Mercurial > repos > iuc > pygenometracks
comparison test-data/first.maf @ 11:7dd841a32245 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
author | iuc |
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date | Sat, 01 Oct 2022 08:43:22 +0000 |
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children |
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10:a1abfa420d9d | 11:7dd841a32245 |
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1 ##maf version=1 | |
2 a score=41100.0 | |
3 s mm10.chr2 34705072 4 + 182113224 G-AAG | |
4 s rn5.chr3 19096925 4 + 183740530 G-AAG | |
5 i rn5.chr3 C 0 C 0 | |
6 s hg19.chr9 13114691 4 - 141213431 G-ACA | |
7 i hg19.chr9 I 195 I 6 | |
8 | |
9 a score=423183.0 | |
10 s mm10.chr2 34705076 25 + 182113224 AGGTGGAGA-------ACTATAGAATTTGAAA | |
11 s rn5.chr3 19096929 25 + 183740530 AGGCAGAGA-------ACTGTGGAGTTTGAAA | |
12 i rn5.chr3 C 0 C 0 | |
13 s hg19.chr9 13114701 25 - 141213431 AAATAAAAG-------GCTGTAAATCTTGAAG | |
14 i hg19.chr9 I 6 C 0 | |
15 | |
16 a score=66158.0 | |
17 s mm10.chr2 34705101 4 + 182113224 GTCT | |
18 s rn5.chr3 19096954 4 + 183740530 GGCT | |
19 i rn5.chr3 C 0 C 0 | |
20 s hg19.chr9 13114726 4 - 141213431 TTCT | |
21 i hg19.chr9 C 0 C 0 | |
22 | |
23 a score=387811.0 | |
24 s mm10.chr2 34705105 18 + 182113224 AATATTGCTTTCA---GCAAA | |
25 s rn5.chr3 19096958 18 + 183740530 AATATTGCTTTCA---GCAAA | |
26 i rn5.chr3 C 0 C 0 | |
27 s hg19.chr9 13114730 18 - 141213431 AACACTGCTCTCA---GCAAA | |
28 i hg19.chr9 C 0 C 0 | |
29 | |
30 a score=10920.0 | |
31 s mm10.chr2 34705123 1 + 182113224 T | |
32 s rn5.chr3 19096976 1 + 183740530 T | |
33 i rn5.chr3 C 0 C 0 | |
34 s hg19.chr9 13114748 1 - 141213431 T | |
35 i hg19.chr9 C 0 C 0 | |
36 | |
37 a score=-29032.0 | |
38 s mm10.chr2 34705124 7 + 182113224 GTCTTGA--- | |
39 s rn5.chr3 19096977 7 + 183740530 GTCCTAA--- | |
40 i rn5.chr3 C 0 C 0 | |
41 s hg19.chr9 13114749 2 - 141213431 -----AA--- | |
42 i hg19.chr9 C 0 C 0 | |
43 | |
44 a score=-6898.0 | |
45 s mm10.chr2 34705131 8 + 182113224 TTTA------AAAA | |
46 s rn5.chr3 19096984 8 + 183740530 TTTT------AAAA | |
47 i rn5.chr3 C 0 C 0 | |
48 s hg19.chr9 13114751 8 - 141213431 CTTT------AAAA | |
49 i hg19.chr9 C 0 I 1 | |
50 | |
51 a score=37882.0 | |
52 s mm10.chr2 34705139 24 + 182113224 AAAAATCTATGAGTGAAATG---AATA | |
53 s rn5.chr3 19096992 23 + 183740530 CGAATTC-ATGAATGAAATG---AATA | |
54 i rn5.chr3 C 0 C 0 | |
55 s hg19.chr9 13114760 24 - 141213431 AGATAAGTATGCAGAGGATG---GAAA | |
56 i hg19.chr9 I 1 C 0 | |
57 | |
58 a score=2589.0 | |
59 s mm10.chr2 34705163 1 + 182113224 T | |
60 s rn5.chr3 19097015 1 + 183740530 T | |
61 i rn5.chr3 C 0 C 0 | |
62 s hg19.chr9 13114784 1 - 141213431 T | |
63 i hg19.chr9 C 0 C 0 | |
64 | |
65 a score=-36380.0 | |
66 s mm10.chr2 34705164 35 + 182113224 ATAATGCCATGAAAT--TGACTCTA-ATTTCT-AAATGT | |
67 s rn5.chr3 19097016 30 + 183740530 ATAATGCCACG-AAT--TAACTCTA-ATTTCT-AA---- | |
68 i rn5.chr3 C 0 C 0 | |
69 s hg19.chr9 13114785 32 - 141213431 -TTCAAACATAAAA---AAATTATT-A-ATCT-AAATGT | |
70 i hg19.chr9 C 0 C 0 | |
71 | |
72 a score=33050.0 | |
73 s mm10.chr2 34705199 17 + 182113224 ACTA-TTTTA--GACTACAG | |
74 s rn5.chr3 19097046 14 + 183740530 ---A-TCTTA--GACTACAG | |
75 i rn5.chr3 C 0 C 0 | |
76 s hg19.chr9 13114817 13 - 141213431 -----TTTTA--GTCTGAAG | |
77 i hg19.chr9 C 0 I 3470 | |
78 | |
79 a score=548.0 | |
80 s mm10.chr2 34705216 11 + 182113224 AACTCCCCCTC-- | |
81 s rn5.chr3 19097060 11 + 183740530 AACCCCCACTC-- | |
82 i rn5.chr3 C 0 C 0 | |
83 | |
84 a score=-4856.0 | |
85 s mm10.chr2 34705227 6 + 182113224 CCCAAA- | |
86 s rn5.chr3 19097071 6 + 183740530 CCAAAA- | |
87 i rn5.chr3 C 0 C 0 | |
88 | |
89 a score=87104.0 | |
90 s mm10.chr2 34705233 20 + 182113224 AGATAACCCTAACTAAGCAT | |
91 s rn5.chr3 19097077 16 + 183740530 AGATACCC----CTAAGCAC | |
92 i rn5.chr3 C 0 C 0 | |
93 | |
94 a score=1769.0 | |
95 s mm10.chr2 34705253 1 + 182113224 G | |
96 s rn5.chr3 19097093 1 + 183740530 G | |
97 i rn5.chr3 C 0 C 0 | |
98 | |
99 a score=-7449.0 | |
100 s mm10.chr2 34705254 3 + 182113224 TCT-- | |
101 s rn5.chr3 19097094 3 + 183740530 TCT-- | |
102 i rn5.chr3 C 0 C 0 | |
103 | |
104 a score=-9682.0 | |
105 s mm10.chr2 34705257 3 + 182113224 TAA | |
106 s rn5.chr3 19097097 3 + 183740530 TAA | |
107 i rn5.chr3 C 0 C 0 | |
108 | |
109 a score=45039.0 | |
110 s mm10.chr2 34705260 9 + 182113224 CACAACTAG | |
111 s rn5.chr3 19097100 9 + 183740530 CACAATTAG | |
112 i rn5.chr3 C 0 C 0 | |
113 | |
114 a score=4300.0 | |
115 s mm10.chr2 34705269 1 + 182113224 A | |
116 s rn5.chr3 19097109 1 + 183740530 A | |
117 i rn5.chr3 C 0 C 0 | |
118 | |
119 a score=135112.0 | |
120 s mm10.chr2 34705270 16 + 182113224 AA-T------ATTAAAATAG----GTA | |
121 s rn5.chr3 19097110 16 + 183740530 AA-T------ATTAAAATAG----GTA | |
122 i rn5.chr3 C 0 C 0 | |
123 | |
124 a score=171803.0 | |
125 s mm10.chr2 34705286 14 + 182113224 AGTATACAGAGACT | |
126 s rn5.chr3 19097126 14 + 183740530 AGTATAAAGATACC | |
127 i rn5.chr3 C 0 C 0 | |
128 | |
129 a score=59500.0 | |
130 s mm10.chr2 34705300 4 + 182113224 AAAA | |
131 s rn5.chr3 19097140 4 + 183740530 AAAA | |
132 i rn5.chr3 C 0 I 99 | |
133 s hg19.chr9 13118300 4 - 141213431 ggac | |
134 i hg19.chr9 I 3470 C 0 | |
135 | |
136 a score=26234.0 | |
137 s mm10.chr2 34705304 2 + 182113224 CT | |
138 s rn5.chr3 19097243 2 + 183740530 CT | |
139 i rn5.chr3 I 99 C 0 | |
140 s hg19.chr9 13118304 2 - 141213431 tt | |
141 i hg19.chr9 C 0 C 0 | |
142 | |
143 a score=4664.0 | |
144 s mm10.chr2 34705306 1 + 182113224 T | |
