:S cm:i:191 s1:i:1549 de:f:0.0827 rl:i:96 cg:Z:185M2I2M4I225M1D2M1I61M1I5M1D108M3D13M1I118M1I486M12I138M19D440M1I198M3D184M1D47M2I188M3D398M1I40M1D33M1I37M1I48M1I57M1D1M2I31M4I96M1D88M1I165M -gi|157734152:29655295-29712160 56866 92 3401 + gi|568815564:1286641-1289973 3333 0 3333 3058 3348 0 NM:i:290 ms:i:4964 AS:i:4964 nn:i:0 tp:A:S cm:i:193 s1:i:1559 de:f:0.0786 rl:i:96 cg:Z:93M2D2M4D289M1D5M1I108M3I13M1D118M1D486M12D112M4D20M1I442M1D198M3I184M1I47M2D188M3I398M1D40M1I33M1D37M1D48M1D57M1I1M2D31M4D96M1I88M1D160M -gi|157734152:29655295-29712160 56866 3 3539 + gi|528476637:29857558-29915771 58214 38484 42085 3172 3624 0 NM:i:452 ms:i:4586 AS:i:4586 nn:i:0 tp:A:S cm:i:136 s1:i:1127 de:f:0.1080 rl:i:96 cg:Z:34M1D52M1I95M2D2M4D22M1I272M1I19M1D104M1D9M3D47M1D87M1D222M5I3M5D47M1I106M1I7M2D2M1I68M12D279M1I164M5D6M2D120M1D86M2I74M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I103M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D84M4D101M1D26M4D358M -gi|157734152:29655295-29712160 56866 38606 42207 + gi|157734152:29655295-29712160 56866 3 3539 3166 3622 0 NM:i:456 ms:i:4550 AS:i:4550 nn:i:0 tp:A:S cm:i:135 s1:i:1116 de:f:0.1102 rl:i:96 cg:Z:34M1I52M1D95M2I2M4I22M1D272M1D19M1I104M1I9M3I47M1I87M1I222M5D3M5I47M1D106M1D7M2I2M1D68M12I279M1D169M3I121M1I162M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D30M1I1M1I72M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I85M4I100M1I26M4I358M -gi|157734152:29655295-29712160 56866 3 3539 + gi|157734152:29655295-29712160 56866 38606 42207 3166 3622 0 NM:i:456 ms:i:4550 AS:i:4550 nn:i:0 tp:A:S cm:i:135 s1:i:1116 de:f:0.1102 rl:i:96 cg:Z:34M1D52M1I95M2D2M4D22M1I272M1I19M1D104M1D9M3D47M1D87M1D222M5I3M5D47M1I106M1I7M2D2M1I68M12D279M1I169M3D121M1D162M7D58M14D6M5D1M1D209M2D139M1D42M2D1M1D88M1I30M1D1M1D72M6I96M1D6M1I106M1D40M1I33M1D37M1D52M1D85M4D100M1D26M4D358M -gi|157734152:29655295-29712160 56866 38606 42207 + gi|528476637:29857558-29915771 58214 3 3561 3162 3640 0 NM:i:478 ms:i:4470 AS:i:4470 nn:i:0 tp:A:S cm:i:132 s1:i:1092 de:f:0.1130 rl:i:96 cg:Z:34M1I52M1D95M2I2M4I22M1D202M1D2M1I67M1D19M1I104M1I9M3I47M1I87M1I277M1D106M1D7M2I2M1D68M12I110M4D26M17D1M1D142M1D169M3I121M1I162M7I58M14I6M5I1M1I209M2I139M1I42M2I1M1I88M1D30M1I1M1I72M6D96M1I6M1D106M1I40M1D33M1I37M1I52M1I85M4I100M1I26M4I358M -gi|157734152:29655295-29712160 56866 38543 42069 + gi|568815561:1196951-1200436 3486 0 3486 3089 3554 0 NM:i:465 ms:i:4338 AS:i:4338 nn:i:0 tp:A:S cm:i:95 s1:i:925 de:f:0.1177 rl:i:96 cg:Z:97M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D169M3I284M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815592:29942469-29945883 3415 3 3415 3036 3493 0 NM:i:457 ms:i:4300 AS:i:4300 nn:i:0 tp:A:S cm:i:112 s1:i:1008 de:f:0.1138 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I40M1I62M1D25M1I222M3D4M3I48M1D180M1I146M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 38606 42074 + gi|342187237:5004-8419 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815454:1200216-1203631 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 38606 42074 + gi|568815529:1421891-1425306 3416 3 3416 3034 3491 0 NM:i:457 ms:i:4294 AS:i:4294 nn:i:0 tp:A:S cm:i:108 s1:i:1013 de:f:0.1147 rl:i:96 cg:Z:34M1I52M1D123M1I1M2D255M1D4M1I11M1D21M1I12M4D3M1I2M1I4M2I59M3I33M3I38M1D3M2I60M1D25M1I277M1D327M1I132M16I169M3I284M7I52M20I363M1I41M3I90M1D29M2I74M6D96M1I6M1D116M1I3M1D208M1D132M2I26M4I60M1D165M -gi|157734152:29655295-29712160 56866 