# HG changeset patch # User iuc # Date 1695630551 0 # Node ID dc1500f420733f2bfcdc78cd6e5aaaa08b26b529 # Parent 3a2f2e24c37efb8ebb61c32e1f3f1d163fdb3055 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pycoqc commit 6bada3b3ee8791dd7fc2689f8a6023313cb4a0c4 diff -r 3a2f2e24c37e -r dc1500f42073 macros.xml --- a/macros.xml Thu Mar 11 16:25:17 2021 +0000 +++ b/macros.xml Mon Sep 25 08:29:11 2023 +0000 @@ -25,6 +25,6 @@ *pycoqc* computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. ]]> `_. +More information are available on the `pycoQC website `_. ]]> diff -r 3a2f2e24c37e -r dc1500f42073 pycoqc.xml --- a/pycoqc.xml Thu Mar 11 16:25:17 2021 +0000 +++ b/pycoqc.xml Mon Sep 25 08:29:11 2023 +0000 @@ -1,6 +1,8 @@ - + + quality control for Nanopore sequencing data + macros.xml @@ -20,15 +22,15 @@ #end if --min_barcode_percent '$min_barcode_percent' --report_title '$report_title' -## TODO in future - --template_file -## TODO in future - --config_file +## can be implemented in future - --template_file +## can be implemented in future - --config_file #if $skip_coverage_plot '$skip_coverage_plot' #end if --sample '$sample' -## TODO in future --default_config +## can be implemented in future --default_config --summary_file '$summary_file' -## TODO in future --barcode_file +## can be implemented in future --barcode_file #if $bam_file: --bam_file '$bam_file' #end if