Mercurial > repos > iuc > query_tabular

annotate macros.xml @ 7:33d61c89fb8d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author iuc
date Tue, 30 Oct 2018 20:19:30 -0400
parents ad79e7bb1a9e
children 0c95a3f1654f
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
1 <macros>
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
2 <token name="@LINEFILTERS@">
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
3 <![CDATA[
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
4 ## set linefilters to the
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
5 #set $input_filters = []
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
6 #for $fi in $linefilters:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
7 #if $fi.filter.filter_type == 'skip':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
8 #set $skip_lines = None
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
9 #if str($fi.filter.skip_lines) != '':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
10 #set $skip_lines = int($fi.filter.skip_lines)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
11 #elif $tbl.table.metadata.comment_lines and $tbl.table.metadata.comment_lines > 0:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
12 #set $skip_lines = int($tbl.table.metadata.comment_lines)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
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diff changeset
13 #end if
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
14 #if $skip_lines is not None:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
15 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
16 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
17 #set $filter_dict['count'] = $skip_lines
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
18 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
19 #end if
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
20 #elif $fi.filter.filter_type == 'comment':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
21 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
22 #set $filter_dict['filter'] = 'regex'
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
23 #set $filter_dict['pattern'] = '^(%s).*$' % '|'.join([chr(int(x)).replace('|','[|]') for x in (str($fi.filter.comment_char)).split(',')])
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
24 #set $filter_dict['action'] = 'exclude_match'
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
25 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
26 #elif $fi.filter.filter_type == 'regex':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
27 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
28 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
29 #set $filter_dict['pattern'] = str($fi.filter.regex_pattern)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
30 #set $filter_dict['action'] = str($fi.filter.regex_action)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
31 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
32 #elif $fi.filter.filter_type == 'select_columns':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
33 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
34 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
35 #set $filter_dict['columns'] = [int(str($ci).replace('c','')) for $ci in str($fi.filter.columns).split(',')]
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
36 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
37 #elif $fi.filter.filter_type == 'replace':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
38 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
39 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
40 #set $filter_dict['column'] = int(str($fi.filter.column).replace('c',''))
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
41 #set $filter_dict['pattern'] = str($fi.filter.regex_pattern)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
42 #set $filter_dict['replace'] = str($fi.filter.regex_replace)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
43 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
44 #elif str($fi.filter.filter_type).endswith('pend_line_num'):
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
45 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
46 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
47 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
48 #elif str($fi.filter.filter_type).endswith('pend_text'):
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
49 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
50 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
51 #set $filter_dict['column_text'] = str($fi.filter.column_text)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
52 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
53 #elif $fi.filter.filter_type == 'normalize':
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
54 #set $filter_dict = dict()
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
55 #set $filter_dict['filter'] = str($fi.filter.filter_type)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
56 #set $filter_dict['columns'] = [int(str($ci).replace('c','')) for $ci in str($fi.filter.columns).split(',')]
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
57 #set $filter_dict['separator'] = str($fi.filter.separator)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
58 #silent $input_filters.append($filter_dict)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
59 #end if
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
60 #end for
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
61 ]]>
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
iuc
parents:
diff changeset
62 </token>
1
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
63 <token name="@RESULT_HEADER@">
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
64 <![CDATA[
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
65 #if $query_result.header == 'yes':
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
66 #if $query_result.header_prefix:
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
67 #set $header_prefix = chr(int(str($query_result.header_prefix)))
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
68 --comment_char='$header_prefix'
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
69 #end if
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
70 #else
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
71 --no_header
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
72 #end if
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
73 ]]>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
74 </token>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
75 <xml name="comment_char_options">
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
76 <option value="62">&gt;</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
77 <option value="64">@</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
78 <option value="43">+</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
79 <option value="60">&lt;</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
80 <option value="42">*</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
81 <option value="45">-</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
82 <option value="61">=</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
83 <option value="124">|</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
diff changeset
84 <option value="63">?</option>
8a33b442ecd9 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 81f69ad5f39223059c40501e55ac777d3feca845
iuc
parents: 0
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85 <option value="36">$</option>
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86 <option value="46">.</option>
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87 <option value="58">:</option>
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88 <option value="38">&amp;</option>
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89 <option value="37">%</option>
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90 <option value="94">^</option>
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91 <option value="35" selected="true">&#35;</option>
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92 <option value="33">!</option>
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93 </xml>
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94 <xml name="result_results_header_line">
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95 <conditional name="query_result">
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96 <param name="header" type="select" label="include query result column headers">
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97 <option value="yes">Yes</option>
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98 <option value="no">No</option>
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99 </param>
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100 <when value="yes">
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101 <param name="header_prefix" type="select" optional="true" label="Prefix character for column_header line">
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102 <option value="">no comment character prefix</option>
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103 <expand macro="comment_char_options" />
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104 </param>
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105 </when>
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106 <when value="no"/>
