Mercurial > repos > iuc > qiime_pick_otus
comparison beta_diversity_through_plots_html_generation.py @ 6:ed6dbf8c8a17 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
| author | iuc |
|---|---|
| date | Tue, 30 Oct 2018 19:27:07 -0400 |
| parents | f77fff416ea7 |
| children |
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| 5:127947ced93f | 6:ed6dbf8c8a17 |
|---|---|
| 19 s += '\t\t\tBeta diversity metrics\n' | 19 s += '\t\t\tBeta diversity metrics\n' |
| 20 s += '\t\t\t<ul>\n' | 20 s += '\t\t\t<ul>\n' |
| 21 | 21 |
| 22 for directory in dir_list: | 22 for directory in dir_list: |
| 23 regexp_result = re.search( | 23 regexp_result = re.search( |
| 24 '([a-zA-Z\_]*)_emperor_pcoa_plot', | 24 r'([a-zA-Z\_]*)_emperor_pcoa_plot', |
| 25 directory) | 25 directory) |
| 26 metric = regexp_result.group(1) | 26 metric = regexp_result.group(1) |
| 27 s += '\t\t\t\t<li>' + metric + ': ' | 27 s += '\t\t\t\t<li>' + metric + ': ' |
| 28 s += '<a href="' + directory | 28 s += '<a href="' + directory |
| 29 s += '/index.html">PCoA results</a></td>\n' | 29 s += '/index.html">PCoA results</a></td>\n' |