Mercurial > repos > iuc > rgrnastar

comparison test-data/rnastar_test.log @ 30:4014de1b6daf draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 2b3fa63863a366beef057c7f75ccbcaf0c280151
author iuc
date Tue, 27 Aug 2024 14:11:16 +0000
parents d82339e37e8e
children
comparison
equal deleted inserted replaced
29:b0f2be869d6d 30:4014de1b6daf
1 Started job on | .* 1 Started job on | .*
2 Started mapping on | .* 2 Started mapping on | .*
3 Finished on | .* 3 Finished on | .*
4 Mapping speed, Million of reads per hour | .* 4 Mapping speed, Million of reads per hour | .*
5 5
6 Number of input reads | 100 6 Number of input reads | 15447
7 Average input read length | 75 7 Average input read length | 119
8 UNIQUE READS: 8 UNIQUE READS:
9 Uniquely mapped reads number | 99 9 Uniquely mapped reads number | 150
10 Uniquely mapped reads % | 99.00% 10 Uniquely mapped reads % | 0.97%
11 Average mapped length | 74.65 11 Average mapped length | 105.11
12 Number of splices: Total | 52 12 Number of splices: Total | 131
13 Number of splices: Annotated (sjdb) | 0 13 Number of splices: Annotated (sjdb) | 0
14 Number of splices: GT/AG | 52 14 Number of splices: GT/AG | 100
15 Number of splices: GC/AG | 0 15 Number of splices: GC/AG | 6
16 Number of splices: AT/AC | 0 16 Number of splices: AT/AC | 1
17 Number of splices: Non-canonical | 0 17 Number of splices: Non-canonical | 24
18 Mismatch rate per base, % | 2.00% 18 Mismatch rate per base, % | 6.68%
19 Deletion rate per base | 0.00% 19 Deletion rate per base | 0.04%
20 Deletion average length | 0.00 20 Deletion average length | 1.17
21 Insertion rate per base | 0.00% 21 Insertion rate per base | 0.04%
22 Insertion average length | 0.00 22 Insertion average length | 1.50
23 MULTI-MAPPING READS: 23 MULTI-MAPPING READS:
24 Number of reads mapped to multiple loci | 1 24 Number of reads mapped to multiple loci | 451
25 % of reads mapped to multiple loci | 1.00% 25 % of reads mapped to multiple loci | 2.92%
26 Number of reads mapped to too many loci | 0 26 Number of reads mapped to too many loci | 58
27 % of reads mapped to too many loci | 0.00% 27 % of reads mapped to too many loci | 0.38%
28 UNMAPPED READS: 28 UNMAPPED READS:
29 Number of reads unmapped: too many mismatches | 0
29 % of reads unmapped: too many mismatches | 0.00% 30 % of reads unmapped: too many mismatches | 0.00%
30 % of reads unmapped: too short | 0.00% 31 Number of reads unmapped: too short | 7912
31 % of reads unmapped: other | 0.00% 32 % of reads unmapped: too short | 51.22%
33 Number of reads unmapped: other | 6876
34 % of reads unmapped: other | 44.51%
32 CHIMERIC READS: 35 CHIMERIC READS:
33 Number of chimeric reads | 0 36 Number of chimeric reads | 0
34 % of chimeric reads | 0.00% 37 % of chimeric reads | 0.00%