Mercurial > repos > iuc > rgrnastar

view test-data/test-cache/tophat-test/genomeParameters.txt @ 14:b9e04854e2bb draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 57f71aa633a43ab02bbf05acd0c6d7f406e01f1e"
author iuc
date Thu, 28 Nov 2019 15:56:07 -0500
parents d82339e37e8e
children 5ec75f5dae3c
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### STAR   --runMode genomeGenerate   --genomeDir test-cache/tophat_test/   --genomeFastaFiles tophat_test.fa      --genomeSAindexNbases 5
### GstrandBit 32
versionGenome	2.7.1a
genomeFastaFiles	tophat_test.fa 
genomeSAindexNbases	5
genomeChrBinNbits	18
genomeSAsparseD	1
sjdbOverhang	0
sjdbFileChrStartEnd	- 
sjdbGTFfile	-
sjdbGTFchrPrefix	-
sjdbGTFfeatureExon	exon
sjdbGTFtagExonParentTranscript	transcript_id
sjdbGTFtagExonParentGene	gene_id
sjdbInsertSave	Basic
genomeFileSizes	262144 5366