145 s rn5.chr3 19097245 1 + 183740530 T | |
146 i rn5.chr3 C 0 C 0 | |
147 | |
148 a score=10920.0 | |
149 s mm10.chr2 34705307 1 + 182113224 T | |
150 s rn5.chr3 19097246 1 + 183740530 T | |
151 i rn5.chr3 C 0 C 0 | |
152 s hg19.chr9 13118306 1 - 141213431 t | |
153 i hg19.chr9 C 0 C 0 | |
154 | |
155 a score=10500.0 | |
156 s mm10.chr2 34705308 1 + 182113224 C | |
157 s rn5.chr3 19097247 1 + 183740530 C | |
158 i rn5.chr3 C 0 C 0 | |
159 s hg19.chr9 13118307 1 - 141213431 c | |
160 i hg19.chr9 C 0 C 0 | |
161 | |
162 a score=1320.0 | |
163 s mm10.chr2 34705309 14 + 182113224 TCCACTCACGGATT---- | |
164 s rn5.chr3 19097248 14 + 183740530 TCCATTCATGGatt---- | |
165 i rn5.chr3 C 0 C 0 | |
166 s hg19.chr9 13118308 18 - 141213431 tctacacatggaattttt | |
167 i hg19.chr9 C 0 C 0 | |
168 | |
169 a score=8456.0 | |
170 s mm10.chr2 34705323 15 + 182113224 TCCTTATAACAGATT | |
171 s rn5.chr3 19097262 15 + 183740530 tcattatgacagatt | |
172 i rn5.chr3 C 0 C 0 | |
173 s hg19.chr9 13118326 15 - 141213431 tcattatgactgaca | |
174 i hg19.chr9 C 0 C 0 | |
175 | |
176 a score=352.0 | |
177 s mm10.chr2 34705338 11 + 182113224 TCTAGAAGTAG--- | |
178 s hg19.chr9 13118341 11 - 141213431 cctagaagtgg--- | |
179 i hg19.chr9 C 0 C 0 | |
180 | |
181 a score=25195.0 | |
182 s mm10.chr2 34705349 194 + 182113224 TTCT-------------------TTTTTTTCCCCGCCTtttttttgagacagggtttctctgtgtagatcttg-------gctgtcctggaactcact--ctgtagac-caggctggccttgaactcagaaatccgcctgcctctgcctctgcctctgcctcccaagtgctgggattaaaggcttgcagcaccactgcctggcCtttttt-------ttttttttaaaga | |
183 | |
184 a score=0.0 | |
185 s mm10.chr2 34705543 173 + 182113224 tttattattatttatatgtaagtacactgtagctatcctcagacacaccagtagagggcatcagatgtcatttcagatggttgtaaaccaccatgtggttgctaggatttgaactcaggaccttcattagaacagtcagtgctcttaaccgctgaaccatctctccagccccC | |
186 | |
187 a score=1419.0 | |
188 s mm10.chr2 34705716 5 + 182113224 TCTAG | |
189 s rn5.chr3 19097277 5 + 183740530 tctag | |
190 i rn5.chr3 C 0 C 0 | |
191 | |
192 a score=23757.0 | |
193 s mm10.chr2 34705721 71 + 182113224 AAGTAGTTCTAACTGATCCAAATTTAGAATATGATCATCTAAGTCCCCAAGAACACATTGACAAGTTATGC | |
194 s rn5.chr3 19097282 71 + 183740530 aagtagttctaactgaaccaaatttagaatatgaacatttaagtccccacgtacacactgacaagttatgc | |
195 i rn5.chr3 C 0 I 271 | |
196 s hg19.chr9 13118352 65 - 141213431 ------aactaacctgactaaatttagaatgtgaacatttaagaccttaaatagatactgacaaagtatgt | |
197 i hg19.chr9 C 0 C 0 | |
198 | |
199 a score=1587.0 | |
200 s mm10.chr2 34705792 4 + 182113224 CCCA | |
201 s rn5.chr3 19097624 4 + 183740530 CCTG | |
202 i rn5.chr3 I 271 C 0 | |
203 s hg19.chr9 13118417 4 - 141213431 ccca | |
204 i hg19.chr9 C 0 I 76 | |
205 | |
206 a score=1744.0 | |
207 s mm10.chr2 34705796 49 + 182113224 CTTTGATTTTTAGGGCTTTGTTTT--GGTTGTTTTAGGATTTTTTTTTCTC | |
208 s rn5.chr3 19097628 51 + 183740530 CTTTGTTTTGTAGGAttttgcttttgggttttttcttctcttttttctttc | |
209 i rn5.chr3 C 0 C 0 | |
210 | |
211 a score=-3038.0 | |
212 s mm10.chr2 34705845 83 + 182113224 CTTTTT----CTTTCGTttttggttttttggatcaggactcactatgtagact-tggctgacctagaactcactatgtagaccaggca | |
213 s rn5.chr3 19097679 83 + 183740530 tttttt----gttttttttttttttttttggataaaggctcactctacagact-tggctgacttggaactcactatgtaagccaggca | |
214 i rn5.chr3 C 0 C 0 | |
215 | |
216 a score=-8755.0 | |
217 s mm10.chr2 34705928 42 + 182113224 agtctcaaactcatagatattccctg----gcctctatct---gagttc | |
218 s rn5.chr3 19097762 45 + 183740530 aatcttaaactcacagataatcccct----gcctccacctcctgagtgc | |
219 i rn5.chr3 C 0 C 0 | |
220 | |
221 a score=1299.0 | |
222 s mm10.chr2 34705970 3 + 182113224 tga | |
223 s rn5.chr3 19097807 3 + 183740530 tga | |
224 i rn5.chr3 C 0 C 0 | |
225 | |
226 a score=-2713.0 | |
227 s mm10.chr2 34705973 5 + 182113224 cattC | |
228 s rn5.chr3 19097810 5 + 183740530 tacaa | |
229 i rn5.chr3 C 0 C 0 | |
230 | |
231 a score=6695.0 | |
232 s mm10.chr2 34705978 1 + 182113224 T | |
233 s rn5.chr3 19097815 1 + 183740530 t | |
234 i rn5.chr3 C 0 C 0 | |
235 | |
236 a score=395.0 | |
237 s mm10.chr2 34705979 1 + 182113224 A | |
238 s rn5.chr3 19097816 1 + 183740530 a | |
239 i rn5.chr3 C 0 C 0 | |
240 | |
241 a score=28965.0 | |
242 s mm10.chr2 34705980 8 + 182113224 TAATTACC | |
243 s rn5.chr3 19097817 8 + 183740530 tgaTTACC | |
244 i rn5.chr3 C 0 C 0 | |
245 | |
246 a score=12376.0 | |
247 s mm10.chr2 34705988 1 + 182113224 T | |
248 s rn5.chr3 19097825 1 + 183740530 T | |
249 i rn5.chr3 C 0 C 0 | |
250 | |
251 a score=12907.0 | |
252 s mm10.chr2 34705989 1 + 182113224 T | |
253 s rn5.chr3 19097826 1 + 183740530 T | |
254 i rn5.chr3 C 0 C 0 | |
255 | |
256 a score=258.0 | |
257 s mm10.chr2 34705990 1 + 182113224 A | |
258 s rn5.chr3 19097827 1 + 183740530 A | |
259 i rn5.chr3 C 0 C 0 | |
260 | |
261 a score=29575.0 | |
262 s mm10.chr2 34705991 1 + 182113224 A | |
263 s rn5.chr3 19097828 1 + 183740530 A | |
264 i rn5.chr3 C 0 C 0 | |
265 | |
266 a score=18893.0 | |
267 s mm10.chr2 34705992 1 + 182113224 A | |
268 s rn5.chr3 19097829 1 + 183740530 A | |
269 i rn5.chr3 C 0 C 0 | |
270 | |
271 a score=395908.0 | |
272 s mm10.chr2 34705993 19 + 182113224 A-------AGCCATTCT------CACTCCTAC | |
273 s rn5.chr3 19097830 19 + 183740530 A-------GGTCATTCT------CACCCCCAC | |
274 i rn5.chr3 C 0 C 0 | |
275 s hg19.chr9 13118497 19 - 141213431 A-------AGTCATCCT------CATTTCCCC | |
276 i hg19.chr9 I 76 C 0 | |
277 s sorAra1.scaffold_258498 5366 18 + 196505 A-------AGCCcctct------ttttcca-t | |
278 i sorAra1.scaffold_258498 N 0 C 0 | |
279 | |
280 a score=11678.0 | |
281 s mm10.chr2 34706012 1 + 182113224 A | |
282 s rn5.chr3 19097849 1 + 183740530 A | |
283 i rn5.chr3 C 0 C 0 | |
