Mercurial > repos > iuc > rgrnastar

comparison macros.xml @ 14:b9e04854e2bb draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
author iuc
date Thu, 28 Nov 2019 15:56:07 -0500
parents 850f3679b9b4
children 5ec75f5dae3c
comparison
equal deleted inserted replaced
13:850f3679b9b4 14:b9e04854e2bb
1 <macros> 1 <macros>
2 <!-- REMEMBER to bump the version of rna_star_index_builder_data_manager 2 <!-- REMEMBER to bump the version of rna_star_index_builder_data_manager
3 whenever you make changes to the following two version tokens! 3 whenever you make changes to the following two version tokens!
4 The data manager uses a symlink to this macro file to keep the versions in 4 The data manager uses a symlink to this macro file to keep the STAR and
5 sync. --> 5 the index versions in sync, but you should manually adjust the +galaxy
6 version number. -->
6 <!-- STAR version to be used --> 7 <!-- STAR version to be used -->
7 <token name="@VERSION@">2.7.2b</token> 8 <token name="@VERSION@">2.7.2b</token>
8 <!-- STAR index version compatible with this version of STAR 9 <!-- STAR index version compatible with this version of STAR
9 This is the STAR version that introduced the index structure expected 10 This is the STAR version that introduced the index structure expected
10 by the current version. 11 by the current version.
16 17
17 <xml name="requirements"> 18 <xml name="requirements">
18 <requirements> 19 <requirements>
19 <requirement type="package" version="@VERSION@">star</requirement> 20 <requirement type="package" version="@VERSION@">star</requirement>
20 <requirement type="package" version="1.9">samtools</requirement> 21 <requirement type="package" version="1.9">samtools</requirement>
22 <yield />
21 </requirements> 23 </requirements>
22 </xml> 24 </xml>
23 25
24 <xml name="index_selection" token_with_gene_model="0"> 26 <xml name="index_selection" token_with_gene_model="0">
25 <param argument="--genomeDir" name="genomeDir" type="select" 27 <param argument="--genomeDir" name="genomeDir" type="select"