Mercurial > repos > iuc > qiime_collapse_samples

diff test-data/collapse_samples/collapsed_first_2fields_map.txt @ 0:242462fc608b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
author iuc
date Mon, 10 Jul 2017 16:38:55 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/collapse_samples/collapsed_first_2fields_map.txt	Mon Jul 10 16:38:55 2017 -0400
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+#SampleID	original-sample-ids	BarcodeSequence	LinkerPrimerSequence	SampleType	month	day	replicate-group	days_since_epoch	Description
+1.2008	(f1, f2, f5, f6, p1, not16S.1)	(ACACTGTTCATG, ACCAGACGATGC, ACCAGACGATGC, ACCAGACGATGC, AACGCACGCTAG, ATACTATTGCGC)	GTGCCAGCMGCCGCGGTAA	(feces, feces, feces, feces, L_palm, Other)	10	(22, 23, 23, 23, 21, 22)	(1, 1, 2, 2, 2, 3)	(14174, 14175, 14175, 14175, 14173, 14174)	(fecal1, fecal2, derived from f3 with some changes to sequences to add one new otu, derived from f4 with some changes to sequences to add one new otu, palm1, contains one randomly generated sequence, randomly generated sequence plus some variants, these should not map to 16S)
+2.2008	(f3, f4, p2, t1, t2)	(ACCAGACGATGC, ACCAGACGATGC, ACACTGTTCATG, AGTGAGAGAAGC, ATACTATTGCGC)	GTGCCAGCMGCCGCGGTAA	(feces, feces, L_palm, Tongue, Tongue)	10	(23, 23, 22, 21, 22)	(1, 1, 2, 2, 2)	(14175, 14175, 14174, 14173, 14174)	(identical sequences to fecal2, all sequences identical, map to GG 295053 at 97 percent id, palm2, tongue1, contains one randomly generated sequence, tongue2)
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