38608 42069 + gi|568815569:1240288-1243708 3421 0 3421 3034 3485 0 NM:i:451 ms:i:4284 AS:i:4284 nn:i:0 tp:A:S cm:i:97 s1:i:955 de:f:0.1170 rl:i:96 cg:Z:32M1I52M1D81M1I43M1D255M1D4M1I11M1D21M1I82M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D169M3I284M7I39M3I10M20I158M2D15M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|157734152:29655295-29712160 56866 38697 42069 + gi|568815564:1286641-1289973 3333 2 3333 2959 3398 0 NM:i:439 ms:i:4172 AS:i:4172 nn:i:0 tp:A:S cm:i:98 s1:i:923 de:f:0.1165 rl:i:96 cg:Z:119M1I1M2D254M1D5M1I11M1D21M1I12M4D3M1I2M1I4M2I57M2I3M1I32M3I40M1I62M1D25M1I277M1D307M4D20M1I148M1D172M2I2M1I271M1I3M1I2M1I2M4I40M3I10M20I173M1I189M1I41M3I8M3I79M1D17M1D3M1I9M1I1M1I72M6D96M1I6M1D328M1D132M2I26M4I60M1D160M -gi|157734152:29655295-29712160 56866 3533 4632 + gi|528476637:29857558-29915771 58214 43020 44118 979 1103 0 NM:i:124 ms:i:1460 AS:i:1460 nn:i:0 tp:A:S cm:i:27 s1:i:217 de:f:0.1092 rl:i:96 cg:Z:156M1I416M3D62M3I27M1I156M1D277M -gi|157734152:29655295-29712160 56866 43143 44241 + gi|528476637:29857558-29915771 58214 3555 4654 977 1103 0 NM:i:126 ms:i:1448 AS:i:1448 nn:i:0 tp:A:S cm:i:31 s1:i:245 de:f:0.1110 rl:i:96 cg:Z:156M1D416M3I62M3D27M1D156M1I277M -gi|157734152:29655295-29712160 56866 43143 44241 + gi|157734152:29655295-29712160 56866 3533 4632 975 1103 0 NM:i:128 ms:i:1436 AS:i:1436 nn:i:0 tp:A:S cm:i:28 s1:i:232 de:f:0.1128 rl:i:96 cg:Z:156M1D416M3I62M3D27M1D156M1I277M -gi|157734152:29655295-29712160 56866 3533 4632 + gi|157734152:29655295-29712160 56866 43143 44241 975 1103 0 NM:i:128 ms:i:1436 AS:i:1436 nn:i:0 tp:A:S cm:i:28 s1:i:232 de:f:0.1128 rl:i:96 cg:Z:156M1I416M3D62M3I27M1I156M1D277M -gi|157734152:29655295-29712160 56866 47648 48471 + gi|528476637:29857558-29915771 58214 31581 32408 734 834 0 NM:i:100 ms:i:1064 AS:i:1064 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1114 rl:i:96 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D29M6D113M2I3M2I4M1I155M -gi|157734152:29655295-29712160 56866 31699 32530 + gi|528476637:29857558-29915771 58214 48998 49823 733 838 0 NM:i:105 ms:i:1046 AS:i:1046 nn:i:0 tp:A:S cm:i:17 s1:i:193 de:f:0.1147 rl:i:96 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I31M8I113M1D3M3D4M1D155M -gi|157734152:29655295-29712160 56866 47648 48471 + gi|157734152:29655295-29712160 56866 31699 32530 732 838 0 NM:i:106 ms:i:1044 AS:i:1044 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1138 rl:i:96 cg:Z:9M2D100M1I166M1I2M1D93M1D142M1D29M10D113M2I3M2I4M1I155M -gi|157734152:29655295-29712160 56866 31699 32530 + gi|157734152:29655295-29712160 56866 47648 48471 732 838 0 NM:i:106 ms:i:1044 AS:i:1044 nn:i:0 tp:A:S cm:i:19 s1:i:213 de:f:0.1138 rl:i:96 cg:Z:9M2I100M1D166M1D2M1I93M1I142M1I29M10I113M2D3M2D4M1D155M -gi|157734152:29655295-29712160 56866 8694 10348 + gi|528476637:29857558-29915771 58214 1488 3170 1320 1753 0 NM:i:433 ms:i:1012 AS:i:1018 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1961 rl:i:96 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M -gi|157734152:29655295-29712160 56866 8694 10348 + gi|157734152:29655295-29712160 56866 1466 3148 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2D45M1D260M1I153M1I3M1D7M1D12M3I41M14I4M6I78M3D6M5D3M7D55M5D2M2D21M1I26M2I2M6I11M1D6M2D5M2I11M4D8M1I4M1I8M4D59M3D12M1I6M1I17M2D8M1I5M2I38M2I47M2D15M26D22M1D7M1I75M2I1M5I22M1D5M1D6M1D3M3I20M1D115M1I44M5D3M1I1M1I17M1I41M1I2M2D7M1D3M1I36M2I6M7D3M3D63M1I3M5I37M3D2M2D9M1I41M -gi|157734152:29655295-29712160 56866 1466 3148 + gi|528476637:29857558-29915771 58214 8615 10269 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M -gi|157734152:29655295-29712160 56866 1466 3148 + gi|157734152:29655295-29712160 56866 8694 10348 1318 1753 0 NM:i:435 ms:i:1000 AS:i:1006 nn:i:0 tp:A:S cm:i:12 s1:i:120 de:f:0.1973 rl:i:96 cg:Z:11M2I45M1I260M1D153M1D3M1I7M1I12M3D41M14D4M6D78M3I6M5I3M7I55M5I2M2I21M1D26M2D2M6D11M1I6M2I5M2D11M4I8M1D4M1D8M4I59M3I12M1D6M1D17M2I8M1D5M2D38M2D47M2I15M26I22M1I7M1D75M2D1M5D22M1I5M1I6M1I3M3D20M1I115M1D44M5I3M1D1M1D17M1D41M1D2M2I7M1I3M1D36M2D6M7I3M3I63M1D3M5D37M3I2M2I9M1D41M -gi|157734152:29655295-29712160 56866 40091 41811 + gi|528476637:29857558-29915771 58214 8615 10269 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2I12M1D32M1I131M2I6M1I268M1I4M3I11M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M29I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D41M -gi|157734152:29655295-29712160 56866 40091 41811 + gi|157734152:29655295-29712160 56866 8694 10348 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2I12M1D32M1I131M2I6M1I268M1I4M3I11M1I2M3I15M3D162M15I32M1I5M6I31M1D26M2D1M4D14M1I6M2I5M2D11M4I8M1D4M1D8M4I55M3I23M1D17M2I54M2D4M1D3M1I43M1I23M29I1M1D51M5D1M1D33M2D1M2D6M3D55M2I6M1D38M1I4M1D24M1I5M1D74M1I6M1D2M1I1M1I61M2I49M1I7M5I3M3I63M1D3M1D41M3I2M2I9M1D41M -gi|157734152:29655295-29712160 56866 8694 10348 + gi|157734152:29655295-29712160 56866 40091 41811 1326 1760 0 NM:i:434 ms:i:984 AS:i:993 nn:i:0 tp:A:S cm:i:7 s1:i:86 de:f:0.2060 rl:i:96 cg:Z:11M2D12M1I32M1D131M2D6M1D268M1D4M3D11M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M29D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I41M -gi|157734152:29655295-29712160 56866 8694 10345 + gi|528476637:29857558-29915771 58214 39969 41686 1323 1759 0 NM:i:436 ms:i:974 AS:i:981 nn:i:0 tp:A:S cm:i:11 s1:i:113 de:f:0.2059 rl:i:96 cg:Z:11M2D12M1I32M1D131M1D1M5D6M1D202M2I69M4D9M1D2M3D15M3I162M15D32M1D5M6D31M1I26M2I1M4I14M1D6M2D5M2I11M4D8M1I4M1I8M4D55M3D23M1I17M2D54M2I4M1I3M1D43M1D23M27D1M1I51M5I1M1I33M2I1M2I6M3I55M2D6M1I39M1I3M1D24M1D5M1I74M1D6M1I2M1D1M1D61M2D49M1D7M5D3M3D63M1I3M1I41M3D2M2D9M1I38M -gi|157734152:29655295-29712160 56866 8715 10348 + gi|342187237:5004-8419 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815529:1421891-1425306 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815454:1200216-1203631 3416 1488 3158 1295 1726 0 NM:i:431 ms:i:964 AS:i:970 nn:i:0 tp:A:S cm:i:10 s1:i:118 de:f:0.2041 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M1I1M1I11M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 45590 46424 + gi|528476637:29857558-29915771 58214 30702 31514 718 856 0 NM:i:138 ms:i:944 AS:i:956 nn:i:0 tp:A:S cm:i:50 s1:i:439 de:f:0.1114 zd:i:1 rl:i:96 cg:Z:36M2I6M1D4M3D8M3I14M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I197M7D1M2D3M1I15M2I1M1I138M3I40M -gi|157734152:29655295-29712160 56866 8715 10348 + gi|568815592:29942469-29945883 3415 1487 3157 1291 1726 0 NM:i:435 ms:i:944 AS:i:950 nn:i:0 tp:A:S cm:i:9 s1:i:103 de:f:0.2060 rl:i:96 cg:Z:35M1D414M1I3M1D7M1D12M3I44M20I84M3D2M2D2M10D42M1I3M1D9M3D2M4D21M1I30M6I7M1D3M2D11M2I12M4D8M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I38M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 30823 31632 + gi|157734152:29655295-29712160 56866 45590 46426 716 858 0 NM:i:142 ms:i:934 AS:i:946 nn:i:0 tp:A:S cm:i:47 s1:i:408 de:f:0.1106 