comparison raxml.xml @ 4:73a469f7dc96 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/raxml commit 41f2f31556bf0dc676aff59ba74d9e5939a43caf"
author iuc
date Sun, 19 Apr 2020 16:44:27 -0400
parents 14eb2acf30e3
children 29ff6a849eac
comparison
equal deleted inserted replaced
3:14eb2acf30e3 4:73a469f7dc96
1 <tool id="raxml" name="Phyogenetic reconstruction with RaXML" version="8.2.4+galaxy2"> 1 <tool id="raxml" name="Phyogenetic reconstruction with RAxML" version="8.2.4+galaxy2">
2 <description>- Maximum Likelihood based inference of large phylogenetic trees</description> 2 <description>- Maximum Likelihood based inference of large phylogenetic trees</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="8.2.4">raxml</requirement> 4 <requirement type="package" version="8.2.4">raxml</requirement>
5 <requirement type="package" version="3.6">python</requirement> 5 <requirement type="package" version="3.6">python</requirement>
6 </requirements> 6 </requirements>
115 --multiple_model '$selExtraOpts.multiple_model' 115 --multiple_model '$selExtraOpts.multiple_model'
116 #end if 116 #end if
117 #end if 117 #end if
118 ]]></command> 118 ]]></command>
119 <inputs> 119 <inputs>
120 <param name="infile" argument="-s" type="data" format="fasta,phylip" label="Source file" /> 120 <param name="infile" argument="-s" type="data" format="fasta,phylip" label="Source file with aligned sequences"
121 help="At least four aligned genomes are needed for RAxML." />
121 <conditional name="search_model_selector"> 122 <conditional name="search_model_selector">
122 <param name="model_type" type="select" label="Model type"> 123 <param name="model_type" type="select" label="Model type">
123 <option value="nucleotide" selected="true">Nucleotide</option> 124 <option value="nucleotide" selected="true">Nucleotide</option>
124 <option value="aminoacid">Amino Acid</option> 125 <option value="aminoacid">Amino Acid</option>
125 <option value="binary">Binary</option> 126 <option value="binary">Binary</option>