Mercurial > repos > iuc > qiime_pick_rep_set
diff pick_rep_set.xml @ 5:8218f848c2b9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 3b54163c4f7daff76fcc589c4a9057bb03904380
| author | iuc |
|---|---|
| date | Sat, 05 Aug 2017 07:27:17 -0400 |
| parents | 6ebade612aa0 |
| children | 7cba5f38ec6e |
line wrap: on
line diff
--- a/pick_rep_set.xml Mon Jul 10 16:42:21 2017 -0400 +++ b/pick_rep_set.xml Sat Aug 05 07:27:17 2017 -0400 @@ -1,25 +1,25 @@ <tool id="qiime_pick_rep_set" name="Pick representative set of sequences" version="@WRAPPER_VERSION@.0"> - <description></description> + <description> (pick_rep_set)</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <version_command>pick_rep_set.py --version</version_command> <command detect_errors="aggressive"><![CDATA[ - pick_rep_set.py - --input_file '$input_file' - #if $picking.type == "de_novo" - --fasta_file '$picking.fasta_file' - #else if $picking.type == "preferred" - --reference_seqs_fp '$picking.reference_seqs_fp' - #if $picking.fasta_file - --fasta_file '$picking.fasta_file' - #end if - #end if - --rep_set_picking_method '$rep_set_picking_method' - --sort_by '$sort_by' - --result_fp '$result_fp' - --log_fp '$log_fp' +pick_rep_set.py + --input_file '$input_file' + #if $picking.type == "de_novo" + --fasta_file '$picking.fasta_file' + #else if $picking.type == "preferred" + --reference_seqs_fp '$picking.reference_seqs_fp' + #if $picking.fasta_file + --fasta_file '$picking.fasta_file' + #end if + #end if + --rep_set_picking_method '$rep_set_picking_method' + --sort_by '$sort_by' + --result_fp '$result_fp' + --log_fp '$log_fp' ]]></command> <inputs> <param argument="--input_file" type="data" format="txt" label="Input OTU mapping file"/>