284 s hg19.chr9 13118516 1 - 141213431 C | |
285 i hg19.chr9 C 0 C 0 | |
286 s sorAra1.scaffold_258498 5384 1 + 196505 t | |
287 i sorAra1.scaffold_258498 C 0 C 0 | |
288 | |
289 a score=41513.0 | |
290 s mm10.chr2 34706013 1 + 182113224 A | |
291 s rn5.chr3 19097850 1 + 183740530 A | |
292 i rn5.chr3 C 0 C 0 | |
293 s hg19.chr9 13118517 1 - 141213431 T | |
294 i hg19.chr9 C 0 C 0 | |
295 s sorAra1.scaffold_258498 5385 1 + 196505 t | |
296 i sorAra1.scaffold_258498 C 0 C 0 | |
297 | |
298 a score=154000.0 | |
299 s mm10.chr2 34706014 1 + 182113224 C | |
300 s rn5.chr3 19097851 1 + 183740530 C | |
301 i rn5.chr3 C 0 C 0 | |
302 s hg19.chr9 13118518 1 - 141213431 C | |
303 i hg19.chr9 C 0 C 0 | |
304 s sorAra1.scaffold_258498 5386 1 + 196505 c | |
305 i sorAra1.scaffold_258498 C 0 C 0 | |
306 | |
307 a score=98483.0 | |
308 s mm10.chr2 34706015 1 + 182113224 T | |
309 s rn5.chr3 19097852 1 + 183740530 T | |
310 i rn5.chr3 C 0 C 0 | |
311 s hg19.chr9 13118519 1 - 141213431 T | |
312 i hg19.chr9 C 0 C 0 | |
313 s sorAra1.scaffold_258498 5387 1 + 196505 t | |
314 i sorAra1.scaffold_258498 C 0 C 0 | |
315 | |
316 a score=13020051.0 | |
317 s mm10.chr2 34706016 111 + 182113224 T--ACCATGGGCTATGTCATCCATATCT--GGACTAGTTACA-GAATCTTTGCCCCC-AAAATCA-GAGCTGCACTCAGA-TCTCAGGTCTTCGATCTTATTGGGAATATCCTCCGATG | |
318 s rn5.chr3 19097853 111 + 183740530 T--ACCATGGGCTATGTCATCCACATCT--GGACTAGTTACA-GAATCTTTACCCCC-AAAATCA-GAGCTGCACTCAGA-TCGCAGGTCTTCGATCTTATTGGGAATATCCTCCGATG | |
319 i rn5.chr3 C 0 C 0 | |
320 s hg19.chr9 13118520 111 - 141213431 T--ACCGTGAGTTATTTCATCCATGTCT--GGACTAGTGACA-GAATCTTTACCCCC-AAAATCA-GAGCTGCACTCAGA-TCTCAGGTCTTCAATCTTATTGGGAATATCCTCAGAGG | |
321 i hg19.chr9 C 0 C 0 | |
322 s sorAra1.scaffold_258498 5388 111 + 196505 t--accATGAGTTACTTCATCCATGTCT--GGGCTAGTGACA-GAGTCTTTACCCCC-AAAGTCA-GAGCTGCACTCAGA-TCTCAGGTCTTCTATCTTATTAGGAATATCCTCAGAGG | |
323 i sorAra1.scaffold_258498 C 0 C 0 | |
324 | |
325 a score=1769347.0 | |
326 s mm10.chr2 34706127 14 + 182113224 TAGCACTTATACCT | |
327 s rn5.chr3 19097964 14 + 183740530 TAGCGCTTATGCCT | |
328 i rn5.chr3 C 0 C 0 | |
329 s hg19.chr9 13118631 14 - 141213431 TTGCACTTATGCCT | |
330 i hg19.chr9 C 0 C 0 | |
331 s sorAra1.scaffold_258498 5499 14 + 196505 TTGCACTTATgcct | |
332 i sorAra1.scaffold_258498 C 0 C 0 | |
333 | |
334 a score=-78567.0 | |
335 s mm10.chr2 34706141 7 + 182113224 TTAAA-------------------AA----- | |
336 s rn5.chr3 19097978 7 + 183740530 TTGAA-------------------AA----- | |
337 i rn5.chr3 C 0 C 0 | |
338 s hg19.chr9 13118645 7 - 141213431 TTAAA-------------------AA----- | |
339 i hg19.chr9 C 0 C 0 | |
340 s sorAra1.scaffold_258498 5513 6 + 196505 tt-aa-------------------ag----- | |
341 i sorAra1.scaffold_258498 C 0 C 0 | |
342 | |
343 a score=-435240.0 | |
344 s mm10.chr2 34706148 8 + 182113224 ATACAGCA-------------------------------------- | |
345 s rn5.chr3 19097985 7 + 183740530 -TACAGCA-------------------------------------- | |
346 i rn5.chr3 C 0 C 0 | |
347 s hg19.chr9 13118652 1 - 141213431 -------A-------------------------------------- | |
348 i hg19.chr9 C 0 C 0 | |
349 | |
350 a score=-126692.0 | |
351 s mm10.chr2 34706156 2 + 182113224 A-A- | |
352 s rn5.chr3 19097992 2 + 183740530 A-A- | |
353 i rn5.chr3 C 0 C 0 | |
354 s hg19.chr9 13118653 2 - 141213431 C-A- | |
355 i hg19.chr9 C 0 C 0 | |
356 s sorAra1.scaffold_258498 5519 2 + 196505 a-t- | |
357 i sorAra1.scaffold_258498 C 0 C 0 | |
358 | |
359 a score=-311071.0 | |
360 s mm10.chr2 34706158 6 + 182113224 A-A----TACA-- | |
361 s rn5.chr3 19097994 5 + 183740530 A------TACA-- | |
362 i rn5.chr3 C 0 C 0 | |
363 s hg19.chr9 13118655 3 - 141213431 A--------TA-- | |
364 i hg19.chr9 C 0 C 0 | |
365 s sorAra1.scaffold_258498 5521 3 + 196505 a--------aa-- | |
366 i sorAra1.scaffold_258498 C 0 C 0 | |
367 | |
368 a score=-651211.0 | |
369 s mm10.chr2 34706164 10 + 182113224 TA--A--G----------------------------------------------------------------------------------------------TAAA--TA | |
370 s rn5.chr3 19097999 10 + 183740530 GA--A--G----------------------------------------------------------------------------------------------TAAA--TA | |
371 i rn5.chr3 C 0 C 0 | |
372 s hg19.chr9 13118658 10 - 141213431 GT--A--A----------------------------------------------------------------------------------------------AAAA--TA | |
373 i hg19.chr9 C 0 C 0 | |
374 s sorAra1.scaffold_258498 5524 12 + 196505 at--a--a--------------------------------------------------------------------------------------------ttaaaa--ct | |
375 i sorAra1.scaffold_258498 C 0 C 0 | |
376 | |
377 a score=165149.0 | |
378 s mm10.chr2 34706174 5 + 182113224 AATAA | |
379 s rn5.chr3 19098009 4 + 183740530 AACA- | |
380 i rn5.chr3 C 0 C 0 | |
381 s hg19.chr9 13118668 4 - 141213431 AACA- | |
382 i hg19.chr9 C 0 C 0 | |
383 s sorAra1.scaffold_258498 5536 2 + 196505 a--a- | |
384 i sorAra1.scaffold_258498 C 0 C 0 | |
385 | |
386 a score=386714.0 | |
387 s mm10.chr2 34706179 12 + 182113224 GCTGCAAG----AAGA-------- | |
388 s rn5.chr3 19098013 9 + 183740530 ---GCAAG----AAGA-------- | |
389 i rn5.chr3 C 0 C 0 | |
390 s hg19.chr9 13118672 9 - 141213431 ---GGAAG----AAGA-------- | |
391 i hg19.chr9 C 0 C 0 | |
392 s sorAra1.scaffold_258498 5538 13 + 196505 ---gcAAACTGGAACA-------- | |
393 i sorAra1.scaffold_258498 C 0 C 0 | |
394 | |
395 a score=224266.0 | |
396 s mm10.chr2 34706191 6 + 182113224 CCAAAG-- | |
397 s rn5.chr3 19098022 6 + 183740530 ACAAAG-- | |
398 i rn5.chr3 C 0 C 0 | |
399 s hg19.chr9 13118681 6 - 141213431 ACAAAA-- | |
400 i hg19.chr9 C 0 C 0 | |
