Mercurial > repos > iuc > qualimap_bamqc

comparison test-data/rnaseq_qc_results_default.txt @ 2:e7fd6754d093 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qualimap commit 3c0443b29b1fac5ec193912b0c03a79d75ba731a"
author iuc
date Mon, 13 Jan 2020 13:04:33 -0500
parents ac607906f10a
children
comparison
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1:4a89c6f84425 2:e7fd6754d093
1 RNA-Seq QC report 1 RNA-Seq QC report
2 ----------------------------------- 2 -----------------------------------
3 3
4 >>>>>>> Input 4 >>>>>>> Input
5 5
6 bam file = /tmp/tmp_CFvEQ/files/000/dataset_1.dat 6 bam file = /private/var/folders/df/6xqpqpcd7h73b6jpx9t6cwhw0000gn/T/tmp7dpdo71_/files/7/7/6/dataset_776481e3-00ec-47dd-8143-2213c9f06699.dat
7 gff file = /tmp/tmp_CFvEQ/files/000/dataset_2.dat 7 gff file = features.gtf
8 counting algorithm = uniquely-mapped-reads 8 counting algorithm = uniquely-mapped-reads
9 protocol = non-strand-specific 9 protocol = non-strand-specific
10 5'-3' bias region size = 100
11 5'-3' bias number of top transcripts = 1000
10 12
11 13
12 >>>>>>> Reads alignment 14 >>>>>>> Reads alignment
13 15
14 reads aligned = 100 16 reads aligned = 100