Mercurial > repos > iuc > raceid_diffgene

comparison macros.xml @ 0:ea8215239735 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid commit 39918bfdb08f06862ca395ce58a6f5e4f6dd1a5e
author iuc
date Sat, 03 Mar 2018 17:33:56 -0500
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-1:000000000000 0:ea8215239735
1 <?xml version="1.0"?>
2 <macros>
3 <xml name="citations">
4 <citations>
5 <citation type="doi">10.1038/nature14966</citation>
6 </citations>
7 </xml>
8 <xml name="requirements">
9 <requirements>
10 <requirement type="package" >r</requirement>
11 <requirement type="package" >r-tsne</requirement>
12 <requirement type="package" >r-pheatmap</requirement>
13 <requirement type="package" >r-mass</requirement>
14 <requirement type="package" >r-mclust</requirement>
15 <requirement type="package" >r-flexmix</requirement>
16 <requirement type="package" >r-lattice</requirement>
17 <requirement type="package" >r-fpc</requirement>
18 <requirement type="package" >r-rcolorbrewer</requirement>
19 <requirement type="package" >r-permute</requirement>
20 <requirement type="package" >r-amap</requirement>
21 <requirement type="package" >r-locfit</requirement>
22 </requirements>
23 </xml>
24 <token name="@VERSION@">1.0</token>
25 <token name="@SCRIPT_DIR@">$__tool_directory__/scripts</token>
26
27 <!-- Set hidden/retired outputs -->
28 <token name="@out_rdat_filter@">out_rdat_filter.rds</token>
29 <token name="@out_rdat_kmeans@">out_rdat_kmeans.rds</token>
30 <token name="@out_rdat_outlier@">out_rdat_outlier.rds</token>
31
32 <!-- Set hidden/retired inputs -->
33 <!-- tsne -> outlier -> kmeans -> filter -->
34 <token name="@inp_rdat_kmeans@">out_rdat_filter.rds</token>
35 <token name="@inp_rdat_outlier@">out_rdat_kmeans.rds</token>
36 <token name="@inp_rdat_tsne@">out_rdat_outlier.rds</token>
37 </macros>