Mercurial > repos > iuc > qiime_filter_fasta
comparison filter_fasta.xml @ 7:03469c9daff1 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author | iuc |
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date | Thu, 05 Dec 2019 07:40:53 -0500 |
parents | 82ab467a74fc |
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6:11b19edeb3af | 7:03469c9daff1 |
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1 <tool id="qiime_filter_fasta" name="Filter fasta" version="@WRAPPER_VERSION@.0"> | 1 <tool id="qiime_filter_fasta" name="Filter fasta" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> |
2 <description>to remove sequences based on input criteria (filter_fasta)</description> | 2 <description>to remove sequences based on input criteria (filter_fasta)</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="requirements"/> | 6 <expand macro="requirements"/> |
7 <command detect_errors="aggressive"><![CDATA[ | 7 <command detect_errors="aggressive"><![CDATA[ |
8 @MPLBACKEND@ | |
8 filter_fasta.py | 9 filter_fasta.py |
9 --input_fasta_fp '$input_fasta_fp' | 10 --input_fasta_fp '$input_fasta_fp' |
10 --output_fasta_fp '$fitered_fasta' | 11 --output_fasta_fp '$fitered_fasta' |
11 #if $selection.type == "otu_map" | 12 #if $selection.type == "otu_map" |
12 --otu_map '$selection.otu_map' | 13 --otu_map '$selection.otu_map' |