Mercurial > repos > iuc > qiime_validate_mapping_file

diff test-data/summarize_taxa/map.txt @ 0:51ce498c97f4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
author iuc
date Thu, 18 May 2017 09:29:50 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summarize_taxa/map.txt	Thu May 18 09:29:50 2017 -0400
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+#SampleID	BarcodeSequence	LinkerPrimerSequence	SampleType	year	month	day	subject	days_since_epoch	Description
+f1	ACACTGTTCATG	GTGCCAGCMGCCGCGGTAA	feces	2008	10	22	1	14174	fecal1
+f2	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	fecal2
+f3	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	identical sequences to fecal2
+f4	ACCAGACGATGC	GTGCCAGCMGCCGCGGTAA	feces	2008	10	23	1	14175	all sequences identical, map to GG 295053 at 97 percent id
+p1	AACGCACGCTAG	GTGCCAGCMGCCGCGGTAA	L_palm	2008	10	21	1	14173	palm1, contains one randomly generated sequence
+p2	ACACTGTTCATG	GTGCCAGCMGCCGCGGTAA	L_palm	2008	10	22	1	14174	palm2
+t1	AGTGAGAGAAGC	GTGCCAGCMGCCGCGGTAA	Tongue	2008	10	21	1	14173	tongue1, contains one randomly generated sequence
+t2	ATACTATTGCGC	GTGCCAGCMGCCGCGGTAA	Tongue	2008	10	22	1	14174	tongue2
+not16S.1	ATACTATTGCGC	GTGCCAGCMGCCGCGGTAA	Other	2008	10	22	1	14174	randomly generated sequence plus some variants, these should not map to 16S
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