Mercurial > repos > iuc > raceid_filtnormconf
diff raceid_filtnormconf.xml @ 8:c891d8b33ede draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raceid3 commit 455bad7eca54164f95755174904842907846bb42"
| author | iuc |
|---|---|
| date | Mon, 20 Dec 2021 10:12:14 +0000 |
| parents | d45f092caf24 |
| children | 8b917923f7d4 |
line wrap: on
line diff
--- a/raceid_filtnormconf.xml Thu Dec 02 16:22:21 2021 +0000 +++ b/raceid_filtnormconf.xml Mon Dec 20 10:12:14 2021 +0000 @@ -1,4 +1,4 @@ -<tool id="raceid_filtnormconf" name="Initial processing using RaceID" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" > +<tool id="raceid_filtnormconf" name="Initial processing using RaceID" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>performs filtering, normalisation, and confounder removal to generate a normalised and filtered count matrix of single-cell RNA data</description> <macros> <import>macros.xml</import> @@ -56,7 +56,7 @@ <outputs> <data name="outtable" format="tabular" label="${tool.name} on ${on_string}: Normalised Matrix" /> <data name="outpdf" format="pdf" label="${tool.name} on ${on_string}: PDF Report" /> - <data name="outrdat" format="rdata" label="${tool.name} on ${on_string}: RDS" /> + <data name="outrdat" format="rds" label="${tool.name} on ${on_string}: RDS" /> <data name="outlog" format="txt" label="${tool.name} on ${on_string}: Metrics" /> </outputs> <tests> @@ -81,7 +81,7 @@ <param name="minexpr" value="1" /> <param name="minnumber" value="3" /> </section> - <output name="outrdat" value="matrix.filter.rdat" compare="sim_size" delta="1000" /> + <output name="outrdat" value="matrix.filter.rdat" compare="sim_size" /> <output name="outpdf" value="matrix.filter.pdf" compare="sim_size" delta="10" /> </test> <test expect_num_outputs="4">