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107 </conditional>
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108 </xml>
4
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109 <xml name="sql_query_input">
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110 <param name="sqlquery" type="text" area="true" size="20x80" value="" optional="true" label="SQL Query to generate tabular output">
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111 <help>By default: tables are named: t1,t2,...,tn and columns in each table: c1,c2,...,cn</help>
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112 <sanitizer sanitize="False"/>
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113 <validator type="regex" message="">^(?ims)\s*select\s+.*\s+from\s+.*$</validator>
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114 </param>
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115 </xml>
0
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116 <xml name="macro_line_filters">
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117 <repeat name="linefilters" title="Filter Tabular Input Lines">
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118 <conditional name="filter">
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119 <param name="filter_type" type="select" label="Filter By">
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120 <option value="skip">skip leading lines</option>
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121 <option value="comment">comment char</option>
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122 <option value="regex">by regex expression matching</option>
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123 <option value="select_columns">select columns</option>
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124 <option value="replace">regex replace value in column</option>
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125 <option value="prepend_line_num">prepend a line number column</option>
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126 <option value="append_line_num">append a line number column</option>
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127 <option value="prepend_text">prepend a column with the given text</option>
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128 <option value="append_text">append a column with the given text</option>
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129 <option value="normalize">normalize list columns, replicates row for each item in list</option>
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130 </param>
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131 <when value="skip">
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132 <param name="skip_lines" type="integer" value="" min="0" optional="true" label="Skip lines"
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133 help="Leave blank to use the comment lines metadata for this dataset" />
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134 </when>
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135 <when value="comment">
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136 <param name="comment_char" type="select" display="checkboxes" multiple="True" label="Ignore lines beginning with these characters" help="lines beginning with these are skipped">
1
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137 <expand macro="comment_char_options" />
0
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138 </param>
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139 </when>
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140 <when value="prepend_line_num"/>
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141 <when value="append_line_num"/>
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142 <when value="prepend_text">
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143 <param name="column_text" type="text" value="" label="text for column">
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144 </param>
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145 </when>
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146 <when value="append_text">
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147 <param name="column_text" type="text" value="" label="text for column">
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148 </param>
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149 </when>
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150 <when value="regex">
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151 <param name="regex_pattern" type="text" value="" label="regex pattern">
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152 <sanitizer sanitize="False"/>
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153 </param>
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154 <param name="regex_action" type="select" label="action for regex match">
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155 <option value="exclude_match">exclude line on pattern match</option>
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156 <option value="include_match">include line on pattern match</option>
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157 <option value="exclude_find">exclude line if pattern found</option>
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158 <option value="include_find">include line if pattern found</option>
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159 </param>
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160 </when>
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161 <when value="select_columns">
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162 <param name="columns" type="text" value="" label="enter column numbers to keep"
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163 help="example: 1,4,2 or c1,c4,c2(selects the first,fourth, and second columns)">
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164 <validator type="regex" message="Column ordinal positions separated by commas">^(c?[1-9]\d*)(,c?[1-9]\d*)*$</validator>
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165 </param>
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166 </when>
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167 <when value="replace">
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168 <param name="column" type="text" value="" label="enter column number to replace"
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169 help="example: 1 or c1 (selects the first column)">
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170 <validator type="regex" message="Column ordinal position separated by commas">^(c?[1-9]\d*)$</validator>
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171 </param>
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172 <param name="regex_pattern" type="text" value="" label="regex pattern">
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173 <sanitizer sanitize="False"/>
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174 </param>
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175 <param name="regex_replace" type="text" value="" label="replacement expression">
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176 <sanitizer sanitize="False"/>
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177 </param>
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178 </when>
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179 <when value="normalize">
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180 <param name="columns" type="text" value="" label="enter column numbers to normalize">
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181 <help><![CDATA[
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182 example: 2,4 or c2,c4 (selects the second, and fourth columns)
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183 If multiple columns are selected, they should have the same length and separator on each line
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184 ]]></help>
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185 <validator type="regex" message="Column ordinal positions separated by commas">^(c?[1-9]\d*)(,c?[1-9]\d*)*$</validator>
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186 </param>
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187 <param name="separator" type="text" value="," label="List item delimiter in column">
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188 <sanitizer sanitize="False"/>
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189 <validator type="regex" message="Anything but TAB or Newline">^[^\t\n\r\f\v]+$</validator>
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190 </param>
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191 </when>
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192 </conditional>
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193 </repeat>
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194 </xml>
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195
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196 <token name="@LINEFILTERS_HELP@">
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197 <![CDATA[
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198 **Input Line Filters**
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199
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200 As a tabular file is being read, line filters may be applied.
