Mercurial > repos > iuc > qiime_beta_diversity_through_plots

comparison beta_diversity_through_plots.xml @ 7:70c4237c3a00 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 07:52:18 -0500
parents 2140c12755d0
children
comparison
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6:a1a80bdf10b5 7:70c4237c3a00
1 <tool id="qiime_beta_diversity_through_plots" name="Compute beta diversity distance matrices and generate PCoA plots" version="@WRAPPER_VERSION@.0"> 1 <tool id="qiime_beta_diversity_through_plots" name="Compute beta diversity distance matrices and generate PCoA plots" version="@WRAPPER_VERSION@.0" profile="@PROFILE@">
2 <description>(beta_diversity_through_plots)</description> 2 <description>(beta_diversity_through_plots)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <stdio> 7 <stdio>
8 <regex match="VisibleDeprecationWarning" source="both" level="warning" description="VisibleDeprecationWarning on numpy for `rank`"/> 8 <regex match="VisibleDeprecationWarning" source="both" level="warning" description="VisibleDeprecationWarning on numpy for `rank`"/>
9 </stdio> 9 </stdio>
10 <version_command>beta_diversity_through_plots.py --version</version_command> 10 <version_command>beta_diversity_through_plots.py --version</version_command>
11 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
12 @MPLBACKEND@
12 beta_diversity_through_plots.py 13 beta_diversity_through_plots.py
13 --otu_table_fp '$otu_table_fp' 14 --otu_table_fp '$otu_table_fp'
14 --mapping_fp '$mapping_fp' 15 --mapping_fp '$mapping_fp'
15 --output_dir beta_diversity_through_plots 16 --output_dir beta_diversity_through_plots
16 #if $tree_fp 17 #if $tree_fp