401 s sorAra1.scaffold_258498 5551 6 + 196505 ACAAAA-- | |
402 i sorAra1.scaffold_258498 C 0 C 0 | |
403 | |
404 a score=584015.0 | |
405 s mm10.chr2 34706197 35 + 182113224 TAGTTACAC-------AA---------------------------------------------------------------------------------A--ATTT--TATG---------AAG--TT-------------------------------T-GGAGAAA----------------------------------------------------TT-- | |
406 s rn5.chr3 19098028 36 + 183740530 CAGTTACAC-------AA---------------------------------------------------------------------------------A--ATTC--TACT---------AAG--TT-------------------------------TTGGATAAA----------------------------------------------------TC-- | |
407 i rn5.chr3 C 0 C 0 | |
408 s hg19.chr9 13118687 36 - 141213431 TATCCACAC-A-----AA---------------------------------------------------------------------------------A--AGTA--TATG---------AAA--TT-------------------------------T-GGAGAAA----------------------------------------------------CT-- | |
409 i hg19.chr9 C 0 I 4 | |
410 s sorAra1.scaffold_258498 5557 36 + 196505 TAAGCACAC-A-----GA---------------------------------------------------------------------------------A--AGTT--TATG---------AAG--TC-------------------------------T-GGAGAAA----------------------------------------------------GT-- | |
411 i sorAra1.scaffold_258498 C 0 I 4 | |
412 | |
413 a score=-1110372.0 | |
414 s mm10.chr2 34706232 43 + 182113224 CCTTTTC-------------------------------------------------AAA---CT--A---TC--CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAC------ATGTGA-GTTGCTGAGTGCT-------- | |
415 s rn5.chr3 19098064 37 + 183740530 CCTCCTC-------------------------------------------------GAG---CT--G---TC--CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTGA-GCTGCCGAGTGCT-------- | |
416 i rn5.chr3 C 0 C 0 | |
417 s hg19.chr9 13118727 47 - 141213431 CATTCTC-------------------------------------------------GAA---TT--T---TG--T----------------------------GTCCCAGT--TC------------------------------------------------------------------------------------------------------------------------TATAC------ATGTGA----GTTTAGTATT-------- | |
418 i hg19.chr9 I 4 C 0 | |
419 s sorAra1.scaffold_258498 5597 51 + 196505 TACCCTC-------------------------------------------------AATT--GT--T---TG--T----------------------------GTCCAGTTC-TA------------------------------------------------------------------------------------------------------------------------CACAC------AAGGGA-GCTG-CCGGTGTT-------- | |
420 i sorAra1.scaffold_258498 I 4 C 0 | |
421 | |
422 a score=-57305.0 | |
423 s mm10.chr2 34706275 9 + 182113224 G-------------------GCAAGTTA | |
424 s rn5.chr3 19098101 9 + 183740530 G-------------------CCACCTCA | |
425 i rn5.chr3 C 0 C 0 | |
426 | |
427 a score=-785463.0 | |
428 s mm10.chr2 34706284 23 + 182113224 CCAC--------------------------------------------------------------------------TGTTA----TTCAAACACACT----TA----------- | |
429 s rn5.chr3 19098110 23 + 183740530 CCAC--------------------------------------------------------------------------TGCTG----TCCAAGTACACT----TA----------- | |
430 i rn5.chr3 C 0 C 0 | |
431 s hg19.chr9 13118774 35 - 141213431 -------------------------------------------------------ATATCCTT---TA-T-GGTA--CTACTG----CTTAAATATACT----TA----------- | |
432 i hg19.chr9 C 0 C 0 | |
433 s sorAra1.scaffold_258498 5648 36 + 196505 -------------------------------------------------------TCGGCTTT---TATC-AGTA--CTACTG----CTTAAATATGAT----TA----------- | |
434 i sorAra1.scaffold_258498 C 0 C 0 | |
435 | |
436 a score=38342.0 | |
437 s mm10.chr2 34706307 6 + 182113224 TCTTGC- | |
438 s rn5.chr3 19098133 6 + 183740530 TCTTGC- | |
439 i rn5.chr3 C 0 C 0 | |
440 s hg19.chr9 13118809 6 - 141213431 CCTTGC- | |
441 i hg19.chr9 C 0 C 0 | |
442 s sorAra1.scaffold_258498 5684 5 + 196505 C-CCGA- | |
443 i sorAra1.scaffold_258498 C 0 C 0 | |
444 | |
445 a score=173064.0 | |
446 s mm10.chr2 34706313 10 + 182113224 T-TTATACAAT | |
447 s rn5.chr3 19098139 8 + 183740530 T---ATACAGC | |
448 i rn5.chr3 C 0 C 0 | |
449 s hg19.chr9 13118815 10 - 141213431 T-TTACACAAC | |
450 i hg19.chr9 C 0 C 0 | |
451 s sorAra1.scaffold_258498 5689 7 + 196505 T-GTGTGC--- | |
452 i sorAra1.scaffold_258498 C 0 C 0 | |
453 | |
454 a score=110922.0 | |
455 s mm10.chr2 34706323 13 + 182113224 ATCATC------------------------------------------AGA---ATT-A | |
456 s rn5.chr3 19098147 13 + 183740530 AGCATC------------------------------------------AAA---AGT-T | |
457 i rn5.chr3 C 0 C 0 | |
458 s hg19.chr9 13118825 13 - 141213431 ATAATC------------------------------------------AGA---ATC-G | |
459 i hg19.chr9 C 0 C 0 | |
460 s sorAra1.scaffold_258498 5696 12 + 196505 -AAAAT------------------------------------------ATC---CAA-G | |
461 i sorAra1.scaffold_258498 C 0 I 1 | |
462 | |
463 a score=-155855.0 | |
464 s mm10.chr2 34706336 16 + 182113224 CACGC----T----ATAC-----CTAAAT | |
465 s rn5.chr3 19098160 15 + 183740530 CATGC----T----GTAC-----CTAA-T | |
466 i rn5.chr3 C 0 C 0 | |
467 s hg19.chr9 13118838 14 - 141213431 --TAC----A----ATTC-----TAAAGT | |
468 i hg19.chr9 C 0 C 0 | |
469 s sorAra1.scaffold_258498 5709 16 + 196505 TACAT----G----CTCT-----GTACAC | |
470 i sorAra1.scaffold_258498 I 1 I 5 | |
471 | |
472 a score=5448.0 | |
473 s mm10.chr2 34706352 3 + 182113224 ATC | |
474 s rn5.chr3 19098175 3 + 183740530 ATT | |
475 i rn5.chr3 C 0 C 0 | |
476 | |
477 a score=-7915.0 | |
478 s mm10.chr2 34706355 2 + 182113224 GT- | |
479 s rn5.chr3 19098178 2 + 183740530 GT- | |
480 i rn5.chr3 C 0 C 0 | |
481 | |
482 a score=592160.0 | |
483 s mm10.chr2 34706357 20 + 182113224 AGCAAAAGC-----TAT-CAAAAA----TA | |