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201
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202 ::
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203
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204 - skip leading lines skip the first *number* of lines
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205 - comment char omit any lines that start with the specified comment character
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206 - by regex expression matching *include/exclude* lines the match the regex expression
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207 - select columns choose to include only selected columns in the order specified
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208 - regex replace value in column replace a field in a column using a regex substitution (good for date reformatting)
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209 - prepend a line number column each line has the ordinal value of the line read by this filter as the first column
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210 - append a line number column each line has the ordinal value of the line read by this filter as the last column
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211 - prepend a text column each line has the text string as the first column
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212 - append a text column each line has the text string as the last column
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213 - normalize list columns replicates the line for each item in the specified list *columns*
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214 ]]>
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215 </token>
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216
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217 <token name="@LINEFILTERS_HELP_EXAMPLE@">
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218 <![CDATA[
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219 **Line Filtering Example**
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220 *(Six filters are applied as the following file is read)*
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221
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222 ::
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223
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224 Input Tabular File:
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225
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226 #People with pets
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227 Pets FirstName LastName DOB PetNames PetType
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228 2 Paula Brown 24/05/78 Rex,Fluff dog,cat
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229 1 Steven Jones 04/04/74 Allie cat
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230 0 Jane Doe 24/05/78
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231 1 James Smith 20/10/80 Spot
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232
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233
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234 Filter 1 - append a line number column:
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235
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236 #People with pets 1
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237 Pets FirstName LastName DOB PetNames PetType 2
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238 2 Paula Brown 24/05/78 Rex,Fluff dog,cat 3
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239 1 Steven Jones 04/04/74 Allie cat 4
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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240 0 Jane Doe 24/05/78 5
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241 1 James Smith 20/10/80 Spot 6
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242
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243 Filter 2 - by regex expression matching [include]: '^\d+' (include lines that start with a number)
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244
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245 2 Paula Brown 24/05/78 Rex,Fluff dog,cat 3
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246 1 Steven Jones 04/04/74 Allie cat 4
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247 0 Jane Doe 24/05/78 5
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248 1 James Smith 20/10/80 Spot 6
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249
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250 Filter 3 - append a line number column:
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251
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252 2 Paula Brown 24/05/78 Rex,Fluff dog,cat 3 1
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253 1 Steven Jones 04/04/74 Allie cat 4 2
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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254 0 Jane Doe 24/05/78 5 3
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255 1 James Smith 20/10/80 Spot 6 4
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256
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257 Filter 4 - regex replace value in column[4]: '(\d+)/(\d+)/(\d+)' '19\3-\2-\1' (convert dates to sqlite format)
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258
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259 2 Paula Brown 1978-05-24 Rex,Fluff dog,cat 3 1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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260 1 Steven Jones 1974-04-04 Allie cat 4 2
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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261 0 Jane Doe 1978-05-24 5 3
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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262 1 James Smith 1980-10-20 Spot 6 4
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263
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264 Filter 5 - normalize list columns[5,6]:
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265
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266 2 Paula Brown 1978-05-24 Rex dog 3 1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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267 2 Paula Brown 1978-05-24 Fluff cat 3 1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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268 1 Steven Jones 1974-04-04 Allie cat 4 2
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269 0 Jane Doe 1978-05-24 5 3
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270 1 James Smith 1980-10-20 Spot 6 4
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271
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272 Filter 6 - append a line number column:
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273
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274 2 Paula Brown 1978-05-24 Rex dog 3 1 1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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275 2 Paula Brown 1978-05-24 Fluff cat 3 1 2
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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276 1 Steven Jones 1974-04-04 Allie cat 4 2 3
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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277 0 Jane Doe 1978-05-24 5 3 4
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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278 1 James Smith 1980-10-20 Spot 6 4 5
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279
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280 ]]>
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281 </token>
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282
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283 <token name="@QUERY_HELP@">
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284 <![CDATA[
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285
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286 For help in using SQLite_ see: http://www.sqlite.org/docs.html
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287
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288 **NOTE:** input for SQLite dates input field must be in the format: *YYYY-MM-DD* for example: 2015-09-30
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289
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290 See: http://www.sqlite.org/lang_datefunc.html
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291
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292 **Example**
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293
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294 Given 2 tabular datasets: *customers* and *sales*
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295
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296 Dataset *customers*
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297
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298 Table name: "customers"
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299
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300 Column names: "CustomerID,FirstName,LastName,Email,DOB,Phone"
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301
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302 =========== ========== ========== ===================== ========== ============
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303 #CustomerID FirstName LastName Email DOB Phone
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304 =========== ========== ========== ===================== ========== ============
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305 1 John Smith John.Smith@yahoo.com 1968-02-04 626 222-2222
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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306 2 Steven Goldfish goldfish@fishhere.net 1974-04-04 323 455-4545
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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307 3 Paula Brown pb@herowndomain.org 1978-05-24 416 323-3232
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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308 4 James Smith jim@supergig.co.uk 1980-10-20 416 323-8888
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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309 =========== ========== ========== ===================== ========== ============
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310
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311 Dataset *sales*
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312
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313 Table name: "sales"
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314
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315 Column names: "CustomerID,Date,SaleAmount"
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316
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317 ============= ============ ============
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318 #CustomerID Date SaleAmount
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319 ============= ============ ============
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320 2 2004-05-06 100.22
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321 1 2004-05-07 99.95