zd:i:1 rl:i:96 cg:Z:36M2D5M7D20M4I3M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D48M1D148M7I1M2I3M1D15M2D1M1D138M3D42M -gi|157734152:29655295-29712160 56866 45590 46426 + gi|157734152:29655295-29712160 56866 30823 31632 716 858 0 NM:i:142 ms:i:934 AS:i:946 nn:i:0 tp:A:S cm:i:47 s1:i:408 de:f:0.1106 zd:i:1 rl:i:96 cg:Z:36M2I5M7I20M4D3M2D4M1D10M2D15M1D27M1D80M1D63M1D128M32I48M1I148M7D1M2D3M1I15M2I1M1I138M3I42M -gi|157734152:29655295-29712160 56866 30823 31630 + gi|528476637:29857558-29915771 58214 45466 46300 713 856 0 NM:i:143 ms:i:924 AS:i:936 nn:i:0 tp:A:S cm:i:47 s1:i:312 de:f:0.1121 rl:i:96 cg:Z:36M2D5M7D20M4I3M2I4M1I10M2I15M1I27M1I80M1I63M1I128M32D48M1D148M7I1M2I3M1D15M2D1M1D138M3D40M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815551:1197321-1201446 4126 2203 3873 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|157734152:29655295-29712160 56866 54938 56608 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D71M2D47M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815564:1286641-1289973 3333 1410 3080 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 54938 56608 + gi|157734152:29655295-29712160 56866 8708 10348 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:96 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|528476637:29857558-29915771 58214 56286 57956 1286 1731 0 NM:i:445 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2115 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M6D1M2D58M3D2M3D21M1I30M6I11M1D6M1I4M3I13M3D10M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 54938 56608 + gi|528476637:29857558-29915771 58214 8629 10269 1286 1732 0 NM:i:446 ms:i:888 AS:i:894 nn:i:0 tp:A:S cm:i:12 s1:i:132 de:f:0.2110 rl:i:96 cg:Z:42M1I414M1D3M1I7M1I12M3D21M1D2M2D18M20D78M12I3M2I1M2I2M1D58M3I2M3I21M1D30M6D11M1I6M1D4M3D13M3I10M1I2M2I7M4I60M3I11M1D6M1D17M2I8M1D5M2D8M2D2M1D25M2D4M1D3M1I39M2I15M26I105M2D1M5D59M1I108M1I2M1D47M2I71M2I47M1D6M7I3M3I40M2I3M1D19M1D7M1D37M3I12M1I41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815561:1196951-1200436 3486 1561 3233 1285 1737 0 NM:i:452 ms:i:874 AS:i:880 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2107 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I78M14D4M2D2M1I48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815567:1196244-1200852 4609 2686 4356 1284 1732 0 NM:i:448 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:9 s1:i:100 de:f:0.2132 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D2M3D1M5D58M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M1D1M1D11M1D2M2D7M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 8708 10348 + gi|568815569:1240288-1243708 3421 1496 3168 1284 1736 0 NM:i:452 ms:i:868 AS:i:874 nn:i:0 tp:A:S cm:i:10 s1:i:116 de:f:0.2118 rl:i:96 cg:Z:42M1D414M1I3M1D7M1D12M3I21M1I2M2I18M20I79M3D3M4D3M8D48M2D10M3D2M3D21M1I30M6I11M1D6M2D7M4I4M1I3M7D7M1I4M1I8M4D60M3D11M1I6M1I17M2D8M1I5M2I8M2I2M1I25M2I4M1I3M1D39M2D15M26D105M2I1M5I59M1D108M1D2M1I47M2D69M2D49M1I6M7D3M3D40M2D3M1I19M1I7M1I37M3D12M1D41M -gi|157734152:29655295-29712160 56866 46634 47076 + gi|157734152:29655295-29712160 56866 46006 46443 427 443 0 NM:i:16 ms:i:796 AS:i:796 nn:i:0 tp:A:S cm:i:59 s1:i:350 de:f:0.0251 rl:i:96 cg:Z:405M6I20M1D11M -gi|157734152:29655295-29712160 56866 46006 46443 + gi|157734152:29655295-29712160 56866 46634 47076 427 442 0 NM:i:15 ms:i:796 AS:i:796 nn:i:0 tp:A:S cm:i:59 s1:i:350 de:f:0.0273 rl:i:96 