Mercurial > repos > iuc > pygenometracks

comparison macros.xml @ 8:4ac4e7083b7e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 3bfe22506f7d9922ac885ef6a6fbe8f96c83ed14"
author iuc
date Tue, 21 Jul 2020 03:32:48 -0400
parents 326a3db8d9d1
children 2824d77cd8f8
comparison
equal deleted inserted replaced
7:326a3db8d9d1 8:4ac4e7083b7e
1 <macros> 1 <macros>
2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token> 2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
3 <token name="@WRAPPER_VERSION@">3.3</token> 3 <token name="@WRAPPER_VERSION@">3.5</token>
4 <xml name="requirements"> 4 <xml name="requirements">
5 <requirements> 5 <requirements>
6 <requirement type="package" version="@WRAPPER_VERSION@">pygenometracks</requirement> 6 <requirement type="package" version="@WRAPPER_VERSION@">pygenometracks</requirement>
7 <yield /> 7 <yield />
8 </requirements> 8 </requirements>
110 </when> 110 </when>
111 <when value="point_option"> 111 <when value="point_option">
112 <param name="width_point" type="float" value="0.5" optional="True" label="Width"/> 112 <param name="width_point" type="float" value="0.5" optional="True" label="Width"/>
113 </when> 113 </when>
114 <when value="fill_option" /> 114 <when value="fill_option" />
115 </conditional>
116 </xml>
117 <xml name="logScale_coverage_macro">
118 <conditional name="logScale_conditional">
119 <param name="transform_selector" type="select" label="Choose a transformation">
120 <option value="no">no transformation</option>
121 <option value="log1p">log1p</option>
122 <option value="log">log</option>
123 <option value="log2">log2</option>
124 <option value="log10">log10</option>
125 <option value="-log">-log</option>
126 </param>
127 <when value="no"/>
128 <when value="log1p">
129 <param name="y_axis_values" type="boolean" truevalue="original" falsevalue="transformed" checked="false"
130 label="Use original values instead of transformed values." />
131 </when>
132 <when value="log">
133 <param name="log_pseudocount" type="float" value="0" label="pseudo count to add before applying log" />
134 <param name="y_axis_values" type="boolean" truevalue="original" falsevalue="transformed" checked="false"
135 label="Use original values instead of transformed values." />
136 </when>
137 <when value="log2">
138 <param name="log_pseudocount" type="float" value="0" label="pseudo count to add before applying log2" />
139 <param name="y_axis_values" type="boolean" truevalue="original" falsevalue="transformed" checked="false"
140 label="Use original values instead of transformed values." />
141 </when>
142 <when value="log10">
143 <param name="log_pseudocount" type="float" value="0" label="pseudo count to add before applying log10" />
144 <param name="y_axis_values" type="boolean" truevalue="original" falsevalue="transformed" checked="false"
145 label="Use original values instead of transformed values." />
146 </when>
147 <when value="-log">
148 <param name="log_pseudocount" type="float" value="0" label="pseudo count to add before applying -log" />
149 <param name="y_axis_values" type="boolean" truevalue="original" falsevalue="transformed" checked="false"
150 label="Use original values instead of transformed values." />
151 </when>
115 </conditional> 152 </conditional>
116 </xml> 153 </xml>
117 <xml name="border_color_bed_macro"> 154 <xml name="border_color_bed_macro">
118 <conditional name="border_color_bed"> 155 <conditional name="border_color_bed">
119 <param name="border_color_bed_select" type="select" label="Define border color:"> 156 <param name="border_color_bed_select" type="select" label="Define border color:">