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322 3 2004-05-07 122.95
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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323 3 2004-05-13 100.00
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324 4 2004-05-22 555.55
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325 ============= ============ ============
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326
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327 The query
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328
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329 ::
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330
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331 SELECT FirstName,LastName,sum(SaleAmount) as "TotalSales"
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332 FROM customers join sales on customers.CustomerID = sales.CustomerID
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333 GROUP BY customers.CustomerID ORDER BY TotalSales DESC;
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334
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335 Produces this tabular output:
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336
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337 ========== ======== ==========
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338 #FirstName LastName TotalSales
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339 ========== ======== ==========
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340 James Smith 555.55
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341 Paula Brown 222.95
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342 Steven Goldfish 100.22
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343 John Smith 99.95
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344 ========== ======== ==========
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345
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346
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347 If the optional Table name and Column names inputs are not used, the query would be:
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348
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349 ::
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350
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351 SELECT t1.c2 as "FirstName", t1.c3 as "LastName", sum(t2.c3) as "TotalSales"
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352 FROM t1 join t2 on t1.c1 = t2.c1
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353 GROUP BY t1.c1 ORDER BY TotalSales DESC;
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354
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355 You can selectively name columns, e.g. on the customers input you could just name columns 2,3, and 5:
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356
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357 Column names: ,FirstName,LastName,,BirthDate
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358
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359 Results in the following data base table
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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360
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361 =========== ========== ========== ===================== ========== ============
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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362 #c1 FirstName LastName c4 BirthDate c6
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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363 =========== ========== ========== ===================== ========== ============
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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364 1 John Smith John.Smith@yahoo.com 1968-02-04 626 222-2222
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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365 2 Steven Goldfish goldfish@fishhere.net 1974-04-04 323 455-4545
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366 3 Paula Brown pb@herowndomain.org 1978-05-24 416 323-3232
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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367 4 James Smith jim@supergig.co.uk 1980-10-20 416 323-8888
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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368 =========== ========== ========== ===================== ========== ============
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369
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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370
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371 Regular_expression_ functions are included for:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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372
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373 ::
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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374
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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375 matching: re_match('pattern',column)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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376
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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377 SELECT t1.FirstName, t1.LastName
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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378 FROM t1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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379 WHERE re_match('^.*\.(net|org)$',c4)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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380
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381 Results:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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382
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383 =========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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384 #FirstName LastName
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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385 =========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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386 Steven Goldfish
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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387 Paula Brown
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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388 =========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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389
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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390
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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391 ::
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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392
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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393 searching: re_search('pattern',column)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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394 substituting: re_sub('pattern','replacement,column)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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395
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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396 SELECT t1.FirstName, t1.LastName, re_sub('^\d{2}(\d{2})-(\d\d)-(\d\d)','\3/\2/\1',BirthDate) as "DOB"
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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397 FROM t1
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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398 WHERE re_search('[hp]er',c4)
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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399
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400 Results:
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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401
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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402
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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403 =========== ========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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404 #FirstName LastName DOB
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405 =========== ========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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406 Steven Goldfish 04/04/74
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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407 Paula Brown 24/05/78
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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408 James Smith 20/10/80
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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409 =========== ========== ==========
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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410
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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411 .. _Regular_expression: https://docs.python.org/release/2.7/library/re.html
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412 .. _SQLite: http://www.sqlite.org/index.html
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413 .. _SQLite_functions: http://www.sqlite.org/docs.html
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414
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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415
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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416 ]]>
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417 </token>
6
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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418 <xml name="citations">
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419 <citations>
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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420 <citation type="doi">10.12688/f1000research.16450.1</citation>
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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421 <yield />
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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422 </citations>
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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423 </xml>
ad79e7bb1a9e planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 43d0f694b024cf9b1f0e26d803d3f19f38c95ee9-dirty
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424
0
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425
3708ff0198b7 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 74915fc9cee746bbce1c4b507e13231259de177d
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426 </macros>
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427