Mercurial > repos > iuc > rgrnastar

diff test-data/test-cache/tophat-test/genomeParameters.txt @ 10:d82339e37e8e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 686574b0392e554b75035a9b79bc919dfda9ab97"
author iuc
date Thu, 15 Aug 2019 01:54:13 -0400
parents
children 5ec75f5dae3c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-cache/tophat-test/genomeParameters.txt	Thu Aug 15 01:54:13 2019 -0400
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+### STAR   --runMode genomeGenerate   --genomeDir test-cache/tophat_test/   --genomeFastaFiles tophat_test.fa      --genomeSAindexNbases 5
+### GstrandBit 32
+versionGenome	2.7.1a
+genomeFastaFiles	tophat_test.fa 
+genomeSAindexNbases	5
+genomeChrBinNbits	18
+genomeSAsparseD	1
+sjdbOverhang	0
+sjdbFileChrStartEnd	- 
+sjdbGTFfile	-
+sjdbGTFchrPrefix	-
+sjdbGTFfeatureExon	exon
+sjdbGTFtagExonParentTranscript	transcript_id
+sjdbGTFtagExonParentGene	gene_id
+sjdbInsertSave	Basic
+genomeFileSizes	262144 5366