Mercurial > repos > iuc > qiime_pick_closed_reference_otus
comparison pick_closed_reference_otus.xml @ 5:5307c6be95df draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author | iuc |
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date | Thu, 05 Dec 2019 07:41:48 -0500 |
parents | 935abbf93f99 |
children |
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4:cad5d510e98e | 5:5307c6be95df |
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1 <tool id="qiime_pick_closed_reference_otus" name="Closed-reference OTU picking" version="@WRAPPER_VERSION@.0"> | 1 <tool id="qiime_pick_closed_reference_otus" name="Closed-reference OTU picking" version="@WRAPPER_VERSION@.0" profile="@PROFILE@"> |
2 <description> Shotgun UniFrac workflow (pick_closed_reference_otus)</description> | 2 <description> Shotgun UniFrac workflow (pick_closed_reference_otus)</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="requirements"/> | 6 <expand macro="requirements"/> |
7 <version_command>pick_closed_reference_otus.py --version</version_command> | 7 <version_command>pick_closed_reference_otus.py --version</version_command> |
8 <command detect_errors="aggressive"><![CDATA[ | 8 <command detect_errors="aggressive"><![CDATA[ |
9 @MPLBACKEND@ | |
9 pick_closed_reference_otus.py | 10 pick_closed_reference_otus.py |
10 --input_fp '$input_fp' | 11 --input_fp '$input_fp' |
11 --output_dir otus | 12 --output_dir otus |
12 #if str( $ref_seq.selector ) == 'history' | 13 #if str( $ref_seq.selector ) == 'history' |
13 #set $ref = $ref_seq.reference_fp | 14 #set $ref = $ref_seq.reference_fp |