Mercurial > repos > iuc > qiime_pick_open_reference_otus

annotate test-data/summarize_taxa/1_L5.txt @ 4:bf3348cc35d5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 528ca3b14c2ca9b7ac18a0f9d80a5f4a235707bf
author iuc
date Mon, 16 Oct 2017 04:57:59 -0400
parents f668a753bcfc
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
1 #SampleID BarcodeSequence LinkerPrimerSequence SampleType year month day subject days_since_epoch Description Unclassified;Other k__Bacteria;Other k__Bacteria;p__Proteobacteria Unclassified;Other;Other k__Bacteria;Other;Other k__Bacteria;p__Proteobacteria;Other Unclassified;Other;Other;Other k__Bacteria;Other;Other;Other k__Bacteria;p__Proteobacteria;Other;Other Unclassified;Other;Other;Other;Other k__Bacteria;Other;Other;Other;Other k__Bacteria;p__Proteobacteria;Other;Other;Other
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
2 f1 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA feces 2008 10 22 1 14174 fecal1 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
3 f2 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 14175 fecal2 0.0454545454545 0.954545454545 0.0 0.0454545454545 0.954545454545 0.0 0.0454545454545 0.954545454545 0.0 0.0454545454545 0.954545454545 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
4 f3 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 14175 identical sequences to fecal2 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
5 f4 ACCAGACGATGC GTGCCAGCMGCCGCGGTAA feces 2008 10 23 1 14175 all sequences identical, map to GG 295053 at 97 percent id 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
6 p1 AACGCACGCTAG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 21 1 14173 palm1, contains one randomly generated sequence 0.130434782609 0.869565217391 0.0 0.130434782609 0.869565217391 0.0 0.130434782609 0.869565217391 0.0 0.130434782609 0.869565217391 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
7 p2 ACACTGTTCATG GTGCCAGCMGCCGCGGTAA L_palm 2008 10 22 1 14174 palm2 0.272727272727 0.681818181818 0.0454545454545 0.272727272727 0.681818181818 0.0454545454545 0.272727272727 0.681818181818 0.0454545454545 0.272727272727 0.681818181818 0.0454545454545
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
8 t1 AGTGAGAGAAGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 21 1 14173 tongue1, contains one randomly generated sequence 0.869565217391 0.130434782609 0.0 0.869565217391 0.130434782609 0.0 0.869565217391 0.130434782609 0.0 0.869565217391 0.130434782609 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
9 t2 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Tongue 2008 10 22 1 14174 tongue2 0.681818181818 0.318181818182 0.0 0.681818181818 0.318181818182 0.0 0.681818181818 0.318181818182 0.0 0.681818181818 0.318181818182 0.0
f668a753bcfc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
iuc
parents:
diff changeset
10 not16S.1 ATACTATTGCGC GTGCCAGCMGCCGCGGTAA Other 2008 10 22 1 14174 randomly generated sequence plus some variants, these should not map to 16S 0.909090909091 0.0909090909091 0.0 0.909090909091 0.0909090909091 0.0 0.909090909091 0.0909090909091 0.0 0.909090909091 0.0909090909091 0.0