484 s rn5.chr3 19098180 20 + 183740530 AGCAGAAGC-----TAC-CAAAAG----TA | |
485 i rn5.chr3 C 0 C 0 | |
486 s hg19.chr9 13118852 20 - 141213431 AGGACAGGC-----TAC-TAAGAA----CA | |
487 i hg19.chr9 C 0 C 0 | |
488 s sorAra1.scaffold_258498 5730 20 + 196505 AGCAGAAGC-----TAT-GCAGTA----CA | |
489 i sorAra1.scaffold_258498 I 5 C 0 | |
490 | |
491 a score=-246926.0 | |
492 s mm10.chr2 34706377 6 + 182113224 TCA-----A--------GA | |
493 s rn5.chr3 19098200 6 + 183740530 TCG-----A--------AA | |
494 i rn5.chr3 C 0 C 0 | |
495 s hg19.chr9 13118872 6 - 141213431 GAA-----A--------CA | |
496 i hg19.chr9 C 0 C 0 | |
497 s sorAra1.scaffold_258498 5750 4 + 196505 GAT-----A---------- | |
498 i sorAra1.scaffold_258498 C 0 C 0 | |
499 | |
500 a score=-935672.0 | |
501 s mm10.chr2 34706383 18 + 182113224 GCTG------------------AA--------AG---AGGAG-----------------------CAGCA | |
502 s rn5.chr3 19098206 17 + 183740530 GCTG------------------AA---------G---AAGAA-----------------------CAGTT | |
503 i rn5.chr3 C 0 C 0 | |
504 s hg19.chr9 13118878 17 - 141213431 GTTG------------------TA---------G---AGAGA-----------------------CTGTT | |
505 i hg19.chr9 C 0 C 0 | |
506 s sorAra1.scaffold_258498 5754 20 + 196505 ----------------------GT---------C---AGGGAA---CA---CAC-----A-----TGAGC | |
507 i sorAra1.scaffold_258498 C 0 C 0 | |
508 | |
509 a score=499767.0 | |
510 s mm10.chr2 34706401 25 + 182113224 CGTCCA--TTATTTT----AACAGGCTGTA--A | |
511 s rn5.chr3 19098223 23 + 183740530 CGTCAG--TTATC------AATAGGCTGTG--A | |
512 i rn5.chr3 C 0 C 0 | |
513 s hg19.chr9 13118895 26 - 141213431 TGCCAA--TTACTTC----AACAGGCTCCAT-A | |
514 i hg19.chr9 C 0 C 0 | |
515 s sorAra1.scaffold_258498 5774 26 + 196505 TGCAAA--TTACTTT----AATGAGCTCTGC-G | |
516 i sorAra1.scaffold_258498 C 0 C 0 | |
517 | |
518 a score=767553.0 | |
519 s mm10.chr2 34706426 54 + 182113224 A----AGC------CACATATT--AAGTT----CTCAAAGA----TTAT------------G-AAG-GCATAAAATTAAT-TTTTTTCC | |
520 s rn5.chr3 19098246 54 + 183740530 A----AGC------TACACATT--AGGTT----CTCAAAGA----TTAT------------G-AAA-GCGTAAAATTGAT-TTTGTTCC | |
521 i rn5.chr3 C 0 C 0 | |
522 s hg19.chr9 13118921 55 - 141213431 A----GGC------CACACATT--AAGTT----CTCAAAGAT---TTCA------------G-GTG-CAATGGAAATAAG-TTTGTTTT | |
523 i hg19.chr9 C 0 C 0 | |
524 s sorAra1.scaffold_258498 5800 55 + 196505 A----AGC------CGCACATT--AAGCT----CTCATAGCT---ATTT------------G-GTA-CCCTAGAAATAAT-TTCATTCC | |
525 i sorAra1.scaffold_258498 C 0 C 0 | |
526 | |
527 a score=512662.0 | |
528 s mm10.chr2 34706480 12 + 182113224 CTGG-GGACTACT | |
529 s rn5.chr3 19098300 12 + 183740530 CTGG-AGACTACT | |
530 i rn5.chr3 C 0 C 0 | |
531 s hg19.chr9 13118976 12 - 141213431 CTGG-AAATTACT | |
532 i hg19.chr9 C 0 C 0 | |
533 s sorAra1.scaffold_258498 5855 12 + 196505 CTGG-AAATCACC | |
534 i sorAra1.scaffold_258498 C 0 C 0 | |
535 | |
536 a score=266794.0 | |
537 s mm10.chr2 34706492 19 + 182113224 GAG-AACTTAAATAA-CATA--T | |
538 s rn5.chr3 19098312 19 + 183740530 GAG-CTCTTAAATAA-CACA--T | |
539 i rn5.chr3 C 0 C 0 | |
540 s hg19.chr9 13118988 19 - 141213431 CAG-CTCTTAAATAT-AACA--T | |
541 i hg19.chr9 C 0 I 2 | |
542 s sorAra1.scaffold_258498 5867 1 + 196505 C---------------------- | |
543 i sorAra1.scaffold_258498 C 0 C 0 | |
544 | |
545 a score=43661.0 | |
546 s mm10.chr2 34706511 4 + 182113224 CT--CT | |
547 s rn5.chr3 19098331 4 + 183740530 CT--CT | |
548 i rn5.chr3 C 0 C 0 | |
549 s hg19.chr9 13119009 4 - 141213431 CT--TT | |
550 i hg19.chr9 I 2 C 0 | |
551 | |
552 a score=10868.0 | |
553 s mm10.chr2 34706515 1 + 182113224 T | |
554 s rn5.chr3 19098335 1 + 183740530 T | |
555 i rn5.chr3 C 0 C 0 | |
556 s hg19.chr9 13119013 1 - 141213431 T | |
557 i hg19.chr9 C 0 C 0 | |
558 | |
559 a score=-67977.0 | |
560 s mm10.chr2 34706516 23 + 182113224 gggggtggagatacagctcag----------------tg | |
561 s rn5.chr3 19098336 23 + 183740530 ggggacaaagctacagctcag----------------tg | |
562 i rn5.chr3 C 0 C 0 | |
563 | |
564 a score=-16667.0 | |
565 s mm10.chr2 34706539 4 + 182113224 at---ga | |
566 s rn5.chr3 19098359 5 + 183740530 ac--aga | |
567 i rn5.chr3 C 0 C 0 | |
568 | |
569 a score=-47800.0 | |
570 s mm10.chr2 34706543 9 + 182113224 acacatgac | |
571 s rn5.chr3 19098364 9 + 183740530 gcacatgac | |
572 i rn5.chr3 C 0 C 0 | |
573 s sorAra1.scaffold_258498 5868 9 + 196505 GCTGGTAAT | |
574 i sorAra1.scaffold_258498 C 0 C 0 | |
575 | |
576 a score=-120172.0 | |
577 s mm10.chr2 34706552 20 + 182113224 taacatgtcccaagtt--------------------ctgg | |
578 s rn5.chr3 19098373 20 + 183740530 taacatgtcccgagtt--------------------ctga | |
579 i rn5.chr3 C 0 C 0 | |
580 | |
581 a score=-60366.0 | |
582 s mm10.chr2 34706572 21 + 182113224 gttcaacagatagtacca-------------------------------------------------------tac | |
583 s rn5.chr3 19098393 18 + 183740530 gttcaacagccagcacca---------------------------------------------------------- | |
584 i rn5.chr3 C 0 C 0 | |
585 s sorAra1.scaffold_258498 5877 5 + 196505 -------------TATCA---------------------------------------------------------- | |
586 i sorAra1.scaffold_258498 C 0 C 0 | |
587 | |
588 a score=-3306.0 | |
589 s mm10.chr2 34706593 3 + 182113224 cat-- | |
590 | |
591 a score=-199980.0 | |
592 s mm10.chr2 34706596 23 + 182113224 aa------aacAGCCAACAAAACCC-AGTT-------------- | |
593 s rn5.chr3 19098411 18 + 183740530 ----------gcagcaacaaaaCCC-AGT--------------- | |
594 i rn5.chr3 C 0 C 0 | |
595 s hg19.chr9 13119014 7 - 141213431 ------------------TGTATCA------------------- | |
596 i hg19.chr9 C 0 C 0 | |
597 | |
598 a score=21021.0 | |
