Mercurial > repos > iuc > qiime_collapse_samples
diff test-data/collapse_samples/map.txt @ 0:242462fc608b draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
| author | iuc |
|---|---|
| date | Mon, 10 Jul 2017 16:38:55 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/collapse_samples/map.txt Mon Jul 10 16:38:55 2017 -0400 @@ -0,0 +1,12 @@ +#SampleID BarcodeSequence LinkerPrimerSequence SampleType year month day subject replicate-group days_since_epoch Description +f1 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA feces 2008 10 22 1 1 14174 fecal1 +f2 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 1 14175 fecal2 +f3 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 2 1 14175 identical sequences to fecal2 +f4 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 2 1 14175 all sequences identical, map to GG 295053 at 97 percent id +f5 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 2 14175 derived from f3 with some changes to sequences to add one new otu +f6 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 2 14175 derived from f4 with some changes to sequences to add one new otu +p1 AACGCACGCTAG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 21 1 2 14173 palm1, contains one randomly generated sequence +p2 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 22 2 2 14174 palm2 +t1 AGTGAGAGAAGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 21 2 2 14173 tongue1, contains one randomly generated sequence +t2 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 22 2 2 14174 tongue2 +not16S.1 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Other 2008 10 22 1 3 14174 randomly generated sequence plus some variants, these should not map to 16S \ No newline at end of file