Mercurial > repos > iuc > rgrnastar

diff tool_dependencies.xml @ 0:b2326241bb09 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 13522d2ad2efbb8dab405723f491bd1a6591e3ef
author iuc
date Mon, 18 May 2015 13:34:13 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon May 18 13:34:13 2015 -0400
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="rnastar" version="2.4.0d">
+        <repository changeset_revision="54c96a529c59" name="package_rnastar_2_4_0d" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+        <readme>
+            Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/
+            STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library
+        </readme>
+    </package>
+    <package name="samtools" version="0.1.19">
+        <repository changeset_revision="96aab723499f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>