cg:Z:405M4D21M1D11M -gi|157734152:29655295-29712160 56866 46634 47073 + gi|528476637:29857558-29915771 58214 45882 46332 428 450 0 NM:i:22 ms:i:782 AS:i:782 nn:i:0 tp:A:S cm:i:56 s1:i:327 de:f:0.0295 rl:i:96 cg:Z:393M10D38M1D8M -gi|157734152:29655295-29712160 56866 4717 5886 + gi|528476637:29857558-29915771 58214 27052 28249 926 1207 0 NM:i:281 ms:i:732 AS:i:732 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2166 rl:i:96 cg:Z:100M1I5M1D139M7D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M -gi|157734152:29655295-29712160 56866 27171 28370 + gi|157734152:29655295-29712160 56866 4717 5886 925 1208 0 NM:i:283 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2181 rl:i:96 cg:Z:100M1D5M1I139M9I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M -gi|157734152:29655295-29712160 56866 4717 5886 + gi|157734152:29655295-29712160 56866 27171 28370 925 1209 0 NM:i:284 ms:i:722 AS:i:722 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2174 rl:i:96 cg:Z:100M1I5M1D139M9D13M1D133M7D80M1I58M1D6M1I70M1D31M2I5M1D15M1D3M1D17M1I2M1D168M9D2M1D48M2D113M2I73M2I4M2D15M1D23M1D36M -gi|157734152:29655295-29712160 56866 27171 28370 + gi|528476637:29857558-29915771 58214 4739 5908 924 1208 0 NM:i:284 ms:i:716 AS:i:716 nn:i:0 tp:A:S cm:i:8 s1:i:95 de:f:0.2189 rl:i:96 cg:Z:100M1D5M1I139M9I13M1I133M7I80M1D58M1I6M1D70M1I31M2D5M1I15M1I3M1I16M1I3M1D168M9I2M1I48M2I113M2D73M1I5M1D15M1I23M1I36M -gi|157734152:29655295-29712160 56866 54327 54743 + gi|528476637:29857558-29915771 58214 44457 44873 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:37 s1:i:254 de:f:0.0481 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815569:1240288-1243708 3421 885 1301 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:32 s1:i:246 de:f:0.0481 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815567:1196244-1200852 4609 2075 2491 396 416 0 NM:i:20 ms:i:712 AS:i:712 nn:i:0 tp:A:S cm:i:32 s1:i:257 de:f:0.0481 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815592:29942469-29945883 3415 891 1306 396 416 0 NM:i:20 ms:i:710 AS:i:710 nn:i:0 tp:A:S cm:i:35 s1:i:244 de:f:0.0481 rl:i:96 cg:Z:321M1I94M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815561:1196951-1200436 3486 950 1366 395 416 0 NM:i:21 ms:i:706 AS:i:706 nn:i:0 tp:A:S cm:i:29 s1:i:236 de:f:0.0505 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|528476637:29857558-29915771 58214 55675 56091 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815551:1197321-1201446 4126 1592 2008 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815564:1286641-1289973 3333 799 1215 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|157734152:29655295-29712160 56866 54327 54743 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 54327 54743 + gi|157734152:29655295-29712160 56866 44580 44996 393 416 0 NM:i:23 ms:i:694 AS:i:694 nn:i:0 tp:A:S cm:i:30 s1:i:216 de:f:0.0553 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815529:1421891-1425306 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|568815454:1200216-1203631 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 44580 44996 + gi|342187237:5004-8419 3416 891 1307 390 416 0 NM:i:26 ms:i:676 AS:i:676 nn:i:0 tp:A:S cm:i:29 s1:i:188 de:f:0.0625 rl:i:96 cg:Z:416M -gi|157734152:29655295-29712160 56866 886 1289 + gi|528476637:29857558-29915771 58214 44457 44872 370 415 0 NM:i:45 ms:i:580 AS:i:580 nn:i:0 tp:A:S cm:i:16 s1:i:142 de:f:0.0842 rl:i:96 