599 s mm10.chr2 34706619 1 + 182113224 A | |
600 s rn5.chr3 19098429 1 + 183740530 A | |
601 i rn5.chr3 C 0 C 0 | |
602 | |
603 a score=28151.0 | |
604 s mm10.chr2 34706620 3 + 182113224 TCT | |
605 s rn5.chr3 19098430 3 + 183740530 TCT | |
606 i rn5.chr3 C 0 C 0 | |
607 | |
608 a score=21179.0 | |
609 s mm10.chr2 34706623 3 + 182113224 CTT- | |
610 s rn5.chr3 19098433 3 + 183740530 CTT- | |
611 i rn5.chr3 C 0 C 0 | |
612 | |
613 a score=-542671.0 | |
614 s mm10.chr2 34706626 14 + 182113224 TGG-TAAC-----AC------------T--------TTAT-------- | |
615 s rn5.chr3 19098436 14 + 183740530 TGG-TAAC-----AC------------T--------TTAT-------- | |
616 i rn5.chr3 C 0 C 0 | |
617 s hg19.chr9 13119021 7 - 141213431 -------------AC------------T--------TTAT-------- | |
618 i hg19.chr9 C 0 C 0 | |
619 s sorAra1.scaffold_258498 5882 7 + 196505 -------------AC------------A--------TTAT-------- | |
620 i sorAra1.scaffold_258498 C 0 C 0 | |
621 | |
622 a score=-12000.0 | |
623 s mm10.chr2 34706640 5 + 182113224 AAAC-A | |
624 s rn5.chr3 19098450 5 + 183740530 AAAC-A | |
625 i rn5.chr3 C 0 C 0 | |
626 s hg19.chr9 13119028 5 - 141213431 AAAT-A | |
627 i hg19.chr9 C 0 C 0 | |
628 s sorAra1.scaffold_258498 5889 5 + 196505 ACAC-G | |
629 i sorAra1.scaffold_258498 C 0 C 0 | |
630 | |
631 a score=112347.0 | |
632 s mm10.chr2 34706645 2 + 182113224 GA | |
633 s rn5.chr3 19098455 2 + 183740530 GA | |
634 i rn5.chr3 C 0 C 0 | |
635 s hg19.chr9 13119033 2 - 141213431 GG | |
636 i hg19.chr9 C 0 I 7 | |
637 s sorAra1.scaffold_258498 5894 2 + 196505 GG | |
638 i sorAra1.scaffold_258498 C 0 C 0 | |
639 | |
640 a score=-75428.0 | |
641 s mm10.chr2 34706647 10 + 182113224 AAGA-AGGGGA | |
642 s rn5.chr3 19098457 10 + 183740530 AAGA-AGGGGA | |
643 i rn5.chr3 C 0 C 0 | |
644 s hg19.chr9 13119042 10 - 141213431 AGGG-GGTGAA | |
645 i hg19.chr9 I 7 C 0 | |
646 s sorAra1.scaffold_258498 5896 10 + 196505 GTGG-TAGGAA | |
647 i sorAra1.scaffold_258498 C 0 C 0 | |
648 | |
649 a score=26690.0 | |
650 s mm10.chr2 34706657 1 + 182113224 T | |
651 s rn5.chr3 19098467 1 + 183740530 T | |
652 i rn5.chr3 C 0 C 0 | |
653 s hg19.chr9 13119052 1 - 141213431 C | |
654 i hg19.chr9 C 0 C 0 | |
655 s sorAra1.scaffold_258498 5906 1 + 196505 C | |
656 i sorAra1.scaffold_258498 C 0 I 2 | |
657 | |
658 a score=582929.0 | |
659 s mm10.chr2 34706658 21 + 182113224 GCCTTCAAA--------------------TTCCTAGC----CCTT | |
660 s rn5.chr3 19098468 21 + 183740530 GCCTTCAAA--------------------TTCCTAGT----CCTT | |
661 i rn5.chr3 C 0 C 0 | |
662 s hg19.chr9 13119053 21 - 141213431 ACCTTCAAA--------------------TCCCTACT----CCTT | |
663 i hg19.chr9 C 0 C 0 | |
664 s sorAra1.scaffold_258498 5909 21 + 196505 ACCTTCCAA--------------------TCCTTATT----CCTT | |
665 i sorAra1.scaffold_258498 I 2 C 0 | |
666 | |
667 a score=357258.0 | |
668 s mm10.chr2 34706679 6 + 182113224 AAAAC---------------------------------A--- | |
669 s rn5.chr3 19098489 6 + 183740530 AAAAC---------------------------------A--- | |
670 i rn5.chr3 C 0 C 0 | |
671 s hg19.chr9 13119074 6 - 141213431 AAAAC---------------------------------A--- | |
672 i hg19.chr9 C 0 C 0 | |
673 s sorAra1.scaffold_258498 5930 6 + 196505 AAAAC---------------------------------A--- | |
674 i sorAra1.scaffold_258498 C 0 C 0 | |
675 | |
676 a score=522064.0 | |
677 s mm10.chr2 34706685 8 + 182113224 AGA-C-AGAC | |
678 s rn5.chr3 19098495 8 + 183740530 AGA-C-AGAC | |
679 i rn5.chr3 C 0 C 0 | |
680 s hg19.chr9 13119080 8 - 141213431 AGA-C-AGAC | |
681 i hg19.chr9 C 0 C 0 | |
682 s sorAra1.scaffold_258498 5936 8 + 196505 AGA-C-AGAC | |
683 i sorAra1.scaffold_258498 C 0 C 0 | |
684 | |
685 a score=75873.0 | |
686 s mm10.chr2 34706693 1 + 182113224 A | |
687 s rn5.chr3 19098503 1 + 183740530 A | |
688 i rn5.chr3 C 0 C 0 | |
689 s hg19.chr9 13119088 1 - 141213431 A | |
690 i hg19.chr9 C 0 C 0 | |
691 s sorAra1.scaffold_258498 5944 1 + 196505 A | |
692 i sorAra1.scaffold_258498 C 0 C 0 | |
693 | |
694 a score=117040.0 | |
695 s mm10.chr2 34706694 1 + 182113224 T | |
696 s rn5.chr3 19098504 1 + 183740530 T | |
697 i rn5.chr3 C 0 C 0 | |
698 s hg19.chr9 13119089 1 - 141213431 T | |
699 i hg19.chr9 C 0 C 0 | |
700 s sorAra1.scaffold_258498 5945 1 + 196505 T | |
701 i sorAra1.scaffold_258498 C 0 C 0 | |
702 | |
703 a score=18601995.0 | |
704 s mm10.chr2 34706695 141 + 182113224 A-CCGGACACAAC-ACTGAGG--CCTGGT-GTGC-TGGGGC-GGGAA--CTGACCTCCCTGAC-ATCCGTATCATCA-GATGTGCTG-CCCAGTCCAGAACAG---CTCT-CCAGCTCTTGGAGGCGCTCTTCCTGCTTTAAGTCTGGAGCCTCTGA | |
705 s rn5.chr3 19098505 141 + 183740530 A-CCGGACACAAC-ACTGAGG--CCTGGT-GTGC-TGGGGC-GGGAA--CTGACCTCCCTGAC-ATCCGTATCATCA-GATGTACTG-CCCAGTCCAGAACAG---CTCT-CCAGCTCTTGGAGGCGCTCTTCCTGCTTTAAGTCTGGAGCCTCTGC | |
706 i rn5.chr3 C 0 C 0 | |
707 s hg19.chr9 13119090 141 - 141213431 A-CCGGACACAAC-ACTGAGG--CCTGGT-GTGC-TGGGGC-GGGAA--CTGACCTCCCTGAC-ATCCGTATCATCA-GATGTGCTA-CCCAGTCCAGAACAG---CTCT-CCAGTTCTTGCAGACGCTCCTCCTGCTTTAGGTCTGGGGCCTCTAA | |
708 i hg19.chr9 C 0 C 0 | |
709 s sorAra1.scaffold_258498 5946 141 + 196505 A-CCCGACACAAC-ACTGAGG--CCTGGT-GTGC-TGGGGC-GGGAA--CTGACCTCCCTGAC-ATCCGTGTCGTCA-GAGGTGCTG-CCCAGGCCGGAACAG---CTCT-CCAGCTCCTGCAGACGCTCCTCCTGCTTCAGGTCTGGGGCTTCTAG | |
710 i sorAra1.scaffold_258498 C 0 C 0 | |
711 | |
712 a score=93544.0 | |
713 s mm10.chr2 34706836 1 + 182113224 A | |
714 s rn5.chr3 19098646 1 + 183740530 A | |
715 i rn5.chr3 C 0 C 0 | |
716 s hg19.chr9 13119231 1 - 141213431 A | |
717 i hg19.chr9 C 0 C 0 | |
718 s sorAra1.scaffold_258498 6087 1 + 196505 G | |
719 i sorAra1.scaffold_258498 C 0 C 0 | |
720 | |
721 a score=265691.0 | |
