Mercurial > repos > iuc > pygenometracks

diff test-data/test20.ini @ 8:4ac4e7083b7e draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pygenometracks commit 3bfe22506f7d9922ac885ef6a6fbe8f96c83ed14"
author: iuc
date: Tue, 21 Jul 2020 03:32:48 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test20.ini	Tue Jul 21 03:32:48 2020 -0400
@@ -0,0 +1,61 @@
+[x-axis]
+where = top
+
+[spacer]
+height = 0.05
+[hic matrix]
+file = Li_et_al_2015.h5
+title = depth = 300000; transform = log1p; min_value = 5 (next track: overlay_previous = share-y links_type = loops)
+depth = 300000
+min_value = 5
+transform = log1p
+file_type = hic_matrix
+show_masked_bins = false
+
+[test arcs overlay]
+file = test_wide.arcs
+color = red
+line_width = 5
+links_type = loops
+overlay_previous = share-y
+
+[test arcs]
+file = test_wide.arcs
+line_width = 3
+color = RdYlGn
+title = links line_width = 3 color RdYlGn
+height = 3
+orientation = inverted
+
+[spacer]
+height = 1
+
+[hic matrix]
+file = Li_et_al_2015.h5
+title = depth = 300000; transform = log1p; min_value = 5 (next track: overlay_previous = share-y links_type = loops)
+depth = 300000
+min_value = 5
+transform = log1p
+file_type = hic_matrix
+show_masked_bins = false
+
+[test arcs overlay]
+file = test_wide.arcs
+color = red
+line_width = 5
+links_type = loops
+overlay_previous = share-y
+
+[test arcs]
+file = test_wide.arcs
+line_width = 3
+color = RdYlGn
+title = links line_width = 3 color RdYlGn use_middle = true
+use_middle = true
+height = 3
+orientation = inverted
+
+[vlines]
+file = tad_classification.bed
+type = vlines
+line_width = 3