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comparison README.rst @ 3:318b2a9d54dd draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 0d434bca5083e908114d93e11094e48f49b98ed1
author iuc
date Fri, 21 Apr 2017 07:58:59 -0400
parents ace9f5a2b40f
children d681e989ac95
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2:ace9f5a2b40f 3:318b2a9d54dd
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2 System Requirements 2 System Requirements
3 =================== 3 ===================
4 4
5 - **Memory**: To run efficiently, RNA-STAR requires enough free memory to 5 - **Memory**: To run efficiently, RNA-STAR requires enough free memory to
6 hold the SA-indexed reference genome in RAM. For Human Genome hg19 this is 6 hold the SA-indexed reference genome in RAM. For Human Genome hg19 this
7 index about 27GB and running RNA-STAR requires approximately ~30GB of RAM. 7 index is about 27GB and running RNA-STAR requires approximately ~30GB of RAM.
8 For custom genomes, the rule of thub is to multiply the size of the
9 reference FASTA file by 9 to estimated required amount of RAM.