cg:Z:324M12D79M -gi|157734152:29655295-29712160 56866 46651 47139 + gi|528476637:29857558-29915771 58214 31111 31578 418 497 0 NM:i:79 ms:i:570 AS:i:573 nn:i:0 tp:A:S cm:i:18 s1:i:159 de:f:0.1011 rl:i:96 cg:Z:196M7D1M2D3M1I15M2I1M1I138M3I30M23I74M -gi|157734152:29655295-29712160 56866 44580 44995 + gi|157734152:29655295-29712160 56866 886 1289 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:11 s1:i:116 de:f:0.0891 rl:i:96 cg:Z:324M12I79M -gi|157734152:29655295-29712160 56866 886 1289 + gi|157734152:29655295-29712160 56866 44580 44995 368 415 0 NM:i:47 ms:i:568 AS:i:568 nn:i:0 tp:A:S cm:i:11 s1:i:116 de:f:0.0891 rl:i:96 cg:Z:324M12D79M -gi|157734152:29655295-29712160 56866 31228 31696 + gi|157734152:29655295-29712160 56866 46651 47139 418 497 0 NM:i:79 ms:i:560 AS:i:560 nn:i:0 tp:A:S cm:i:16 s1:i:161 de:f:0.1068 rl:i:96 cg:Z:47M1D148M7I1M2I3M1D15M2D1M1D138M3D25M8D7M13D74M -gi|157734152:29655295-29712160 56866 46651 47139 + gi|157734152:29655295-29712160 56866 31228 31696 418 497 0 NM:i:79 ms:i:560 AS:i:560 nn:i:0 tp:A:S cm:i:16 s1:i:161 de:f:0.1068 rl:i:96 cg:Z:47M1I148M7D1M2D3M1I15M2I1M1I138M3I25M8I7M13I74M -gi|157734152:29655295-29712160 56866 44580 44995 + gi|528476637:29857558-29915771 58214 886 1289 366 415 0 NM:i:49 ms:i:556 AS:i:556 nn:i:0 tp:A:S cm:i:12 s1:i:107 de:f:0.0941 rl:i:96 cg:Z:324M12I79M -gi|157734152:29655295-29712160 56866 44580 44995 + gi|528476637:29857558-29915771 58214 39378 39792 363 418 0 NM:i:55 ms:i:508 AS:i:508 nn:i:0 tp:A:S cm:i:7 s1:i:93 de:f:0.1232 rl:i:96 cg:Z:85M3I4M3D48M1I274M -gi|157734152:29655295-29712160 56866 44580 44995 + gi|157734152:29655295-29712160 56866 39500 39914 362 418 0 NM:i:56 ms:i:502 AS:i:502 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1256 rl:i:96 cg:Z:85M3I4M3D48M1I274M -gi|157734152:29655295-29712160 56866 39500 39914 + gi|157734152:29655295-29712160 56866 44580 44995 362 418 0 NM:i:56 ms:i:502 AS:i:502 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1256 rl:i:96 cg:Z:85M3D4M3I48M1D274M -gi|157734152:29655295-29712160 56866 39500 39914 + gi|528476637:29857558-29915771 58214 44457 44872 360 418 0 NM:i:58 ms:i:490 AS:i:490 nn:i:0 tp:A:S cm:i:6 s1:i:78 de:f:0.1304 rl:i:96 cg:Z:85M3D4M3I48M1D274M -gi|157734152:29655295-29712160 56866 7021 7639 + gi|528476637:29857558-29915771 58214 49208 49824 489 643 0 NM:i:154 ms:i:370 AS:i:370 nn:i:0 tp:A:S cm:i:5 s1:i:47 de:f:0.2049 rl:i:96 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D8M1I4M2D25M1D11M1I5M1I2M2D4M1I4M1I7M5D7M1D133M1D49M1D29M4D5M3I3M1I53M -gi|157734152:29655295-29712160 56866 7021 7639 + gi|157734152:29655295-29712160 56866 47858 48472 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4D20M1I64M2D7M1I1M1I39M9I5M2I5M4I75M2D9M1I3M2D25M1D11M1I5M1I3M1D8M1I7M3D7M1D90M1I5M1D37M1D49M1D30M4D4M3I3M1I53M -gi|157734152:29655295-29712160 56866 47858 48472 + gi|528476637:29857558-29915771 58214 7043 7661 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I9M1D3M2I25M1I11M1D5M1D3M1I8M1D7M3I7M1I90M1D5M1I37M1I49M1I30M4I4M3D3M1D53M -gi|157734152:29655295-29712160 56866 47858 48472 + gi|157734152:29655295-29712160 56866 7021 7639 488 641 0 NM:i:153 ms:i:364 AS:i:364 nn:i:0 tp:A:S cm:i:5 s1:i:48 de:f:0.2078 rl:i:96 cg:Z:26M4I20M1D64M2I7M1D1M1D39M9D5M2D5M4D75M2I9M1D3M2I25M1I11M1D5M1D3M1I8M1D7M3I7M1I90M1D5M1I37M1I49M1I30M4I4M3D3M1D53M -gi|157734152:29655295-29712160 56866 28499 28764 - gi|528476637:29857558-29915771 58214 29092 