Mercurial > repos > iuc > qiime_collapse_samples

annotate test-data/collapse_samples/map.txt @ 0:242462fc608b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
author iuc
date Mon, 10 Jul 2017 16:38:55 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
1 #SampleID BarcodeSequence LinkerPrimerSequence SampleType year month day subject replicate-group days_since_epoch Description
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
2 f1 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA feces 2008 10 22 1 1 14174 fecal1
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
3 f2 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 1 14175 fecal2
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
4 f3 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 2 1 14175 identical sequences to fecal2
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
5 f4 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 2 1 14175 all sequences identical, map to GG 295053 at 97 percent id
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
6 f5 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 2 14175 derived from f3 with some changes to sequences to add one new otu
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
7 f6 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 2 14175 derived from f4 with some changes to sequences to add one new otu
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
8 p1 AACGCACGCTAG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 21 1 2 14173 palm1, contains one randomly generated sequence
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
9 p2 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 22 2 2 14174 palm2
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
10 t1 AGTGAGAGAAGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 21 2 2 14173 tongue1, contains one randomly generated sequence
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
11 t2 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 22 2 2 14174 tongue2
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
12 not16S.1 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Other 2008 10 22 1 3 14174 randomly generated sequence plus some variants, these should not map to 16S