Mercurial > repos > iuc > quast

comparison test-data/test2_report.tab @ 14:3061c8b029e5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit b4d6989e1e185120ce470df5c2b0d93330d5e124
author iuc
date Fri, 05 Aug 2022 15:21:27 +0000
parents 45924fa8d8c5
children
comparison
equal deleted inserted replaced
13:675488238c96 14:3061c8b029e5
9 Reference length 6650 6650 9 Reference length 6650 6650
10 GC (%) 51.28 52.00 10 GC (%) 51.28 52.00
11 Reference GC (%) 52.00 52.00 11 Reference GC (%) 52.00 52.00
12 N50 3980 6650 12 N50 3980 6650
13 NG50 3980 6650 13 NG50 3980 6650
14 N75 1610 6650 14 N90 1120 6650
15 NG75 1610 6650 15 NG90 1120 6650
16 auN 2934.0 6650.0
17 auNG 2960.4 6650.0
16 L50 1 1 18 L50 1 1
17 LG50 1 1 19 LG50 1 1
18 L75 2 1 20 L90 3 1
19 LG75 2 1 21 LG90 3 1
20 # misassemblies 0 0 22 # misassemblies 0 0
21 # misassembled contigs 0 0 23 # misassembled contigs 0 0
22 Misassembled contigs length 0 0 24 Misassembled contigs length 0 0
23 # local misassemblies 0 0 25 # local misassemblies 0 0
24 # scaffold gap ext. mis. 0 0 26 # scaffold gap ext. mis. 0 0
34 # genomic features 7 + 7 part 13 + 1 part 36 # genomic features 7 + 7 part 13 + 1 part
35 Largest alignment 2030 6650 37 Largest alignment 2030 6650
36 Total aligned length 4760 6650 38 Total aligned length 4760 6650
37 NA50 1610 6650 39 NA50 1610 6650
38 NGA50 1610 6650 40 NGA50 1610 6650
39 NA75 - 6650 41 NA90 - 6650
40 NGA75 - 6650 42 NGA90 - 6650
43 auNA 1187.4 6650.0
44 auNGA 1198.1 6650.0
41 LA50 2 1 45 LA50 2 1
42 LGA50 2 1 46 LGA50 2 1
43 LA75 - 1 47 LA90 - 1
44 LGA75 - 1 48 LGA90 - 1
45 K-mer-based compl. (%) 68.09 100.00 49 K-mer-based compl. (%) 68.09 100.00
46 K-mer-based cor. length (%) 100.00 100.00 50 K-mer-based cor. length (%) 100.00 100.00
47 K-mer-based mis. length (%) 0.00 0.00 51 K-mer-based mis. length (%) 0.00 0.00
48 # k-mer-based misjoins 0 0 52 # k-mer-based misjoins 0 0