722 s mm10.chr2 34706837 6 + 182113224 CAGAAA- | |
723 s rn5.chr3 19098647 6 + 183740530 CAGAGA- | |
724 i rn5.chr3 C 0 C 0 | |
725 s hg19.chr9 13119232 6 - 141213431 TAGAAG- | |
726 i hg19.chr9 C 0 C 0 | |
727 s sorAra1.scaffold_258498 6088 6 + 196505 GAAAGA- | |
728 i sorAra1.scaffold_258498 C 0 C 0 | |
729 | |
730 a score=100475.0 | |
731 s mm10.chr2 34706843 1 + 182113224 A | |
732 s rn5.chr3 19098653 1 + 183740530 A | |
733 i rn5.chr3 C 0 I 41 | |
734 s hg19.chr9 13119238 1 - 141213431 A | |
735 i hg19.chr9 C 0 I 45 | |
736 s sorAra1.scaffold_258498 6094 1 + 196505 G | |
737 i sorAra1.scaffold_258498 C 0 I 41 | |
738 | |
739 a score=123198.0 | |
740 s mm10.chr2 34706844 2 + 182113224 CA | |
741 s rn5.chr3 19098695 2 + 183740530 CA | |
742 i rn5.chr3 I 41 C 0 | |
743 s hg19.chr9 13119284 2 - 141213431 CA | |
744 i hg19.chr9 I 45 C 0 | |
745 s sorAra1.scaffold_258498 6136 2 + 196505 CC | |
746 i sorAra1.scaffold_258498 I 41 C 0 | |
747 | |
748 a score=83667.0 | |
749 s mm10.chr2 34706846 1 + 182113224 G | |
750 s rn5.chr3 19098697 1 + 183740530 G | |
751 i rn5.chr3 C 0 C 0 | |
752 s hg19.chr9 13119286 1 - 141213431 G | |
753 i hg19.chr9 C 0 C 0 | |
754 s sorAra1.scaffold_258498 6138 1 + 196505 A | |
755 i sorAra1.scaffold_258498 C 0 C 0 | |
756 | |
757 a score=30972.0 | |
758 s mm10.chr2 34706847 1 + 182113224 C | |
759 s rn5.chr3 19098698 1 + 183740530 C | |
760 i rn5.chr3 C 0 C 0 | |
761 s hg19.chr9 13119287 1 - 141213431 C | |
762 i hg19.chr9 C 0 C 0 | |
763 s sorAra1.scaffold_258498 6139 1 + 196505 C | |
764 i sorAra1.scaffold_258498 C 0 C 0 | |
765 | |
766 a score=74745.0 | |
767 s mm10.chr2 34706848 1 + 182113224 T | |
768 s rn5.chr3 19098699 1 + 183740530 T | |
769 i rn5.chr3 C 0 C 0 | |
770 s hg19.chr9 13119288 1 - 141213431 T | |
771 i hg19.chr9 C 0 C 0 | |
772 s sorAra1.scaffold_258498 6140 1 + 196505 T | |
773 i sorAra1.scaffold_258498 C 0 C 0 | |
774 | |
775 a score=223036.0 | |
776 s mm10.chr2 34706849 11 + 182113224 TT------TG-TG--ACT-TA | |
777 s rn5.chr3 19098700 11 + 183740530 TT------TG-TG--ACT-TA | |
778 i rn5.chr3 C 0 C 0 | |
779 s hg19.chr9 13119289 11 - 141213431 TT------TG-TG--ACC-CA | |
780 i hg19.chr9 C 0 C 0 | |
781 s sorAra1.scaffold_258498 6141 11 + 196505 TC------CG-TG--ACC-CA | |
782 i sorAra1.scaffold_258498 C 0 C 0 | |
783 | |
784 a score=3047381.0 | |
785 s mm10.chr2 34706860 139 + 182113224 GACATACAAG---C-------G-ATT-GGGG----AATAAA-GAGAT---TT----------A-------TAAG------CCTAAGCTACTT-AGC-AAAG-CTAGTTAG---ATCA---TAGTTTAAAGAAGAT-A---AGGTTATGA--TTTC-CTCCTGATA-----TACACACT---AGTTTGT----------TATGTACAG-ATGTCAAC---T | |
786 s rn5.chr3 19098711 134 + 183740530 G----AGAAG---C-------C-ACT-GGGG----AATACC-TAGCT---TT----------A-------TAAG------TCTAAGTTACTC-ACC-AAAA-CTTGTTAG---ATCA---TAGATT-AAGAAGGC-A---AGGTTATAA--TTTC-CCCCTGATA-----TACACACT---AATTTGC----------TATGCACAG-ACGACAAC---T | |
787 i rn5.chr3 C 0 C 0 | |
788 s hg19.chr9 13119300 149 - 141213431 G----ATAAA---CAAAG--CT-ACC-AGGG----CATGAA-TAAAA---TCAGTG-CAAATACATGTG-TAAG------TCTGGACTAGTT-----AATG-CTAGTTAG---ATTA---AGTGTT----AAGTC-A---AAGTTGTGAT-TTTC-ATCCCAATA-----TAAGC--C---AGTTCAC----------TGTGCACAG-ATGAAAAC-GTG | |
789 i hg19.chr9 C 0 C 0 | |
790 s sorAra1.scaffold_258498 6152 151 + 196505 G----CTGAA---GAAAA--CTGAAC-AGGG----CTT--A-CGGAAGGGTCAGTG-TAAATAGATTTC-TAGG------TCTCGGCCAGTT-AGT-AAGG-CTGGTT-G---AAGA---AACGCCAAGGAAGTC-ATATCAACTCTGAT-TTTC--CCCCAGCA-----TAGGC--C---AGT----------------TGTACAG-ATAAAAAC-T-- | |
791 i sorAra1.scaffold_258498 C 0 I 2 | |
792 | |
793 a score=-43731.0 | |
794 s mm10.chr2 34706999 2 + 182113224 AT- | |
795 s rn5.chr3 19098845 2 + 183740530 GT- | |
796 i rn5.chr3 C 0 C 0 | |
797 s hg19.chr9 13119449 1 - 141213431 G-- | |
798 i hg19.chr9 C 0 C 0 | |
799 s sorAra1.scaffold_258498 6305 2 + 196505 GG- | |
800 i sorAra1.scaffold_258498 I 2 C 0 | |
801 | |
802 a score=126153.0 | |
803 s mm10.chr2 34707001 4 + 182113224 TTCT- | |
804 s rn5.chr3 19098847 4 + 183740530 TTCT- | |
805 i rn5.chr3 C 0 C 0 | |
806 s hg19.chr9 13119450 4 - 141213431 TTCT- | |
807 i hg19.chr9 C 0 C 0 | |
808 s sorAra1.scaffold_258498 6307 4 + 196505 TTTT- | |
809 i sorAra1.scaffold_258498 C 0 C 0 | |
810 | |
811 a score=311713.0 | |
812 s mm10.chr2 34707005 8 + 182113224 AGAATACT | |
813 s rn5.chr3 19098851 8 + 183740530 AGACTACT | |
814 i rn5.chr3 C 0 C 0 | |
815 s hg19.chr9 13119454 8 - 141213431 AGATCACT | |
816 i hg19.chr9 C 0 I 4 | |
817 s sorAra1.scaffold_258498 6311 8 + 196505 AGATCACT | |
818 i sorAra1.scaffold_258498 C 0 C 0 | |
819 | |
820 a score=-2161.0 | |
821 s mm10.chr2 34707013 2 + 182113224 TT | |
822 s rn5.chr3 19098859 2 + 183740530 CT | |
823 i rn5.chr3 C 0 I 199 | |
824 s hg19.chr9 13119466 1 - 141213431 -T | |
825 i hg19.chr9 I 4 I 1 | |
826 | |
827 a score=-432190.0 | |
828 s mm10.chr2 34707015 20 + 182113224 AAAGAAAAAAAAAAGCG------------AT----------T--------------- | |
829 s rn5.chr3 19099060 26 + 183740530 aaacaaaacaaaacaaa------------acTGTA----CAT--------------- | |
830 i rn5.chr3 I 199 C 0 | |
831 s hg19.chr9 13119468 11 - 141213431 ---------------------------ACAGAGTA----TGC--------------- | |
832 i hg19.chr9 I 1 C 0 | |
833 s sorAra1.scaffold_258498 6319 17 + 196505 -------------------ATT--CTCAATGAGTG----TGC--------------- | |
834 i sorAra1.scaffold_258498 C 0 C 0 | |
835 | |
836 a score=221858.0 | |
837 s mm10.chr2 34707035 6 + 182113224 TCTTGG | |
838 s rn5.chr3 19099086 6 + 183740530 TCTTGG | |
839 i rn5.chr3 C 0 C 0 | |
840 s hg19.chr9 13119479 6 - 141213431 TATTGA | |
841 i hg19.chr9 C 0 C 0 | |
