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comparison README.rst @ 4:d681e989ac95 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 4c4199b39a51216c83594762baadcadd81c519b2
author iuc
date Fri, 09 Jun 2017 07:34:30 -0400
parents 318b2a9d54dd
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3:318b2a9d54dd 4:d681e989ac95
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5 - **Memory**: To run efficiently, RNA-STAR requires enough free memory to 5 - **Memory**: To run efficiently, RNA-STAR requires enough free memory to
6 hold the SA-indexed reference genome in RAM. For Human Genome hg19 this 6 hold the SA-indexed reference genome in RAM. For Human Genome hg19 this
7 index is about 27GB and running RNA-STAR requires approximately ~30GB of RAM. 7 index is about 27GB and running RNA-STAR requires approximately ~30GB of RAM.
8 For custom genomes, the rule of thub is to multiply the size of the 8 For custom genomes, the rule of thumb is to multiply the size of the
9 reference FASTA file by 9 to estimated required amount of RAM. 9 reference FASTA file by 9 to estimate the required amount of RAM.