29357 235 265 41 NM:i:30 ms:i:350 AS:i:350 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1132 zd:i:2 rl:i:96 cg:Z:265M -gi|157734152:29655295-29712160 56866 14465 14764 - gi|528476637:29857558-29915771 58214 45149 45463 266 316 0 NM:i:50 ms:i:350 AS:i:350 nn:i:0 tp:A:S cm:i:3 s1:i:40 de:f:0.1192 rl:i:96 cg:Z:5M1I26M2D116M14D2M1D114M1I34M -gi|157734152:29655295-29712160 56866 29213 29478 - gi|528476637:29857558-29915771 58214 28378 28643 234 265 0 NM:i:31 ms:i:344 AS:i:344 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1170 zd:i:1 rl:i:96 cg:Z:265M -gi|157734152:29655295-29712160 56866 28499 28764 - gi|157734152:29655295-29712160 56866 29213 29478 233 265 40 NM:i:32 ms:i:338 AS:i:338 nn:i:0 tp:A:P cm:i:4 s1:i:46 s2:i:0 de:f:0.1208 zd:i:2 rl:i:96 cg:Z:265M -gi|157734152:29655295-29712160 56866 29213 29478 - gi|157734152:29655295-29712160 56866 28499 28764 233 265 0 NM:i:32 ms:i:338 AS:i:338 nn:i:0 tp:A:S cm:i:4 s1:i:46 de:f:0.1208 zd:i:1 rl:i:96 cg:Z:265M -gi|157734152:29655295-29712160 56866 17792 17978 + gi|157734152:29655295-29712160 56866 17883 18067 176 186 0 NM:i:10 ms:i:312 AS:i:312 nn:i:0 tp:A:S cm:i:11 s1:i:86 de:f:0.0486 rl:i:96 cg:Z:6M2I178M -gi|157734152:29655295-29712160 56866 17883 18067 + gi|157734152:29655295-29712160 56866 17792 17978 176 186 0 NM:i:10 ms:i:312 AS:i:312 nn:i:0 tp:A:S cm:i:11 s1:i:86 de:f:0.0486 rl:i:96 cg:Z:6M2D178M -gi|157734152:29655295-29712160 56866 6285 6982 - gi|528476637:29857558-29915771 58214 6307 7004 528 727 0 NM:i:199 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2392 rl:i:96 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M8I5M1I8M1I5M1I9M1D6M1D5M1D8M8D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M -gi|157734152:29655295-29712160 56866 6285 6982 - gi|157734152:29655295-29712160 56866 6285 6982 528 723 0 NM:i:195 ms:i:272 AS:i:272 nn:i:0 tp:A:S cm:i:4 s1:i:44 de:f:0.2436 rl:i:96 cg:Z:11M1D155M1I43M2D64M2I1M1I6M3I5M2I1M2I6M1D9M2I3M3D6M1I7M2D2M2I3M2D26M2I3M2D2M2I7M1D5M3I4M2D3M2D13M2D7M5D70M2I43M1D154M1I12M -gi|157734152:29655295-29712160 56866 8039 8361 + gi|157734152:29655295-29712160 56866 8039 8285 228 323 0 NM:i:95 ms:i:262 AS:i:281 nn:i:0 tp:A:S cm:i:8 s1:i:53 de:f:0.0769 rl:i:96 cg:Z:131M77I89M1D25M -gi|157734152:29655295-29712160 56866 8039 8285 + gi|157734152:29655295-29712160 56866 8039 8361 228 323 0 NM:i:95 ms:i:262 AS:i:281 nn:i:0 tp:A:S cm:i:8 s1:i:53 de:f:0.0769 rl:i:96 cg:Z:131M77D89M1I25M -gi|157734152:29655295-29712160 56866 46497 46603 - gi|157734152:29655295-29712160 56866 46497 46603 92 106 0 NM:i:14 ms:i:128 AS:i:128 nn:i:0 tp:A:S cm:i:4 s1:i:54 de:f:0.1321 rl:i:96 cg:Z:106M -gi|157734152:29655295-29712160 56866 8206 8392 + gi|157734152:29655295-29712160 56866 8003 8199 154 201 0 NM:i:47 ms:i:116 AS:i:116 nn:i:0 tp:A:S cm:i:5 s1:i:41 de:f:0.1979 rl:i:96 cg:Z:14M3D43M2I1M1I28M1D2M2D3M1D14M1D11M2D3M2D5M2I5M3D52M -gi|157734152:29655295-29712160 56866 8003 8199 + gi|157734152:29655295-29712160 56866 8206 8392 154 201 0 NM:i:47 ms:i:116 AS:i:116 nn:i:0 tp:A:S cm:i:5 s1:i:41 de:f:0.1979 rl:i:96 cg:Z:14M3I43M2D1M1D28M1I2M2I3M1I14M1I11M2I3M2I5M2D5M3I52M -gi|157734152:29655295-29712160 56866 46537 46603 - gi|157734152:29655295-29712160 56866 46537 46603 60 66 0 NM:i:6 ms:i:96 AS:i:96 nn:i:0 tp:A:S cm:i:4 s1:i:48 de:f:0.0909 rl:i:96 cg:Z:66M
