Mercurial > repos > iuc > qiime_filter_fasta

comparison filter_fasta.xml @ 7:03469c9daff1 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 07:40:53 -0500
parents 82ab467a74fc
children
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6:11b19edeb3af 7:03469c9daff1
1 <tool id="qiime_filter_fasta" name="Filter fasta" version="@WRAPPER_VERSION@.0"> 1 <tool id="qiime_filter_fasta" name="Filter fasta" version="@WRAPPER_VERSION@.0" profile="@PROFILE@">
2 <description>to remove sequences based on input criteria (filter_fasta)</description> 2 <description>to remove sequences based on input criteria (filter_fasta)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 @MPLBACKEND@
8 filter_fasta.py 9 filter_fasta.py
9 --input_fasta_fp '$input_fasta_fp' 10 --input_fasta_fp '$input_fasta_fp'
10 --output_fasta_fp '$fitered_fasta' 11 --output_fasta_fp '$fitered_fasta'
11 #if $selection.type == "otu_map" 12 #if $selection.type == "otu_map"
12 --otu_map '$selection.otu_map' 13 --otu_map '$selection.otu_map'