842 s sorAra1.scaffold_258498 6336 5 + 196505 TAC-GG | |
843 i sorAra1.scaffold_258498 C 0 C 0 | |
844 | |
845 a score=458493.0 | |
846 s mm10.chr2 34707041 12 + 182113224 TTAACACGTAAA- | |
847 s rn5.chr3 19099092 12 + 183740530 TTAACACATAAA- | |
848 i rn5.chr3 C 0 C 0 | |
849 s hg19.chr9 13119485 12 - 141213431 TTAACATGTGAA- | |
850 i hg19.chr9 C 0 C 0 | |
851 s sorAra1.scaffold_258498 6341 12 + 196505 CTAACATGAAAA- | |
852 i sorAra1.scaffold_258498 C 0 C 0 | |
853 | |
854 a score=67988.0 | |
855 s mm10.chr2 34707053 8 + 182113224 CTA---ATCAA | |
856 s rn5.chr3 19099104 5 + 183740530 CTG------AA | |
857 i rn5.chr3 C 0 C 0 | |
858 s hg19.chr9 13119497 5 - 141213431 CTG------GA | |
859 i hg19.chr9 C 0 C 0 | |
860 s sorAra1.scaffold_258498 6353 5 + 196505 CTG------AA | |
861 i sorAra1.scaffold_258498 C 0 C 0 | |
862 | |
863 a score=123485.0 | |
864 s mm10.chr2 34707061 3 + 182113224 TAG | |
865 s rn5.chr3 19099109 3 + 183740530 CAG | |
866 i rn5.chr3 C 0 C 0 | |
867 s hg19.chr9 13119502 3 - 141213431 CAA | |
868 i hg19.chr9 C 0 C 0 | |
869 s sorAra1.scaffold_258498 6358 3 + 196505 CAA | |
870 i sorAra1.scaffold_258498 C 0 C 0 | |
871 | |
872 a score=33526.0 | |
873 s mm10.chr2 34707064 4 + 182113224 GA--GC-- | |
874 s rn5.chr3 19099112 4 + 183740530 GA--GC-- | |
875 i rn5.chr3 C 0 C 0 | |
876 s hg19.chr9 13119505 6 - 141213431 GAGAGT-- | |
877 i hg19.chr9 C 0 C 0 | |
878 s sorAra1.scaffold_258498 6361 6 + 196505 GAACGC-- | |
879 i sorAra1.scaffold_258498 C 0 C 0 | |
880 | |
881 a score=167903.0 | |
882 s mm10.chr2 34707068 8 + 182113224 A-CAGAAT--A | |
883 s rn5.chr3 19099116 8 + 183740530 A-CAGAAT--A | |
884 i rn5.chr3 C 0 C 0 | |
885 s hg19.chr9 13119511 8 - 141213431 A-TGGAAT--A | |
886 i hg19.chr9 C 0 C 0 | |
887 s sorAra1.scaffold_258498 6367 7 + 196505 A-GAGAAG--- | |
888 i sorAra1.scaffold_258498 C 0 C 0 | |
889 | |
890 a score=2760.0 | |
891 s mm10.chr2 34707076 1 + 182113224 A | |
892 s rn5.chr3 19099124 1 + 183740530 G | |
893 i rn5.chr3 C 0 C 0 | |
894 s hg19.chr9 13119519 1 - 141213431 G | |
895 i hg19.chr9 C 0 C 0 | |
896 | |
897 a score=-203.0 | |
898 s mm10.chr2 34707077 4 + 182113224 TATA--- | |
899 s rn5.chr3 19099125 3 + 183740530 TGT---- | |
900 i rn5.chr3 C 0 C 0 | |
901 s hg19.chr9 13119520 3 - 141213431 CCT---- | |
902 i hg19.chr9 C 0 C 0 | |
903 | |
904 a score=73448.0 | |
905 s mm10.chr2 34707081 10 + 182113224 CAACACTGTA--- | |
906 s rn5.chr3 19099128 9 + 183740530 -AACACTGTA--- | |
907 i rn5.chr3 C 0 C 0 | |
908 s hg19.chr9 13119523 9 - 141213431 -GGTATTAAA--- | |
909 i hg19.chr9 C 0 C 0 | |
910 s sorAra1.scaffold_258498 6374 1 + 196505 ---------A--- | |
911 i sorAra1.scaffold_258498 C 0 C 0 | |
912 | |
913 a score=-28287.0 | |
914 s mm10.chr2 34707091 5 + 182113224 TCAA---C | |
915 s rn5.chr3 19099137 7 + 183740530 TCCACT-C | |
916 i rn5.chr3 C 0 C 0 | |
917 s sorAra1.scaffold_258498 6375 5 + 196505 TCAAC--- | |
918 i sorAra1.scaffold_258498 C 0 C 0 | |
919 | |
920 a score=4831.0 | |
921 s mm10.chr2 34707096 1 + 182113224 T | |
922 s rn5.chr3 19099144 1 + 183740530 T | |
923 i rn5.chr3 C 0 C 0 | |
924 s hg19.chr9 13119532 1 - 141213431 T | |
925 i hg19.chr9 C 0 I 709 | |
926 s sorAra1.scaffold_258498 6380 1 + 196505 T | |
927 i sorAra1.scaffold_258498 C 0 I 1 | |
928 | |
929 a score=555.0 | |
930 s mm10.chr2 34707097 1 + 182113224 C | |
931 s rn5.chr3 19099145 1 + 183740530 C | |
932 i rn5.chr3 C 0 C 0 | |
933 | |
934 a score=18165.0 | |
935 s mm10.chr2 34707098 3 + 182113224 TCT | |
936 s rn5.chr3 19099146 3 + 183740530 TCT | |
937 i rn5.chr3 C 0 C 0 | |
938 s sorAra1.scaffold_258498 6382 2 + 196505 -TT | |
939 i sorAra1.scaffold_258498 I 1 C 0 | |
940 | |
941 a score=32760.0 | |
942 s mm10.chr2 34707101 3 + 182113224 AAA | |
943 s rn5.chr3 19099149 3 + 183740530 AAA | |
944 i rn5.chr3 C 0 C 0 | |
945 s sorAra1.scaffold_258498 6384 3 + 196505 AAA | |
946 i sorAra1.scaffold_258498 C 0 C 0 | |
947 | |
948 a score=-12377.0 | |
949 s mm10.chr2 34707104 8 + 182113224 TCTCAATG | |
950 s rn5.chr3 19099152 8 + 183740530 GTTCAATG | |
951 i rn5.chr3 C 0 C 0 | |
952 s sorAra1.scaffold_258498 6387 6 + 196505 --TTTAAA | |
953 i sorAra1.scaffold_258498 C 0 I 672 | |
954 | |
955 a score=13142.0 | |
956 s mm10.chr2 34707112 17 + 182113224 ttctcaaaagcacttaa--- | |
957 s rn5.chr3 19099160 17 + 183740530 TTTTCAAAAGCACTTAC--- | |
958 i rn5.chr3 C 0 C 0 | |
959 | |
960 a score=2730.0 | |
961 s mm10.chr2 34707129 2 + 182113224 aa | |
962 s rn5.chr3 19099177 2 + 183740530 AA | |
963 i rn5.chr3 C 0 C 0 | |
964 | |
965 a score=1746.0 | |
966 s mm10.chr2 34707131 3 + 182113224 tgg | |
967 s rn5.chr3 19099179 3 + 183740530 Tgg | |
968 i rn5.chr3 C 0 C 0 | |
969 | |
970 a score=1998.0 | |
971 s mm10.chr2 34707134 22 + 182113224 gcat------gaca--gcagggcaatctca | |
972 s rn5.chr3 19099182 24 + 183740530 gcat------gatattgcagggcactctca | |
973 i rn5.chr3 C 0 C 0 | |
974 | |
975 a score=452.0 | |
976 s mm10.chr2 34707156 4 + 182113224 acac | |
977 s rn5.chr3 19099206 4 + 183740530 gcac | |
978 i rn5.chr3 C 0 C 0 | |
979 | |
980 a score=8445.0 | |
981 s mm10.chr2 34707160 152 + 182113224 tcaataagcagaggcaggtggatctctgtgagtttgagtccagcctaaaatacactggcagttccatgaatagcctgagctacatgacgagatcctgtctcaaaCTAGCTCCAAAAAGGAAGACAGG-AAAATCATTTCTTTACTTAATACTT | |
982 s rn5.chr3 19099210 147 + 183740530 tcaagaggcagaggcaggtgga--tctgtaagtctgaggccagcctgaggttcactggcagttcca-gcatagcctgagctacatgatgagaccctggctcaaaccaa---aagaaaGAAAGAAAGGAAAAATGATTTCTTTATCTAATATTT | |
983 i rn5.chr3 C 0 I 1 | |
984 | |
985 a score=0.0 | |
986 s mm10.chr2 34707312 6 + 182113224 TACCTA | |
987 |