Mercurial > repos > iuc > pygenometracks

comparison test-data/test23.ini @ 11:7dd841a32245 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit df07890f27c5d18e423ec889eadca82bd7958def
author iuc
date Sat, 01 Oct 2022 08:43:22 +0000
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10:a1abfa420d9d 11:7dd841a32245
1 [x-axis]
2 where = top
3
4 [spacer]
5 height = 0.05
6
7 [hic matrix]
8 file = Li_et_al_2015.h5
9 title = classical depth=300000 with arcs
10 depth = 300000
11 transform = log1p
12 file_type = hic_matrix
13
14 [test arcs overlay]
15 file = test_wide.arcs
16 color = red
17 line_width = 5
18 links_type = loops
19 overlay_previous = share-y
20
21 [hic matrix square]
22 file = Li_et_al_2015.h5
23 title = square with arcs
24 transform = log1p
25 file_type = hic_matrix_square
26
27 [test arcs overlay]
28 file = test_wide.arcs
29 color = red
30 line_width = 5
31 links_type = squares
32 overlay_previous = share-y
33
34 [hic matrix square]
35 file = Li_et_al_2015.h5
36 title = square with arcs region2=chrX:3000000-3100000
37 transform = log1p
38 file_type = hic_matrix_square
39 region2 = chrX:3000000-3100000
40
41 [test arcs overlay]
42 file = test_wide.arcs
43 color = red
44 line_width = 5
45 links_type = squares
46 overlay_previous = share-y
47
48 [hic matrix square]
49 file = Li_et_al_2015.h5
50 title = square with domains, colormap = Blues, tranform = no, region2=chrX:3000000-3100000
51 file_type = hic_matrix_square
52 region2 = chrX:3000000-3100000
53 colormap = Blues
54 transform = no
55
56 [test domains]
57 file = tad_classification.bed
58 color = none
59 border_color = black
60 display = squares
61 overlay_previous = share-y