--- a/test-data/tx_stats.tabular Mon Jun 14 18:01:05 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,501 +0,0 @@ -0 0 -1 0 -2 0 -3 0 -4 0 -5 0 -6 0 -7 0 -8 0 -9 0 -10 0 -11 0 -12 0 -13 0 -14 0 -15 0 -16 0 -17 0 -18 0 -19 0 -20 0 -21 0 -22 0 -23 0 -24 0 -25 0 -26 0 -27 0 -28 0 -29 0 -30 0 -31 0 -32 0 -33 0 -34 0 -35 0 -36 0 -37 0 -38 0 -39 0 -40 0 -41 0 -42 0 -43 0 -44 0 -45 0 -46 0 -47 0 -48 0 -49 0 -50 0 -51 0 -52 0 -53 0 -54 0 -55 0 -56 0 -57 0 -58 0 -59 0 -60 0 -61 0 -62 0 -63 0 -64 0 -65 0 -66 0 -67 0 -68 0 -69 0 -70 0 -71 0 -72 0 -73 0 -74 0 -75 0 -76 0 -77 0 -78 0 -79 0 -80 0 -81 0 -82 0 -83 0 -84 0 -85 0 -86 0 -87 0 -88 0 -89 0 -90 0 -91 0 -92 0 -93 0 -94 0 -95 0 -96 0 -97 0 -98 0 -99 0 -100 0 -101 0 -102 0 -103 0 -104 0 -105 0 -106 0 -107 0 -108 0 -109 0 -110 0 -111 0 -112 0 -113 0 -114 0 -115 0 -116 0 -117 0 -118 0 -119 0 -120 0 -121 0 -122 0 -123 0 -124 0 -125 0 -126 0 -127 0 -128 0 -129 0 -130 0 -131 0 -132 0 -133 0 -134 0 -135 0 -136 0 -137 0 -138 0 -139 0 -140 0 -141 0 -142 0 -143 0 -144 0 -145 0 -146 0 -147 0 -148 0 -149 0 -150 0 -151 0 -152 0 -153 0 -154 0 -155 0 -156 0 -157 0 -158 0 -159 0 -160 0 -161 0 -162 0 -163 0 -164 0 -165 0 -166 0 -167 0 -168 0 -169 0 -170 0 -171 0 -172 0 -173 0 -174 0 -175 0 -176 0 -177 0 -178 0 -179 0 -180 0 -181 0 -182 0 -183 0 -184 0 -185 0 -186 0 -187 0 -188 0 -189 0 -190 0 -191 0 -192 0 -193 0 -194 0 -195 0 -196 0 -197 0 -198 0 -199 0 -200 0 -201 0 -202 0 -203 0 -204 0 -205 0 -206 0 -207 0 -208 0 -209 0 -210 0 -211 0 -212 0 -213 0 -214 0 -215 0 -216 0 -217 0 -218 0 -219 0 -220 0 -221 0 -222 0 -223 0 -224 0 -225 0 -226 0 -227 0 -228 0 -229 0 -230 0 -231 0 -232 0 -233 0 -234 0 -235 0 -236 0 -237 0 -238 0 -239 0 -240 0 -241 0 -242 0 -243 0 -244 0 -245 0 -246 0 -247 0 -248 0 -249 0 -250 0 -251 0 -252 0 -253 0 -254 0 -255 0 -256 0 -257 0 -258 0 -259 0 -260 0 -261 0 -262 0 -263 0 -264 0 -265 0 -266 0 -267 0 -268 0 -269 0 -270 0 -271 0 -272 0 -273 0 -274 0 -275 0 -276 0 -277 0 -278 0 -279 0 -280 0 -281 0 -282 0 -283 0 -284 0 -285 0 -286 0 -287 0 -288 0 -289 0 -290 0 -291 0 -292 0 -293 0 -294 0 -295 0 -296 0 -297 0 -298 0 -299 0 -300 0 -301 0 -302 0 -303 0 -304 0 -305 0 -306 0 -307 0 -308 0 -309 0 -310 0 -311 0 -312 0 -313 0 -314 0 -315 0 -316 0 -317 0 -318 0 -319 0 -320 0 -321 0 -322 0 -323 0 -324 0 -325 0 -326 0 -327 0 -328 0 -329 0 -330 0 -331 0 -332 0 -333 0 -334 0 -335 0 -336 0 -337 0 -338 0 -339 0 -340 0 -341 0 -342 0 -343 0 -344 0 -345 0 -346 0 -347 0 -348 0 -349 0 -350 0 -351 0 -352 0 -353 0 -354 0 -355 0 -356 0 -357 0 -358 0 -359 0 -360 0 -361 0 -362 0 -363 0 -364 0 -365 0 -366 0 -367 0 -368 0 -369 0 -370 0 -371 0 -372 0 -373 0 -374 0 -375 0 -376 0 -377 0 -378 0 -379 0 -380 0 -381 0 -382 0 -383 0 -384 0 -385 0 -386 0 -387 0 -388 0 -389 0 -390 0 -391 0 -392 0 -393 0 -394 0 -395 0 -396 0 -397 0 -398 0 -399 0 -400 0 -401 0 -402 0 -403 0 -404 0 -405 0 -406 0 -407 0 -408 0 -409 0 -410 0 -411 0 -412 0 -413 0 -414 0 -415 0 -416 0 -417 0 -418 0 -419 0 -420 0 -421 0 -422 0 -423 0 -424 0 -425 0 -426 0 -427 0 -428 0 -429 0 -430 0 -431 0 -432 0 -433 0 -434 0 -435 0 -436 0 -437 0 -438 0 -439 0 -440 0 -441 0 -442 0 -443 0 -444 0 -445 0 -446 0 -447 0 -448 0 -449 0 -450 0 -451 0 -452 0 -453 0 -454 0 -455 0 -456 0 -457 0 -458 0 -459 0 -460 0 -461 0 -462 0 -463 0 -464 0 -465 0 -466 0 -467 0 -468 0 -469 0 -470 0 -471 0 -472 0 -473 0 -474 0 -475 0 -476 0 -477 0 -478 0 -479 0 -480 0 -481 0 -482 0 -483 0 -484 0 -485 0 -486 0 -487 0 -488 0 -489 0 -490 0 -491 0 -492 0 -493 0 -494 0 -495 0 -496 0 -497 0 -498 0 -499 0 -500 0