Mercurial > repos > iuc > qiime_upgma_cluster

diff upgma_cluster.xml @ 5:4e9b6a0fcb78 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit 3b54163c4f7daff76fcc589c4a9057bb03904380
author iuc
date Sat, 05 Aug 2017 07:33:48 -0400
parents e7324235f49e
children aae131716d22
line wrap: on
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--- a/upgma_cluster.xml	Mon Jul 10 16:44:06 2017 -0400
+++ b/upgma_cluster.xml	Sat Aug 05 07:33:48 2017 -0400
@@ -1,22 +1,22 @@
-<tool id="qiime_upgma_cluster" name="Build UPGMA tree" version="@WRAPPER_VERSION@.0">
-    <description>comparing samples</description>
+<tool id="qiime_upgma_cluster" name="Build a UPGMA tree" version="@WRAPPER_VERSION@.0">
+    <description> comparing samples (upgma_cluster)</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements"/>
     <version_command>upgma_cluster.py -v</version_command>
     <command detect_errors="aggressive"><![CDATA[
-        mkdir input
-        &&
-        #for $i, $matrix in enumerate($input_path)
-            cp '$matrix' 'input/dataset_$i' &&
-        #end for
-        upgma_cluster.py
-            --input_path input
-            --output_path output
+mkdir input
+&&
+#for $i, $matrix in enumerate($input_path)
+    cp '$matrix' 'input/dataset_$i' &&
+#end for
+upgma_cluster.py
+    --input_path input
+    --output_path output
     ]]></command>
     <inputs>
-        <param argument="--input_path" type="data" format="txt" label="Distance matrix" multiple="true"/>
+        <param argument="--input_path" type="data" format="txt" multiple="true" label="Distance matrix"/>
     </inputs>
     <outputs>
         <collection type="list" name="output_trees" label="${tool.name} on ${on_string}: UPGMA trees">