Mercurial > repos > iuc > quast

diff macros.xml @ 9:45924fa8d8c5 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/quast commit 9e4867db42282a980f1149711159fa811b2d8414"
author iuc
date Mon, 08 Nov 2021 09:03:00 +0000
parents
children 7594365c546b
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Mon Nov 08 09:03:00 2021 +0000
@@ -0,0 +1,26 @@
+<macros>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="@TOOL_VERSION@">quast</requirement>
+            <requirement type="package" version="0.69.8">circos</requirement>
+        </requirements>
+    </xml>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">quast</xref>
+        </xrefs>
+    </xml>
+    <token name="@TOOL_VERSION@">5.0.2</token>
+    <token name="@VERSION_SUFFIX@">2</token>
+    <xml name="gene_thresholds">
+        <param name="gene_thresholds" argument="--gene-thresholds" type="text" value="0,300,1500,3000" label="Comma-separated list of thresholds (in bp) for gene lengths to find with a finding tool"/>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.1093/bioinformatics/bty266</citation>
+            <citation type="doi">10.1093/bioinformatics/btw379</citation>
+            <citation type="doi">10.1093/bioinformatics/btv697</citation>
+            <citation type="doi">10.1093/bioinformatics/btt086</citation>
+        </citations>
+    </xml>
+</macros>
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